Argentina anserina (silverweed cinquefoil): 126793824
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Entry
126793824 CDS
T10558
Name
(RefSeq) LOW QUALITY PROTEIN: DNA mismatch repair protein MSH2
KO
K08735
DNA mismatch repair protein MSH2
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
126793824
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aans03400
]
126793824
DNA repair and recombination proteins [BR:
aans03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
126793824
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
Motif
Other DBs
NCBI-GeneID:
126793824
NCBI-ProteinID:
XP_050376409
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All DBs
Position
5:2715227..2722085
Genome browser
AA seq
941 aa
AA seq
DB search
MDPNFEDQSKLPELKLDAKQSQGFLSFFKTLSRDPRAIRLFDRRDYYTAHGENATFIAKT
YYRTTTAMRQLGSGSDGLSSVSVSKNMFETIARDLLLERTDHTLEIYEGSGSNWRLAKSG
TPGNLGSFEDVLFANNEMQDTPVVVALLPNFRENGCTVGLGYVDLTKRALGLVEFLDDSH
FTNLESALVALGCKECLLPIESGKTGEIRALHDALTRCGVMSTERKRSEFKMRDLVQDLS
RLVKGSIEPVRDLVSGFEFAPGALGALLSYADLLADESNYGNYNIQRYNLDNYMRLDSAA
MRALNILESKTDANKNFSLFGLLNRTCTAGMGKRLLHMWLKQPLLNVDEINSRLNLVQAF
VEDPSLRQDLRQHLKRISDIERLVHNLEKKRAGLQHVVKLYQSCIRLPYIKSSLERYDGE
FSSLIKEKYLDDLELWTDDGHLNKFLALVEAAVDLDQLENGEYMIASSYDPALSALKNEQ
ELLAQQIHNLHKQTAKDLDLSVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLE
TRKDGVKFTNTKLKKLGDQYQRILEEYKNCQKELVNRVVHTVSTFSEVFCSVAGVLSELD
XLSFADLASSCPTPYTRPHITSSDVGDIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSWF
QIITGPNMGGKSTFIRQVGVIILMAQVGSFVPCEKASISIRDCIFARVGAGDCQLRGVST
FMQEMLETASILKGSTDKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVINAPTLFATHF
HELTALAQENAIHEPNMKQVTGVANYHVSAHIDSSSRKLTMLYKVEPGACDQSFGIQVAE
FANFPETVVSLAREKAAELEDFSPTAIIPNDDRQEVGSKRKREYDSDDMSRGAALAPKFL
KEFSEMPLDTMDVQQTLQIVSKMKDGLQTEAVNSQWLQQFF
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggatcccaatttcgaggaccagagcaagcttcccgagcttaaattagatgcgaagcaa
tctcaagggtttttgtcattcttcaaaaccctctcccgtgacccaagagctattcgcttg
tttgatcgtcgggactactatactgcccatggtgaaaatgctactttcattgcaaagacc
tattatcggaccaccactgccatgcgacaattgggtagtggatctgatggtctttcgagt
gtgagtgttagtaagaacatgtttgaaacaattgcccgtgatcttctactggaaagaaca
gatcatactcttgagatctatgagggcagtggctcaaattggagacttgcgaaaagtgga
acgcctggaaatcttggaagttttgaagatgttttatttgcaaacaatgaaatgcaggat
actccagtggttgttgcactattacccaactttcgtgaaaatggttgcacagtggggcta
ggatacgttgatctaactaaacgagcacttggattagttgaatttctcgatgatagccac
tttacaaatttggaatcagctttagttgcacttggttgcaaggaatgccttctgcctata
gagagcggaaaaactggtgaaatcagagcgctacatgatgcattgactcgatgtggtgtg
atgtcgactgagaggaaaaggagtgaatttaagatgagggatttggttcaggatctcagt
cggcttgttaagggatctattgaaccagttcgagatttagtttctggatttgagtttgca
cctggtgcattgggggcattgctctcttatgcagacctactcgcggacgagagtaattat
gggaactataacatccaaagatataatcttgacaactatatgaggctggattcagctgcg
atgagggcacttaacatcctggaaagcaaaactgacgcaaacaaaaatttcagtttgttt
ggtcttttgaatagaacctgtactgctggaatgggtaaacgattactacacatgtggcta
aaacagcctttattaaatgtagatgaaatcaattccaggttaaatttggtacaagcattc
gtggaggatccatcactacgccaagatttgaggcagcatttgaaacgaatctcagacatt
gaacgcctagtgcacaatctggaaaagaaaagagccggtttacagcatgttgtaaaactt
tatcagtcatgtataaggcttccatacatcaaaagttccctagaacggtacgatggggag
ttttcctcgctgatcaaggaaaaatatctggatgatcttgaattatggactgatgatggc
cacttaaataagtttcttgctctagtggaagctgctgttgaccttgatcaactcgagaat
ggagagtacatgatagcatctagttatgatcctgctctttctgcactgaagaatgagcaa
gagttgctggctcagcagatacacaatctgcataagcaaactgctaaggatcttgatctc
tctgtagataaggccttaaagttagataaaggcacacaattcggacatgtctttagaatc
acaaaaaaggaagagccaaaaatacggaaaaagcttacaacacaattcattgtcctggaa
acccgaaaagatggagtaaagtttactaataccaagctaaaaaagttaggggatcaatat
cagagaatccttgaggaatacaaaaattgccagaaagaactggtcaaccgagttgttcac
actgtatccactttctcagaggtgttctgttctgtagcgggtgtgttgtctgaattggac
ngtcttagttttgctgatttggcttctagttgtcctactccttacacgaggccacatatc
acttcatcagatgtgggggatattatactagaagggagtagacatccttgtgtggaggct
caggactgggttaatttcatacccaatgattgtaaactcgtaagaggaaagagttggttc
caaatcattacagggcctaatatgggtggaaaatccacgtttatccggcaggttggtgtg
attattctaatggcacaagttggttcttttgttccttgtgagaaggctagcatttctata
cgtgattgcatttttgctcgagtgggtgctggtgattgccaactacgtggagtttctacc
ttcatgcaagaaatgctcgagactgcatctatactgaaaggatctacagataagtcactg
attatcatcgacgagttaggccgagggacatcaacttatgatggatttggtttggcttgg
gcgatttgcgagcatcttgttgaagtgataaatgcacctactttgtttgcaacccacttt
catgaattgaccgcgttagctcaagaaaatgccattcatgagcctaatatgaagcaagtt
actggtgttgctaactatcatgttagtgcacatattgactcatcaagccgcaagttgact
atgctgtacaaggttgagccaggggcttgtgatcaaagttttggtatccaggttgcagag
tttgctaactttcctgaaactgttgtatcccttgctagagaaaaggctgctgaattggag
gatttctctcccactgccatcattccaaatgatgacagacaagaggttggatccaagcgc
aagagagaatatgattctgatgacatgtccagaggagctgctcttgcgcccaagtttctg
aaagagttctctgaaatgccattagatacaatggatgtacagcagactttgcaaatagtt
agcaagatgaaggatggcttgcaaacggaggcagtgaacagccaatggctacagcagttt
ttctag
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