Argentina anserina (silverweed cinquefoil): 126792594
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Entry
126792594 CDS
T10558
Name
(RefSeq) uncharacterized protein LOC126792594
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
aans Argentina anserina (silverweed cinquefoil)
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aans04131
]
126792594
Membrane trafficking [BR:
aans04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
126792594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_N
Vps62
VPS13_M
ATG2_CAD
PH
C2
UPF0489
Motif
Other DBs
NCBI-GeneID:
126792594
NCBI-ProteinID:
XP_050374958
LinkDB
All DBs
Position
4:complement(18391430..18418967)
Genome browser
AA seq
2748 aa
AA seq
DB search
MFEAHVLHLLRRYLGEYVEGLSVEALRISVWQGDVVLKDLKLKAEALNSLKLPVTVKAGF
IGTITLKVPWKSLGKEPVIVLVDRVFILAHPVTDGSTLKEDRDKLFEAKLQEIEEAESAT
LEAISKSKMGSQSSGNSWLGSLIATIIGNLKISISNVHIRYEDLVSNPGHPFCSGATLAK
LAAVTMDEEGKETFDTSGALDKLRKSLQLERLAMYHDSDSVPWKIDKNWGDLAPKEWVEI
FEDGIREPADDHVMVSKWAMNRKYLVSPINGVLKYHRVGNQERNDPDVPFENASLVLSDV
SLTITEAQYRDWIKLFEVVSRYKRYVEFSHLRPALAVSAGPSMWWHYAAQAGLQQKKMCY
RFSWDRIRVLCQLRRRYIQLYAGFLQHPTNVDNAEIREIEKDLDSKVILLWRLLAHAKVE
SVKSKEAAEQRMLQKKSWFSFKWRTPDESAEDISDGSQSPEERLTKEEWQAINKLLSYQP
DETLASQLDMQNMIRFMVTVSVNRAAARIVDINQTEILCCKFEQLQVSTKFKHQSTYCDV
SLRFYGLYAPEGSLAQSVSSKRKANALTASFVYSPVGENVDWRLSATISPCHVTVLMESC
DRFLDFVKRSNAVSPTVTLETATALQMQIEKVTRRAQEQFQMVLEEQSRFALDIDLDAPK
VRVPIRTNGSSKCDSHFLLDLGHFTLQTKDTQHDEQKKNLYSRFFITGRDIAAFFTDCGV
DRQICTLESPDSDNHPPVSPENADNFYPLIDRCGMALLVDQIKVPHPSYPSMCVSIQVPN
LGVHFSPLRFQRLMKLSNILYGNLENIGQPAVDDFQAENAPWNPADLYTDARILVWKGIG
NSVATWQPCFLVLSGTNIFVLESEKSQSYQRYSSMAGRQVCEVPRTSIGGSPFCLAVIHR
GMDTQKALESSSSLIIEFRGEEEKVVWLKGLVQATYQASAPPSVDILGKTSDHAAEFGEP
QTSKSKTADLVINGALVETKISIYGKMGDKNAEEFDETLMLEVLASGGQVHMIRWEGDMT
LNTKLHSLKIKDELQGRLSTTPQYLACSVLKSDNLVSSPGIVDPHWKEMSVLLHEEDDTY
TDALPDFMSVSDVGFGSPVSDTVSRVSIEDIHDAAGSVSASASAEGLVLEKNLLKAKCIS
AEEFYEAEGSDYSNFVSVTFSTLSSSSPDYDGTDTQMSLCMSKLEFFCNRPTLVALIDFG
LDLSSVYSAESTDITEGSDDKSLTNKEKTEEIGRVKGLLGYGKGRVVFYLNMNVDSVTVF
LNKEDASLLATFVQESFVLDLKVHPSSLSIEGTLGNFRLRDMSLGEDNCWAWLCDIRNPD
VESLIKFNFKSYSAEDDDYEGYDYSLCGRFAAVRIVFLYRFIQEITAYFMELATPHTEEA
IKLVDKVGGFEWLIEKYEIDGATALKLDLSLDTPIIIVPKNSTSNDFIQLDLGQLQVTNE
FSWHGSPEKDPSAVHIDVLHAEILGINMSVGIEGHMGRSMIREGKGFDVYVRRSLRDVFK
KVPTFSLEVKVGLLHAVMSDKEYKVILDCAYTNLCEEPKLPPSFRGGKSDSKDKIRLLVD
KVNMNSQILLSRTVTIVAVVVDHALLELYNCIHAESPFAQIALEGLWVSYRMTSLSETDL
YITISKFSVVDIRPDTKPEMRLMLGSSTDAFKQVSSGSLPFFLNRGSFRRTDSDAGFYGD
SPISTMLLMDYRCRTSTQLFVIRIQQPRVLVVADFLLAVGEFFVPALGTITGREEVMDHN
NDPIGKYSSIVFTEPTYKQTEDVVHLSPTRQLVADLLSIDEYTYDGCGKTIHLSEEMDAK
ELQSTRPRPIIIIGRGKRLRFMNVKVENGSLLRKYTYLNNDSSYSVSFEDGVDIELLESS
SCDGDKKSLEYLHESPDSSNLSNSESDPNKIQSFSFETQVVSPEFTFYDGSKSSLDDSYG
EKLLRAKLDFSFMYASKENDTWIRALVKDLTVEAGSGLVVLDPVDISGGYTSVKDKTSMS
LLSTDICFHLSLSAISLISNLQSQATAALQYGNSTPLAPCTNFDRIWVSPKENGSCFGLT
FWRPRAPSNYVILGDCVTSKPIPPSQAVMAVSNTYGRVCKPTGFNLIGLFSAIQGFLEGD
SAITTDCSLWMPIAPPGYTAMGSVANIGKEPPPTHIVYCIRSDLVTSTTFIECLFCSPSN
PQFASGFSIWRVENALGSFYAHSSTECPSKDNCCNLNHLLLWNTSRHQSSAKERSSDLAV
VENRESQESKNQSAHTSGWDVVRSISKATKCYISTPNFERIWWDKGSDIRRPVSIWRPIP
RRGYAILGDSIIEGLEPPAVGIIFKADDPEISAKPVQFTKVAHVVGKGFDEAFFWYPIAP
PGYASIGCIVSRIDEPPPINSFCCPRMDLVSQANILEVPISRSSASKGSQCWSIWRVENQ
ACTFLARGDLKKPSSRLAYAIGDSMKPKTRENITAEVKLRCLSVTVLDSLCGMMTPLFDM
TITNIKLATHGRMEAMNAVLISSIAASTFNTQLEAWEPLVEPFDGIFKLETYDTNLHSPS
EFGKTVRIAATSIVNLNVSAANLETCIGTILSWRRQLDLERKAKKITEEACGLNEQEENQ
TLSALDDDDFQTVMVENKLGCDIYLKKVEQNSDMVNQLHHGDCVSVWVPPPRFSDRLNVA
DESKEARLYVAIQIHEAKCLPIIDDGNSHNFLCALRLAVDSQAADQQKLFPQSARTKCVK
PSVSRHSTLNEGSAVWNELFIFEVPRKGPAKLEVEVTNLAAKAGKGED
NT seq
8247 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaagcacacgtcctgcatctgcttagaaggtatttgggggaatatgtcgaagga
ctttcggttgaagctttaagaatcagtgtctggcaaggcgatgttgttctcaaagatctg
aaattaaaggcagaggccctaaactcactaaaacttccggtcactgtaaaagctgggttt
attggtaccattacattaaaggttccatggaaaagtttgggcaaagaacctgtgattgtt
ctcgttgaccgtgtattcatccttgctcatcctgttactgatggcagcactctcaaggag
gacagggacaaactatttgaagctaaacttcaagagattgaggaagccgagtcggcaact
cttgaagcaatatcaaagtcaaagatgggaagtcaatctagtggaaattcatggctaggt
tcccttatcgctaccattattgggaacctgaagatatcaattagcaatgtacatataaga
tatgaggatttggtcagtaatccaggacatcctttttgttcgggtgccactttagccaag
cttgctgctgttacaatggatgaggaagggaaggaaacatttgataccagtggtgccctt
gataagttgcgaaagtcattgcaactagagagacttgcaatgtatcatgactctgatagt
gtaccatggaagatagacaaaaactggggcgatctcgctccaaaggaatgggttgagatt
tttgaagatggtatacgtgaacctgctgatgaccatgtaatggtgtctaagtgggctatg
aatcgcaagtatttggtgtcacctataaatggagttttaaagtatcatcgtgtaggaaac
caagaaagaaatgatccagatgttccatttgagaatgcttctcttgtcttaagtgacgtt
tccttgacaataacagaggctcaatatcgtgattggataaaactattcgaagttgtttca
agatacaagagatatgttgaattttctcatctaaggccagctctagcagtatcagcgggt
ccatctatgtggtggcattatgctgctcaagcaggacttcagcagaagaaaatgtgctac
cggttttcttgggaccgcattcgggttctttgccagctccgtcgccgttacattcagtta
tatgctggtttcttacaacacccaacaaatgttgataatgctgaaattagagaaatcgag
aaagatttggattctaaagtaattcttctgtggaggttacttgctcatgcaaaggtggaa
tctgtaaaatcgaaggaagcggctgaacagaggatgctccagaaaaaaagttggttttcg
tttaaatggcgtacacctgatgaatctgctgaagatatatctgatggatcacagtcccca
gaagaaagactgactaaagaggagtggcaagcaattaataagttactgagttaccagcct
gatgaaacattggcatctcaattggatatgcagaacatgatccggtttatggtaactgtg
tctgttaatcgggctgctgctaggattgttgatataaatcagactgagattctgtgttgt
aaatttgagcaacttcaagtgtcaacgaagtttaaacatcaaagtacatactgtgatgtg
tcattgagattctatggtctgtatgcgcctgaaggctcacttgctcagagcgtgtctagt
aagcggaaggcaaatgctctgactgctagctttgtatactctccagttggagagaatgtt
gactggaggctttcagctaccatttcaccgtgtcatgtcacggtcttgatggaaagctgt
gatcgctttttagattttgtgaagaggagtaatgctgttagtcctactgttacattggaa
acagcaacagctttgcagatgcaaattgagaaagtgactcgtagagcacaagagcaattt
caaatggtgttagaagaacaaagcagatttgcccttgatattgatttagatgctccaaaa
gtaagagttcctatcagaaccaacgggtcttccaaatgtgatagccattttctgttggat
cttggccattttacgctgcagacaaaagatactcagcatgatgaacagaagaagaacctg
tattctcgcttttttattactggaagagatattgctgccttttttactgattgtggtgtc
gatcgtcaaatttgcactttggaatcacctgattctgataaccacccaccggttagcccc
gaaaatgctgacaatttctatcctctcatagataggtgtggaatggctctacttgttgat
cagatcaaagtacctcacccaagttacccgtcaatgtgtgtatcaattcaagtgccaaac
ctaggggtgcacttttccccattgagatttcagagactgatgaaattatcaaacatattg
tatggtaatttggaaaatattggtcagccagctgtcgatgattttcaagcagaaaacgcc
ccttggaatcctgcagatctttacacagatgctagaattttagtgtggaagggaattggc
aattctgtggctacatggcaaccttgttttcttgtgttgtcggggaccaatatttttgtt
ttggagtctgagaagtctcagagttatcagcggtactccagcatggctggtagacaagta
tgtgaggttcctcgaacaagtattggtggttcaccattttgtcttgctgtcattcacagg
gggatggatactcaaaaggctctggagtcttctagtagcttgattattgagttccgtggg
gaggaggagaaggtcgtttggttgaagggacttgtacaagcaacatatcaagcttctgct
cccccttcagttgatatcttggggaaaacaagtgatcatgctgctgagtttggtgagcct
cagaccagcaaatctaaaacagctgacctcgtcattaatggggcacttgtggagacaaag
atatctatttatggaaagatgggtgacaaaaatgctgaagaatttgatgagactctgatg
cttgaggttcttgccagtggggggcaggttcatatgattcgttgggaaggtgacatgaca
cttaatacaaagcttcactctttaaaaattaaagatgagcttcaaggtcgtctgtctaca
accccacagtatttggcttgttctgtgctgaagagtgacaatctagtttcgtcccctggc
atagttgatccacattggaaagaaatgtctgttttacttcatgaggaggatgatacttat
acagatgctttgccagattttatgtctgtatcagatgtaggctttggttcaccagtttca
gatacggtttcacgtgtatcaattgaggatatccatgatgctgctggatctgtgtctgca
tctgcatctgctgaaggcttagttcttgaaaagaatcttttaaaggcaaaatgcatttct
gctgaggaattttacgaggcggagggtagtgactattccaattttgtatctgtcaccttc
tcaactctgagttctagttcacctgattatgatggtactgacacacagatgagcctctgt
atgtcaaaactggaatttttctgcaacagacctactttggttgctttaattgattttggc
ctggacttgagctctgtgtacagtgcggaaagtactgacattactgaaggctcagacgat
aagtctttgacgaacaaagaaaagaccgaagaaattggacgtgtcaaagggttgctgggt
tatggaaaaggtcgtgtagtattttatctgaacatgaatgtggacagtgtaactgtgttt
ctgaacaaggaggatgcttctctgcttgcgacgtttgtacaagaaagttttgtgcttgat
ctcaaggtccacccgagttctctttccatcgaaggcaccctaggaaattttagacttcgt
gatatgtctcttggagaagataactgttgggcctggctatgtgatattcgcaatccagat
gtggaatcccttatcaagttcaactttaagtcttacagtgctgaagacgatgactatgaa
ggatatgattatagtttgtgtggtcgttttgctgctgttcgtatcgtcttcctttatagg
tttattcaggagataactgcatactttatggaacttgctacgcctcatactgaagaagca
attaagcttgttgataaagttggtggttttgagtggctaattgagaagtatgaaattgat
ggagctactgcacttaagctggatctatcgcttgatactccaataattattgttcccaag
aattcaacaagcaatgatttcattcagcttgatctgggccagctacaggtcacaaatgaa
tttagctggcatggttctccagagaaagatccttctgcagtccacattgatgtacttcat
gctgagattctgggtatcaacatgtctgtaggaattgagggtcacatgggtagatcaatg
atacgagaaggcaaaggatttgatgtttatgtccggagaagtttgagggatgttttcaaa
aaagtcccgaccttttctcttgaagtgaaggttggcttattgcatgctgtcatgtctgac
aaagaatataaagttattctggattgcgcatacacaaatttatgtgaagaaccaaagctt
ccccctagtttccgtgggggaaaatctgattcaaaggataaaattaggctgctggttgat
aaggtcaacatgaatagtcaaatcctactatcacggactgttactatagtggcagttgtg
gttgatcatgcactgttggaactctacaattgtatacatgcggagtctccttttgctcaa
attgctcttgaaggtctttgggtgtcttatcggatgacctcattgtctgaaacagatctt
tacataacaatctcaaaattttctgttgttgacattcgtcctgatacaaaacctgaaatg
cgccttatgctgggatcatccactgatgctttcaaacaagtttcttctggaagtctgcct
ttcttcttaaataggggaagctttaggagaactgactctgatgctggattttatggggat
tcaccaatatcaactatgctcttaatggactacagatgccgcacgtcaacccagttgttt
gtaattaggattcagcaacctcgagttctagtcgtagcagatttccttttggctgtgggc
gagttttttgttcctgcactggggacaataactggtagggaggaagtgatggatcacaat
aatgatccaattggtaaatacagtagcatagtattcacagagccgacatacaagcagaca
gaagatgtggtgcatttgtctccaactagacagttagtagcagatcttttaagcattgat
gaatatacatatgatggctgcggaaagaccatccatttgagtgaggaaatggatgctaaa
gaactccagtcaactagacctcgaccaataattattattggacgtggaaaaaggttgcgg
tttatgaatgtcaaagttgagaatgggtcccttttgaggaagtacacgtacttaaataat
gatagcagctactcggtatcttttgaggatggtgtggacatcgagttgctggaaagttcc
tcatgcgatggtgataagaagagtctggaatacttgcatgaatcaccagactcctcaaat
ctttcaaattctgaaagtgatccaaataagatccaaagtttcagttttgaaacacaggtt
gtttctcccgagttcactttttatgatggttcaaagtcgtctctggatgattcctatggt
gaaaagcttctccgtgcaaagctggattttagcttcatgtatgcatctaaagaaaatgac
acctggattcgagctctggtgaaggatctcactgttgaggctgggtctgggcttgttgtg
ctcgatccggtggatatatctgggggatacacttcagttaaggacaaaacaagcatgtcc
ttgttatcaactgatatctgcttccatttatcactaagtgcaatatctcttataagtaat
ttacaaagccaggcaacagctgcattgcaatatggaaattcaacacccctggctccttgt
accaacttcgatcgcatttgggtatccccgaaagaaaatgggtcgtgtttcggtcttaca
ttttggaggcctcgagcaccttcaaattatgttattttgggagattgtgtgacatcaaag
ccaattcctccctcacaggcagtgatggcagtgagtaatacatatgggcgtgtgtgtaaa
ccaaccggtttcaatctcataggattgttttctgcaattcaaggatttttggagggtgat
tctgctattactacagattgttctctttggatgcctatagcaccaccaggatacactgca
atgggttctgtggcaaatattgggaaggaacccccacctacccatattgtttattgcatt
cgttcagatcttgtaacatcaacaacctttatagaatgcttattctgctctccatcaaat
ccacaatttgcgtctggatttagtatctggcgtgtagagaatgcgcttggatcattttat
gcccattcttctactgaatgcccttccaaagacaattgttgtaaccttaatcatcttctt
ctttggaacacaagtcggcatcaatcttctgctaaagaaagatcctcagatctagctgtt
gttgaaaaccgggaaagtcaggaaagtaaaaaccagagcgcacatacttctggatgggat
gttgtcagatcaatttcaaaggcaactaaatgttatatttctacccctaactttgagaga
atctggtgggacaagggtagtgacattcgccgaccagtctcaatatggagaccgattcct
cgtcgaggctatgccatcttgggtgattccattattgaaggcttagaaccaccagctgtt
ggcataatatttaaagctgatgatcctgaaatatctgcaaaacctgtgcaatttactaaa
gttgcccatgtggtagggaaaggttttgatgaagctttcttctggtacccaattgctcca
ccaggttatgcttctataggatgcatagtttccagaatagatgaaccaccacctataaat
tcattttgttgccctaggatggatcttgttagccaagctaatattcttgaggtgcccatt
tcaagatcttcagcttcaaagggttcacagtgctggagcatctggagagttgaaaatcag
gcctgcacttttcttgcacgtggcgatctgaaaaaaccgtctagcagattggcgtatgct
attggtgactccatgaagcccaagactagggagaacataactgctgaggtgaagctaaga
tgcttgtccgtaacggtactagacagcttgtgtggaatgatgactccactatttgacatg
acaatcaccaatatcaaacttgcaacacatggtcgaatggaagctatgaatgcagtgcta
atttcctctattgctgcatcaaccttcaacactcagttagaagcatgggagccacttgtg
gaacctttcgatggaatattcaagcttgaaacatatgatactaatctacactcgccatcg
gaatttgggaagacagtgcgtattgctgccacaagtattgttaatttaaatgtcagcgct
gcaaatcttgaaacttgtatagggaccattctgtcatggagaagacaattagaccttgaa
cggaaagcaaagaagataactgaggaagcttgtggtctaaatgaacaagaagagaaccag
actttgtctgccttggatgatgatgactttcagactgtgatggtagagaataaacttggt
tgcgatatctatctgaaaaaagttgaacaaaattcagatatggtgaaccagttacatcat
ggtgattgtgtctccgtatgggttccacctccacggttttcagacaggttaaacgttgca
gatgaatccaaggaagctcgattatatgttgctatacaaattcatgaagctaagtgttta
cccattatagatgatggcaatagccataacttcttatgtgctttgagacttgctgttgat
agccaggcagcagatcagcaaaaactttttcctcaaagtgcaaggacaaaatgtgttaag
ccttcagtgtcaagacatagtaccctgaatgaaggctctgctgtgtggaatgaacttttc
atatttgaagttcctcggaagggcccagctaaactggaagtggaggtgacaaaccttgca
gcaaaagcgggaaaaggtgaggattag
DBGET
integrated database retrieval system
