Argentina anserina (silverweed cinquefoil): 126792725
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Entry
126792725 CDS
T10558
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7 isoform X1
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans03040
Spliceosome
Brite
Enzymes [BR:
aans01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
126792725
Spliceosome [BR:
aans03041
]
Complex C
Other components
Step II factors
126792725
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GFIT
Other DBs
NCBI-GeneID:
126792725
NCBI-ProteinID:
XP_050375145
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Position
4:complement(20506553..20520113)
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AA seq
1306 aa
AA seq
DB search
MENRGNSEAIKLDKTTVTLEPETSSGGGLFVPGKDRVVYRPPERKSLLGLDVLAIAKREE
SKAEGGFKAPKDRGASVVASLEEEENNSESGVIDDSGDDISTGIRSHSKKRYRGISASDT
PRTESTVTEDGQDNRYKSRNSGERYRTDVLATPSGSSHSARSQSSYNRDDRGSERRDYRG
RSDRDDHDSERRDYQNSSRGDSWRERKRYGSDSQDYHGRREEHGRYEQEYGGEYERKRGR
YEISKRTPGRSDWDDGRWEWEETPRRDGYSNNSRRHQPSRSPMLLGASPDARLVSPWLGG
NTPRSGSAASPWDHISPSPVPIRASGYSSRSSSLKPGARSHQLTFSSENSQSLQGGEGDD
SDLVGEQTYEISESMHAEMEYHSDRAWYDREEGNTMYDTSDSSSLFFGDDASFQKKEAEL
AKRLVRRDGTKMSLAQSKKMSQMTADNAQWEDRQLLRSGAVRGTEVQTEFDDEDERKVIL
LVHDTKPPFLDGRVVYTKQAEPIMPIKDPTSDMAIISRKGSTLVREIHEKQSSNKSRQHF
WELAGSKLGDILGVEKTEEQVDADTAKVGDDGEIDFKEDAKFAQHMKKGEAVSEFAMSKT
LSQQRQYLPIYSVRDELLQVIRENQVIVVVGETGSGKTTQLTQYLHEDGYTVGGIVGCTQ
PRRVAAMSVAKRVSEEMETELGDKVGYAIRFEDVTGPKTIIKYMTDGVLLRETLRDSDLD
KYRIVVMDEAHERSLNTDVLFGILKKVVAQRRDFKLIVTSATLNAQKFSNFFGSVPIFHI
PGRTFPVNILYSKTPCEDYVEGAVKQAMTIHITSPPGDILIFMTGQDEIEAACYSLAERM
EQLISSSNKAVPKLLILPIYSQLPADLQAKIFQKAEDGARKCIVATNIAETSLTVDGIFY
VIDTGYGKMKVYNPRMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLYTENAYLNEML
PSPVPEIQRTNLGNVVLLLKSLKVENLLDFDFMDPPPQDNILNSMYQLWVLGALNNVGGL
TDLGWKMVEFPLDPPLAKMLLMGAELGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAARE
KFSIPESDHLTLYNVYQQWKQHQYRGDWCGDHYLHVKGLRKAREVRSQLLEILKTLKIPL
TTCWPDTDVVRKAICSAYFHNSARLKGVGEYVNSRTGMPCHLHPSSALYGMGCTPDYVVY
HELILTTKEYMQCATAVEPQWLAELGPMFFSVKDSDTSLLEHKKRQKEEKTAMEQEMENL
RKAQAEAEIENKQKEREKRSKQQQQISMPGLNKRSSTYLRPKKLGL
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atggagaatagaggaaacagtgaagctattaagctggacaagacgaccgtgacattggaa
cccgagacgagtagtggtgggggtttatttgttcctgggaaggatcgagttgtgtataga
cctccggagcgaaaatcactcttaggcttagatgtccttgctattgccaaacgggaagag
tctaaggctgagggtggattcaaagccccaaaagataggggtgcttctgttgtagcgtct
ttagaggaggaggaaaataattccgagtctggtgtaatagatgattcaggggatgatata
tccaccggcatacgcagtcactctaagaagcgatatcgtggaatatctgcaagtgataca
cctcgaacagaaagtacggtaacagaagatggacaagacaataggtacaagtctcgtaat
tctggtgaacgttatcggacagatgttttggccacgcctagcggaagttctcacagtgct
aggtctcagagttcatacaacagggatgatcgtggtagtgagagacgagattacaggggt
aggtctgacagggatgaccatgatagtgaaagaagagattaccagaatagtagtaggggc
gatagttggagggagagaaaaagatatggcagtgatagtcaggattatcatggccgaaga
gaagaacatggccggtatgaacaagaatatggtggagaatatgaaagaaaaaggggtaga
tacgaaatttcaaagaggacacctggtcggtctgactgggatgatggcagatgggaatgg
gaagagacaccgcgacgtgatggttactctaataatagtaggcgtcatcaaccatcaaga
tcccctatgctacttggggcctctcctgatgcacgactcgtatctccttggctgggtggg
aatacaccgcgttctggttctgctgcttccccgtgggatcacatatctccatctccagtt
ccaatacgtgcatctggatactcatccagatcttcaagtttgaaacctggtgcaaggtcc
catcagctcacattttcttctgaaaattcacaatcattgcagggtggagaaggagatgat
tctgatttggttggagagcaaacttatgaaattagtgaaagcatgcatgcagagatggaa
taccattctgatcgggcatggtatgatagagaagaaggaaatacaatgtatgatacgagt
gatagctcatcattgtttttcggagatgatgcgtcttttcaaaagaaggaagcggagttg
gcaaaaagactggttcgaagagatggaacaaaaatgagccttgctcagagcaaaaagatg
tctcagatgacagctgataacgcacagtgggaggatcgccaacttttgagatcgggtgct
gttagaggtactgaggtgcagactgaatttgatgatgaagacgaacgcaaagttattctt
cttgtacatgatacaaaacctcctttcctcgatggccgagttgtttataccaagcaagca
gagcctataatgccaataaaggatccgacatctgatatggccataatttcacggaaaggg
tctactttggttagagaaattcatgagaagcaaagttctaacaaatcacgccagcatttt
tgggagcttgctggttccaaacttggggatatccttggtgttgagaaaacagaggagcag
gttgatgcagatactgctaaagtaggtgatgatggggagattgatttcaaagaagatgcc
aagtttgcgcaacatatgaagaagggagaagctgtcagtgaatttgcaatgtcaaaaacc
ctctcacagcaacggcagtatttgcccatatattcggtgcgggatgagttgttgcaggta
attcgagaaaatcaagttattgttgttgttggagaaactggttctggaaagacaactcaa
ctgacacagtatctgcatgaagatggatacacagtaggtggtatagtaggttgcacccaa
ccaaggcgtgtggctgccatgagtgttgccaaaagagttagtgaggaaatggagactgaa
cttggtgataaagttggctatgctattcgttttgaggatgttactgggccaaaaaccata
ataaagtatatgactgatggagttcttttgcgtgaaactctaagggattctgatcttgac
aagtatcgtatagttgtgatggatgaagcccatgaaaggtctctgaacacagacgtgctg
tttggaattttaaaaaaagtggttgcccaacgacgtgatttcaagctcatagtgacatct
gcaactctaaatgctcagaagttttcaaatttctttggaagtgtaccaatttttcacatt
cctgggagaacatttcctgttaatatactgtacagtaagacaccatgtgaagattatgtc
gaaggtgcagtaaaacaggccatgaccattcatatcaccagccctccaggtgacatcctc
atcttcatgactggtcaagatgagattgaggctgcttgttattcccttgcagagcgaatg
gaacaacttatttcctcctctaataaagctgtgccaaaactgttgatacttcctatttac
tcacagttgcctgctgacctgcaagcgaagatattccaaaaagctgaggatggggcccgc
aaatgtattgtagcgaccaatattgcggagacctctcttactgttgatggaatcttttac
gtcattgacacaggttatggcaaaatgaaagtatacaaccccagaatgggtatggatgct
cttcaagttttccctgttagccgtgctgccgctgaccagcgtgctggacgtgcgggtaga
actggtccaggaacttgttatcggctgtacacagagaatgcatacctgaatgaaatgctc
ccaagtcctgtgccagaaatccaaaggactaaccttggaaatgtggtcttgttgctcaag
tcactcaaggttgaaaaccttctagattttgatttcatggatccacctccccaagataat
attctcaattctatgtatcagttgtgggtcttgggtgctcttaacaacgtagggggatta
acagaccttggctggaaaatggtggagttcccattggaccctccacttgctaaaatgctt
ttgatgggtgcggagctgggatgcctggatgaggttttgacaattgtgtccatgctctca
gtgccatcagtattctttaggcccaaagatcgggcagaggagagtgatgctgcacgagag
aagttctctattcctgaatctgatcacctgacgttgtataacgtttaccagcagtggaaa
caacatcagtatcgaggggactggtgtggggaccattacttgcatgttaaagggttgcga
aaggctagagaggtgagatcccagctgctagagatcttgaagacgctgaaaatcccactg
acgacatgttggcccgacactgatgttgttagaaaagctatctgctctgcatacttccac
aattctgctagattgaagggtgtgggggagtacgtgaattccagaaccgggatgccatgc
catctacatccaagcagtgctctttatggtatgggatgcaccccagactatgtcgtttat
catgaactgatcttgactacgaaggagtacatgcagtgtgccaccgcagtggagccacag
tggttggcggagttgggacccatgttcttctccgtgaaggattcagatacatctctgttg
gagcataagaagagacagaaagaagagaagacagctatggagcaagaaatggagaatctg
agaaaggctcaagcagaggcagagatagaaaacaagcagaaggagagagagaaaagatcc
aagcagcagcagcaaatatcaatgcctggtctgaacaaacgctcttccacatatttgagg
ccgaagaaactcggcttgtaa
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