Argentina anserina (silverweed cinquefoil): 126793372
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Entry
126793372 CDS
T10558
Name
(RefSeq) SWI/SNF complex subunit SWI3A isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
126793372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aans03021
]
126793372
03036 Chromosome and associated proteins [BR:
aans03036
]
126793372
Transcription machinery [BR:
aans03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
126793372
Chromosome and associated proteins [BR:
aans03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
126793372
PBAF complex
126793372
GBAF(ncBAF) complex
126793372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
126793372
NCBI-ProteinID:
XP_050375829
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Position
5:4600106..4602906
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AA seq
559 aa
AA seq
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MEIAPHDPGSKQLRPDEPELDLYTIPSHSSWFLWDEIHETERIALKEFFDGRSISRTPKV
YKEYRDFIINKYREDPARKLTFTEIRKSLVGDVTLLHKVFSFLEKWGLINFGATSGRSDG
FGTLGEARTTVKVEEAVPNAVRVGANPSDSKPVSATPVVMERGDGTASKIALPPLASHLN
VFGDVKTEKLVCGNCEGRSDSGHYTYSKGDFLLCTKCFENGSYGENKLKEDFKYNKPVEK
SGNTGGEWTEAETLRLLESVVKHGDDWDRVAQHVQTKTQVECIAKLIDLPFGEVVLGSGH
RKGKHTGNSDGSKHGQLSSSECQETIKAKSQSNEQTNDSEQNGNTANQGPPLKRQCTASL
SDASSPLITQVSALSTLVGPYITAAAAEAAVTALCEETTCSKEIFNAEDNCVTNGLQSPA
INCETESSRVLQLEDAEMIERPTESASQDAFKKKDDIPPTLQIRAAIATGLGAAAARAKL
LADQEDREIEHLLATIIGTQMKKLHCKLKNVEELELLMEKEYVEIEEEEKSLLGERIDII
QKTLNSGVPRWRDHPSLKP
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggaaattgcaccgcacgacccgggttcaaagcagctccgacccgacgaaccagagctc
gacctctacaccatcccaagccactctagttggtttttgtgggatgagattcatgaaact
gagagaatcgcattgaaggagtttttcgatgggaggtctatatcaagaacaccaaaggtg
tacaaggaatatagggactttattattaacaagtatagagaagaccctgctaggaaactc
acgttcaccgagattcgaaagtcgcttgtgggtgatgttactttgctgcacaaagtcttt
agtttcttggagaaatgggggctgattaattttggcgcaacttcggggcgcagtgatggt
tttggtaccttgggtgaggccaggactacggttaaggttgaggaagcagtcccaaatgcg
gtccgagtgggtgcaaatccaagtgattctaagcctgtttcagccacacctgtggtgatg
gagaggggggatggaactgcgagtaagattgcattgcctccattggcttcacacttgaat
gtattcggtgatgtgaagactgagaagttggtttgtggtaattgtgagggacgctctgat
tctggacactacacgtatagcaagggtgattttctactctgcacaaagtgttttgaaaat
ggaagctatggggagaacaaattgaaagaagatttcaagtataataagccagttgaaaag
agtggtaatactggaggtgagtggactgaagcagaaacattacgtcttttagaatcagtt
gtgaagcatggagatgattgggatcgtgttgctcaacatgttcagaccaagacccaagtt
gagtgtattgctaagcttattgatctgccttttggggaggttgtgttgggttctggtcac
agaaaaggtaagcatactggcaattcagatggctcaaaacatggtcagttatcttcatcc
gagtgtcaagagactatcaaggccaagagtcagagcaatgagcagacaaatgacagtgag
cagaatgggaatactgcaaaccaaggtccccctttgaaaagacaatgcactgcttccctt
tcggatgctagtagccctttgatcacacaggtatctgccttatcaaccttggttggtcca
tatataacagctgctgcagctgaggctgctgttactgcactatgtgaggaaaccacatgt
tcaaaagagatatttaatgctgaagacaattgtgttactaatggcttgcaatctcccgct
ataaattgtgagacagagagttctagggttcttcaacttgaagatgcagagatgatagaa
aggccaactgaatcagcaagccaggatgcatttaagaaaaaagacgatatacctccaact
ttgcaaattagagctgccatcgcaacaggtcttggagcggctgctgctcgtgcaaaacta
ctagctgatcaggaggatagagagattgaacatcttttggcaaccataatagggacacag
atgaagaagctgcactgcaaactgaagaatgttgaagaactggagctgcttatggagaag
gaatatgttgaaatcgaagaagaagaaaagtctctgctaggagagcgaattgatatcata
cagaagacgctcaactccggtgtacctagatggagggatcatccttctctaaaaccctga
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