Argentina anserina (silverweed cinquefoil): 126792506
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Entry
126792506 CDS
T10558
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase lambda-like
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans03410
Base excision repair
aans03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
126792506
03450 Non-homologous end-joining
126792506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aans03400
]
126792506
Enzymes [BR:
aans01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
126792506
DNA repair and recombination proteins [BR:
aans03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
126792506
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
126792506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_8
NTP_transf_2
BRCT
Cdd1
HHH_5
IMS_HHH_1
IMS_HHH
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
126792506
NCBI-ProteinID:
XP_050374873
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All DBs
Position
4:complement(26683712..26688842)
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AA seq
489 aa
AA seq
DB search
MVSSLTECDPDGMFAGMVVYLVHSGVMYRRLQIWKQKLVQMGATIELRVTKNVTHILAMN
PEALLQEAGSERLEFFKGKVVLYXWLQDSLSSGEKAPEELYLVELEAEKSCTENETPNPX
KTKPSPENLPHTPSPQTAKALNEDQVTPLQSLSPYSPPDLNSNITQVFGKLINIYRALGD
DRRSFSYSKAIPIIERLPFKIQSQEQVKGLPNIGKSMQDHIQEIVTTGKLSKLEHFETDE
KVRTISLFGEVWGVGPATAQKLYEKGHRTLDDLKTEESLTSSQKLGLKYFDDIKQRIPRN
EAQEMELLLKKAGEDILPGVDIVCGGSYRRGKAPCGDLDIIITHPDGNSHKGFLPKYVKH
LKDMKFLREDLVYSIHSEEGIDSGVDTYFGLCTYPGRELRHRIDIKVYPREIYAFALIHW
TGDDVLNRRLRVLAESKGFLLDDDGLFPATRGSLGQRGMRGSAALKFDTEKEVFEFLGFP
WLEPQERNL
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggtgagttcactaaccgaatgcgatccagacggaatgttcgccggaatggtcgtctac
ttagtccacagtggagtcatgtaccgtcgattacagatatggaagcagaaactggtccaa
atgggagccactatagaattgagagtaaccaaaaacgtcacacacatattggctatgaac
ccagaagctctcttacaagaagcgggcagtgagagattggaattctttaaagggaaagtt
gtgctatattagtggctacaggatagcttgagctcaggtgaaaaggcacctgaggaattg
taccttgtagaattggaagcagaaaagtcctgtactgaaaatgaaactccaaatccctaa
aagactaaaccttctcctgagaatttacctcacactccaagccctcaaactgccaaagct
ctgaatgaggatcaggtcacaccattgcagtcattgtcaccctacagcccacctgatttg
aacagcaacataactcaggtatttgggaagcttattaacatttatagagccttgggcgat
gatcggagatcctttagctattccaaggctataccaattatagagagattgccgttcaag
atacaaagtcaggaacaagttaaaggcttgcctaacattggaaagtcaatgcaagaccat
attcaggaaattgtgactacagggaagctatccaagttggagcacttcgaaacggatgaa
aaggtacgaactatcagcttatttggggaagtttggggagttggtccggctactgcacaa
aaattgtatgagaaaggacaccgcacattagatgatctgaagactgaagaatcattaaca
agttcacagaagttaggtttaaaatattttgatgatatcaaacaaagaattccacgaaat
gaggctcaggagatggaacttctactaaagaaagctggggaagatattttgcctggagtg
gacattgtatgtggaggatcatatagacgtgggaaagctccttgtggggatctggacatt
ataattacacatcctgatggaaacagtcataaaggatttttaccaaaatatgtaaagcat
ttaaaggatatgaagtttctgagggaggatctggtttacagcatacacagtgaggagggt
attgattctggcgttgacacatattttgggctttgcacatatcctggacgagagctgcgc
caccgcattgatatcaaggtttacccacgtgaaatatatgcatttgcgctaatacattgg
actggcgatgatgtattgaataggaggttgagagttctagctgaatctaaaggattcctt
cttgatgatgatggcctatttccagctacacggggctctctcggtcagcggggcatgaga
ggtagcgcagctttgaaatttgacactgaaaaggaggtgtttgagtttctcgggtttcct
tggcttgaaccacaagagagaaatctgtga
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