Argentina anserina (silverweed cinquefoil): 126793829
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Entry
126793829 CDS
T10558
Name
(RefSeq) cell division control protein 48 homolog E-like
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
126793829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aans03019
]
126793829
03009 Ribosome biogenesis [BR:
aans03009
]
126793829
04131 Membrane trafficking [BR:
aans04131
]
126793829
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aans04147
]
126793829
Messenger RNA biogenesis [BR:
aans03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
126793829
Ribosome biogenesis [BR:
aans03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
126793829
Membrane trafficking [BR:
aans04131
]
SNARE
SNARE associated proteins
Others
126793829
Autophagy
Aggrephagy
Other aggrephagy associated proteins
126793829
Exosome [BR:
aans04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
126793829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
AAA_33
AAA_5
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
AAA_17
nSTAND3
Mg_chelatase
AAA_28
ATPase_2
AAA_18
Parvo_NS1
IstB_IS21
ABC_tran
AAA_7
Vps4_C
NACHT
Viral_helicase1
NB-ARC
TsaE
Zeta_toxin
ResIII
AAA_24
DUF815
AAA_lid_PRS2_C
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
126793829
NCBI-ProteinID:
XP_050376415
LinkDB
All DBs
Position
5:complement(5898767..5904094)
Genome browser
AA seq
812 aa
AA seq
DB search
MADSSSSNPAQSSSDPKAKKDYSTAILERKKSPNRLVVDEAINDDNSVVSLHPATMEKLQ
FFRGDTVLIKGKKRKDTVCIVLADELCEEPKIRMNKVVRANLRVRLGDVVSVHTCPDVKY
GKRVHILPIDDTIEGVTGSLFDAYLKPYFLESYRPVRKGDLFLVRGGMRSVEFKVIETDP
SEYCVVAPDTEIFCEGEPVRREDEERLNEVGYDDVGGVRKQMAQIRELVELPLRHPQLFK
SIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFE
EAEKNAPSIIFIDELDSIAPKREKTQGEVERRIVSQLLTLMDGLKSRTHVIVMGATNRPN
SIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLERVSKDAHGYVGADL
AALCTEAALQCIREKMDVIDLEDEEIDAEVLNSMAVTDDHFQTALGASNPSALRETMVEV
PNVSWDAIGGLDNVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAI
ANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVG
DAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEA
SRLQIFKACLRKSPVSKDVDLAVLACHTHGFSGADITEICQRACKYAIRENIEKDIEKER
RKAENPEAMEEDDIDEVPEIKAAHFEDSMKFARRSVSDADIRKYQAFAQTLQQSRGIGTD
FRFPQTGNAAGGAASDPFASAPAAADDDDLYS
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atggcggattcgagctcatccaatccggcccagtcttcttccgacccgaaagctaagaag
gattattcaactgcgattttggagcggaagaagtctcctaatcgactcgtggttgatgaa
gctatcaatgatgataattctgtggtgtccttgcaccctgctacaatggaaaaactgcag
tttttccgaggtgacactgtgctaataaaggggaagaaacgaaaagatacagtttgcatt
gttcttgctgatgaactatgtgaagaaccgaaaatcagaatgaacaaagttgtaagggct
aatctcagggtacgtcttggagatgttgtgtctgttcatacttgtcctgatgtcaagtat
gggaagcgagttcacatccttccaatcgatgatacaattgaaggcgtaactggaagcttg
tttgatgcatatttgaagccatactttttggagtcttaccggcctgtgaggaagggtgac
cttttcctggtcaggggtgggatgcgtagtgttgagttcaaggtcattgagacagaccct
agtgaatattgtgttgttgctcctgatacagagattttctgtgagggagaacctgtgaga
cgtgaggatgaggaaagattgaatgaggtgggctatgatgatgttggcggtgttaggaag
caaatggctcagatacgtgagttggtagagttacctcttagacacccgcagctattcaag
tccattggagtgaaaccacctaaaggtatactgctttatggaccacctgggtctgggaaa
actctgattgcgagggctgtagctaatgagactggagcattcttctttttgattaatggg
cctgaaataatgtcaaagttagctggtgagagtgaaagcaacttgaggaaagcatttgaa
gaagctgaaaagaatgccccatcaatcatttttattgatgagttagattccattgctcca
aagagggagaagactcagggtgaagtggaaaggcgtatagtttcgcaacttctgactttg
atggatggcctcaagtcccgtacccatgttattgtcatgggagctacaaataggccaaac
agcattgaccctgctctgaggaggtttggaagatttgatagagagatcgatattggtgta
ccagatgaagttggcagactggaagttttgagaatccatacaaagaacatgaaacttgca
gaagatgttgatcttgaacgagtttcaaaggatgcacatggttatgttggtgctgatctt
gccgcgctctgtactgaggctgctcttcagtgcatccgtgagaaaatggatgttattgac
ttggaagatgaggaaattgatgctgaggtgttaaattccatggctgtgacagatgaccac
ttccagaccgcattgggtgcttcaaatccttcagcattgcgtgaaactatggtggaggta
cctaatgtctcatgggacgctattggtggattggacaatgtcaaaagagaacttcaagag
actgttcaatacccagtggagcatcctgagaagttcgagaaatttggcatgtcaccatct
aaaggtgtactcttttatggcccacctggctgtggtaaaacccttcttgccaaggctatt
gccaatgaatgccaggctaattttattagcatcaaaggcccagagttgctaacaatgtgg
tttggagaaagtgaggctaacgtccgtgagatatttgacaaggctcgccaatctgctcct
tgtgttcttttctttgatgagctggactcaattgcaactcagcgtgggagttctgtagga
gatgctggtggtgctgcagatagagtcttgaaccaacttcttactgaaatggatggaatg
tctgcgaagaaaacagtttttatcattggagcaacaaacaggccagacattatcgaccca
gcattgcttaggcctggtcgtcttgaccagctcatttatatcccactcccagatgaggct
tcccgtcttcagatattcaaagcatgtttgcggaagtcaccagtctctaaggatgttgac
cttgcagtacttgcatgtcatacccacggttttagtggtgctgatattactgagatatgt
cagcgtgcctgcaaatatgccatcagagaaaatatcgagaaggatattgagaaggagaga
agaaaagcagagaacccagaagcgatggaggaggatgacattgatgaggttcccgagata
aaggcagcacacttcgaggattctatgaaatttgcccgcagaagtgtcagcgatgcagac
atcaggaagtaccaggcattcgctcagactctgcagcaatctcgtgggataggaactgac
ttccggttcccccaaactggcaacgctgcaggaggagcagcttcagacccctttgcttca
gccccagctgctgcagatgacgatgatctgtacagctga
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