Argentina anserina (silverweed cinquefoil): 126793580
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Entry
126793580 CDS
T10558
Name
(RefSeq) transcription initiation factor TFIID subunit 2 isoform X1
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126793580
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
aans01002
]
126793580
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aans03021
]
126793580
03036 Chromosome and associated proteins [BR:
aans03036
]
126793580
Peptidases and inhibitors [BR:
aans01002
]
Metallo peptidases
Family M1
126793580
Transcription machinery [BR:
aans03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
126793580
Coactivators
SAGA/TFTC/STAGA complex
126793580
Chromosome and associated proteins [BR:
aans03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
126793580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M1
HEAT_2
Peptidase_M1_N
Motif
Other DBs
NCBI-GeneID:
126793580
NCBI-ProteinID:
XP_050376097
LinkDB
All DBs
Position
5:2674622..2684371
Genome browser
AA seq
1461 aa
AA seq
DB search
MAKPRKPKNEDAKPDNSGPLVRHQKLCLSIDLAHRRIYGYTELKVTVPEIGIVGLHAENL
GIEGVSVDGEPADYEYYPHSNHRDSESERNWSSVTSPSSAADAAGSCYISALERELVPNL
LINCCKAFKGRSEVQEQVVAAENEALQSSEEAKQNLRLIRIDYWVEKAETGIYFRDNVLH
TDNQMRRARCWFPCIDDCSQRCCYDLEFTVAQNLVAVSTGTLLYQVLSKDDPPRKTYVYN
LDVPVSAWWISLVVAPFEILPDHQSGLISHMCLPANLPKLRNTVEFFHGAFSCYKDYLAV
NFPFGSYKQVFIEPEMAVSSLSSGASMSIFSSQVLFDEKIIDQTIDTRVKLAFALARQWF
GVYITPEAPNDEWLLDGLAGFLTDLYIKKYLGNNEARYRRFKANCAVCRADDSGATALSS
TASCKDLFGTQCIGIYSKIRSWKSVAILQMLEKQMGPESFRKILQTIVSRAQDKTRPVRS
LSTKEFRHFANKVGNLERPFLKEFFPRWVELCGCPVLRMGFSYNKRKNMVEVAVLRGCTE
ISDSSDSTVNANSESEKRDNDTGWPGMMSIRVHELDGTFDHPMLPMAGETVQLLEIQCHS
RLVAKRLQKPKKGSKPDGADDNGDATPALDIRSSMESPLLWMRADPEMEYLAEIHFNQPV
QMWINQLEKDKDVVAQAQAIAMLESLPQLPFSVVNALNNFLVDSKAFWRVRIEAAFALAN
TASEDTDWAGLLHLVAFYKSRRFDANIGLPKPNDFHDIPEYLVLEAIPHAVAMVRAADKK
SPREAVEFVLQLLKYNDNSGNSYSDVFWLSSLIQSVGELEFGQQSIVLLSSLLKRIDRLL
QFDRLMPSYNGILSVSCIRSLTHIALKLSGFVLLDRVFELVKPFRDIKAIWQVRVEASRA
LLDLEFHCKGINAALALFMRYLDEEPSFRGQVKLAAHAMRLCKIRGGSDCEDEVQSQTLV
ALLRLLEGQMAFNNIFLRHHVFCILQILAGRPATLYGVPRDHRPLLLGDAEGSHVQKNIF
AAFIPQSKSQELPSDQPHVGVSVPETSGDALRATQSTMDGLSAPAPGALRDELSIATPEA
SMGGLSVLAPEASKGDYGASEPPNDAFNSLGPLEPFSDHMVSAVDPSAGGLSAVETFKDV
MVAVPERSKDILIVPERSKDIMVVPEHSMDSLAVREPSKEADTITNSHRRKFPVVKIRVK
RSTTTTSRAEEGDIQTVERSQGGHASSSVSVDAPQRNFRDVVSLSNFEEVNSCHDRGSRM
TVSIGSAKFASDADDNVGKELQCTADSSKVSVQPRTDKSPPSFMHENQDAEVQKYASLQA
LSVPRNDQNGGSFGTVDVQPHGKEKEKKKDKDKKRKRDKGNREDPQYLERKRLKKEKRQK
EKEMSKLLSESAKVPSPDIPNKEVLGIKSATLQPGEPSRSNNKLVLRTVEATRPEASGAS
GTKTITPKIRIKTKFRTLDKS
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcctcgcaagcccaagaacgaggacgccaagcccgacaattctggccccctc
gtccgccaccagaagctctgcctctccatcgacctcgctcaccgtcgcatttacgggtac
actgagctgaaggtcacggtcccggagatagggattgtagggctacacgccgagaatttg
gggattgagggtgtttctgtcgacggagagccggcggattatgagtactaccctcacagt
aatcacagggattcggagagtgagaggaactggagctccgtgacgtcgccgagctctgct
gctgatgcggctggttcgtgttacatttcggctctggagagggaattggtgccgaattta
ctgattaattgctgcaaggcgttcaagggtcgaagtgaagtgcaggagcaggtggtggcg
gcggagaacgaggcgcttcagtcgtctgaagaagccaagcagaatttgagattgattcgt
attgattattgggtagagaaagccgagaccgggatttacttccgtgataatgtactacac
actgataaccaaatgcgccgtgcaaggtgttggttcccttgtatagatgactgttcacag
agatgctgctatgatctggagtttactgtggcacagaatcttgtggctgttagcactgga
accctactctaccaggtcttgagcaaggatgacccccctcgcaaaacatatgtctataat
ttagatgttccagttagtgcttggtggatatctttggtggttgcaccgtttgaaatcctt
ccggaccaccaatctggtctaatatctcacatgtgcttgccagcaaatttgccaaagctt
cgcaacactgttgaattttttcatggggcatttagctgttataaggattatctggcggta
aactttccatttgggtcatacaaacaagtttttatagagcctgagatggcggtatcctcc
ttgagttcaggggcgtccatgagcatatttagttctcaagttttatttgatgagaagatt
attgatcagactattgacacaagggttaagcttgcatttgcacttgcaagacaatggttt
ggtgtttatatcactcctgaggcaccgaatgatgagtggctgctggatggtctagctggg
tttctgacagatttgtatatcaaaaagtatttagggaataacgaagcccgctatcggaga
ttcaaggcaaattgtgccgtttgtagagcggatgatagtggtgctactgctctaagctcg
actgcgtcttgtaaggatttgtttggcactcagtgcattggaatatacagcaaaattaga
tcatggaaatctgtggctatacttcaaatgttggaaaagcagatggggcccgagtctttc
cgtaaaattttgcaaacaatagtttcgagggctcaagacaagacccgtcctgtgagatct
ctcagtacaaaggagtttaggcattttgctaataaagttggtaatcttgagcgccctttt
ctcaaagaattcttccctcgctgggtagaattgtgtggttgtccagttctgaggatgggc
ttctcctacaacaaacgaaagaatatggttgaagttgcagttttacgtgggtgtacagag
atatcggattcaagtgattcaactgttaatgctaattcagaatctgaaaagcgtgacaat
gatactggatggcctggaatgatgagcatcagagttcatgaacttgatggaacatttgat
catcctatgctgccaatggctggagaaacagtccagctgctggaaatacaatgtcattca
aggcttgtggctaaacgcttacagaagcctaaaaagggctcaaagcctgatggagcagat
gataatggagatgcaactcctgccctagatatacgctccagtatggaatctccgttgctg
tggatgagggcagacccagaaatggaataccttgctgaaattcattttaatcaacctgta
cagatgtggattaatcagttggagaaggacaaagatgttgttgctcaggcacaagcaatt
gcaatgcttgaatccttgccacagcttccattctctgttgttaatgctctgaataacttc
ctcgttgactccaaggcgttctggagagttcgaattgaggcagcctttgcattagctaat
acagcatctgaggatacggattgggctggcctactccatttggtggcattctataaaagt
cgaaggtttgatgcaaatattggacttcccaaaccaaatgactttcatgatattcccgaa
tacttagttcttgaggcaattccacatgctgtagctatggttagagccgctgacaagaaa
agcccaagagaggctgttgagtttgtcctacaattgctgaagtacaatgacaacagtggc
aactcatattctgatgtcttctggctttcttcattaattcagtctgtcggagaacttgaa
tttgggcaacagagtattgtccttttatcatctcttttgaagcgtattgatcggcttttg
caatttgacaggttgatgcctagctataatggtatcttgtcagtcagctgtatcaggtcc
ctgacacatattgctttgaaactttccggatttgtccttcttgatcgtgtatttgaactt
gtaaaaccttttcgcgatatcaaggccatatggcaagttagggttgaagcaagcagagca
ctccttgatcttgaattccactgcaaaggcattaatgcagctttggcgctgtttatgaga
tatttagatgaagagccatcattcagagggcaggtgaagttggctgcgcatgctatgagg
ttatgcaagataagaggtggatccgattgtgaggatgaagttcaaagccagactcttgtt
gctttacttcgcctgcttgaaggccagatggcatttaataatatctttcttcgtcaccat
gtattctgcatcctacaaatccttgcaggaaggcccgcaaccttgtatggagtgccaaga
gatcatagacctttgcttctcggtgatgcagaaggctcacacgtgcagaagaacattttt
gctgctttcattccacaaagtaaatctcaggaactaccttctgaccaaccacatgttggt
gtgtctgttcccgaaacttccggagatgctttgcgtgctacacagtctaccatggatggg
ttgtccgccccagccccaggagctttgagagatgaattgtccattgcaactccggaagcg
tccatgggtgggctatcagttctggctcccgaagcttccaagggagattatggtgcttca
gaacctcccaatgatgctttcaatagtttgggtcctctagaacctttcagtgatcatatg
gttagtgcggtagatccttccgctggtggtttgagtgctgtggaaactttcaaggatgtc
atggtagcagttcctgaacgttccaaggacatcttgatagttcctgaacgttccaaggat
atcatggtagttcctgaacattccatggatagcttggcagttcgtgaaccttccaaggaa
gcagataccattaccaacagccacagacggaagtttcccgttgttaagatcagggtcaaa
agatctactactactactagcagagcagaagaaggtgatattcaaactgttgagagatct
caaggtgggcatgccagcagttctgtgtctgtggatgcacctcaacgaaatttccgtgat
gttgttagccttagcaactttgaggaagtcaactcttgtcatgatcgtggatcccggatg
actgtcagcattggtagtgccaaattcgcaagtgatgctgatgataatgtaggaaaggaa
ttgcagtgcactgctgattcaagcaaagtttctgtacagcctcgaacagataaatcacca
cctagtttcatgcatgagaaccaagatgcagaggtgcagaagtatgcaagccttcaagcc
ctttcagttccaagaaatgatcagaatggtggttcgtttggcacggtcgatgtacagcct
cacggtaaggaaaaggagaaaaagaaagacaaggacaagaaaaggaagcgggataaaggg
aatcgagaagatccccagtatttagagcgaaaacgtttaaagaaggagaaaaggcagaaa
gagaaggagatgtcaaaattgttgagtgagagtgccaaagtaccctccccggacatacca
aataaggaggttcttggaatcaaatctgcaacactgcaaccaggtgagcccagtagatca
aacaacaaattagtcctcagaactgttgaagcgaccaggcccgaggcatctggagcatca
ggaactaaaaccatcacccccaagatacgtattaaaaccaaatttcgaactctggacaaa
tcatag
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integrated database retrieval system
