Argentina anserina (silverweed cinquefoil): 126793733
Help
Entry
126793733 CDS
T10558
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126793733
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aans03041
]
126793733
03009 Ribosome biogenesis [BR:
aans03009
]
126793733
Enzymes [BR:
aans01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126793733
Spliceosome [BR:
aans03041
]
Complex A
U1 snRNP components
U1 related factors
126793733
Complex B
126793733
Ribosome biogenesis [BR:
aans03009
]
Eukaryotic type
Pre-60S particles
Helicases
126793733
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
126793733
NCBI-ProteinID:
XP_050376300
LinkDB
All DBs
Position
5:5747648..5751653
Genome browser
AA seq
602 aa
AA seq
DB search
MYAYDNRYSDSNSYRERRSDLMGPAPASAPPPSYGRGGGVAPYRGPAHPYGGGAAGGDRS
GYPPFQPPAGRFSIGRDGGGRGRGGGGRGFDGGRGGGRSSGYSRGGGSSGFGGGRGGGRH
GGGGSARGDLDGIVLPRQDFGNLVPFEKNFYIESPSVKAMSEHEVVAYRARREITVEGHD
VPKPIQTFRDASFPGYCLDVIAKLGFVEPTPIQAQGWPMALKGRDLVGIAETGSGKTLSY
LLPSLVHISAQPRLAPGDGPVALVLAPTRELAVQIQEEAVKFCSENYIRSTCIYGGAPKG
PQIRDLRRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQ
TRPDRQTLYWSATWPREVESLARQFLRNPYKVIIGSASLKANQSIKQVIEVVTEFEKYNR
LLKLLKDSIIGSRILIFVETKKGCDHVTKQLRMDGWPALSIHGDKNQAERDWVLAEFKSG
RSPIMTATDVAARGLDVKDIKCVINYDFPSSLEDYVHRIGRTGRAGATGTALTFFTESNG
KFARELIKILQEAGQVVNPALSAMARSSGSNYGGGNFRSRGRGGFGNRSGSNNVPVGYKR
PW
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcctacgacaaccgttactccgactccaactcctaccgcgaacgccgaagtgac
ctaatgggtccggcgcctgcgtcagcaccgccaccgagctacggccgtggcggtggggtg
gcaccgtacaggggcccagcgcatccgtacggtggaggcgcggctggcggagataggagt
gggtaccctcctttccagccaccggcggggcggttcagcatcggccgtgacggaggtggg
agaggccgtggcggcgggggtaggggttttgatggaggacgtgggggtggtaggagctca
ggttatagtcggggaggagggagttcgggtttcgggggtggaagaggaggtggtagacat
ggtggtggtgggtcggcgagaggtgacttggatggcattgttcttcctaggcaggatttt
gggaacttggttccttttgagaagaatttttatattgagagcccgtcggtgaaggctatg
tcagagcatgaagttgtggcgtatcgagccaggagggagattacggttgaagggcatgat
gtccccaagccgatccagacttttcgggacgcaagtttccccggttattgccttgatgtg
attgccaagttgggtttcgttgaaccaacaccaattcaggctcaaggatggcctatggca
ctgaagggtagagatttagttggaattgccgagactggttccggaaaaaccctttcatat
ctgcttccatctctggtgcatatcagtgctcagcctcgattagctccaggtgacggtcct
gttgcgttagtgttagcacctactcgggaattggcagttcaaattcaagaagaagctgta
aaattctgttcagaaaattatattaggagtacatgcatttatggtggtgctccaaaagga
ccccaaatacgcgatctcagaagaggggttgagattgtgatagctacacctggcagactt
atagatatgttggaagcccaacacacaaatttgcgaagagtgacttacctagttttggat
gaggctgataggatgttggacatgggatttgagccgcagataaggaaaattgtatcccaa
acccgaccagatcggcagacattgtattggagtgccacatggccaagggaggttgaatct
ttagcaaggcagtttttacgaaatccctataaggtaatcattggatcggcaagtttgaaa
gcaaaccaatccataaagcaagttattgaagttgtgaccgagtttgagaaatataatagg
ctgctcaaattgctaaaagactctataattgggagccggattctgatatttgtggagaca
aaaaagggttgtgaccatgttactaagcaattgagaatggatggatggccagctctgtca
attcatggtgataaaaaccaggctgaaagagactgggtcttggctgagtttaaaagtggc
agatcacccataatgactgccacagatgtggctgcacggggtcttgatgtgaaggacata
aaatgcgtgatcaattatgattttccatctagccttgaggactatgtccacaggattgga
cgaacaggacgtgcaggggcaacaggaactgctttgacttttttcacagagtcaaatggt
aaatttgctagagaactgatcaaaatcctgcaggaagcaggtcaggttgtgaatccagca
ttgtctgcgatggcacgatcatctggttccaactatggaggggggaatttccgctctaga
gggcgaggaggctttggtaatcggtctgggtcaaacaatgttcctgttggttataagaga
ccttggtag
DBGET
integrated database retrieval system
