KEGG   Argentina anserina (silverweed cinquefoil): 126793869
Entry
126793869         CDS       T10558                                 
Name
(RefSeq) LOW QUALITY PROTEIN: putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
aans  Argentina anserina (silverweed cinquefoil)
Brite
KEGG Orthology (KO) [BR:aans00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:aans04121]
    126793869
   03400 DNA repair and recombination proteins [BR:aans03400]
    126793869
Enzymes [BR:aans01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     126793869
Ubiquitin system [BR:aans04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    126793869
DNA repair and recombination proteins [BR:aans03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    126793869
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4_3 zf-C3HC4 zf-RING_2 zf-C3HC4_2 DEAD zf-RING_5 zf-rbx1 CAA_C Prok-RING_4 ResIII zf-ANAPC11 RING_XB3-XBAT31 Rad50_zn_hook zf-RING_UBOX DEAD_2 HDA2-3 AAA_34 DZR_2 zf-RING_4 DUF1644
Other DBs
NCBI-GeneID: 126793869
NCBI-ProteinID: XP_050376454
LinkDB
Position
5:complement(20244522..20249456)
AA seq 876 aa
MDDQEGEDPVSRHLTNLDQWQCPIAEPSDAFVPTTPPEDTYMLGFLIANIVGIQYYSGSI
TGREMVGLVREPLNPYDPNAIRVLNTRSLQVGHIERKVAAALAPSIDADLIAVEGIVPKT
RSKANRFKVPCQVHIFARIHDFPAVRSAVIGAGMQLISNEDAGFALSEAAAVKEKKAESG
YKTVDEIFKLVEDNAGLKGALEAVEPPGEVIKSELFWHQKEGLGWLVGRENSADLPPFWE
EKNDGSFVNVLTNYHTDKRPEPLRGGIFADDMGLGKTLTLLSLIALDRYGSGSSASVDER
IPNDSATCEDERLSVFGKRTKTKGGSMVYSSRQVTKKIRKNEDSNASGNDLCSGGLSSKS
TIIVCPPSVFSTWVTXEHTKSGKLKVYMYYGERTRIAEELIKYDIVLTTYSILATEHSWP
SSPVKEIEWWRVILDEAHTIKNVNAQQSQAVANLKAKRRWAVTGTPIQNGSYDLFSLMAF
LRFEPFSIKSYWQSLVQRPLAQGNNMGLSRLQVLMATISLRRTKDKAMIGLPPKTIETCY
VELSAEERDLYDRMEGEVKSVLWNYIDSGSMMRNYSTVLSIILRLRQICTDLALCPSDLK
SLIPSSNVEDVSKNPELLKKMVEVLQDGEDFDCPICISPPTNVIITRCAHMFCQACIVKT
LQHTKPCCPLCRRPLSQSDLFSSPQTSSDDDNTISSERTMSSKVSALLKLLVESRDQNPL
AKSVVFSQFRKMLLHIEDVLKKAGFKVLRLDGTMTANKRAQVIREFAVVGDDAPTILLAS
LKASGTGINLTAASRVYLLEPWWNPAVEEQAMDRIHRIGQKENVKIVRLIARNSIEERIL
ELQEKKKKLAKEAFGKRAAKDWREVGADDLISLMSL
NT seq 2631 nt   +upstreamnt  +downstreamnt
atggacgaccaagaaggagaagacccagtaagccgccacttgacgaacctcgaccaatgg
cagtgccccattgctgagccctccgacgctttcgtccccactactccccccgaggacacc
tacatgctcggcttcctcatcgccaacatcgtcggaatccaatactactccggcagcatc
accggccgcgagatggtcggccttgtccgcgagcctctcaacccttacgatcccaacgcc
atccgcgtcctcaacacccgctccctccaagtcggccacatcgaacgcaaagtcgccgcc
gccctcgcaccctcgatcgacgctgacctcatcgccgtcgagggcatcgtccccaaaacg
cgctccaaggccaaccggttcaaagttccctgccaggtccacatcttcgccagaatccac
gacttccccgccgtgaggtccgccgtgatcggcgccgggatgcagctgatttcgaacgag
gacgcggggtttgcgctctcggaggcggcggcggtgaaggagaagaaggcggagagcggg
tacaagactgtggatgagattttcaagctggtggaggacaatgccggcctgaagggtgcg
ttggaggcggtggagccgccgggagaggtgatcaaatcggagcttttttggcaccagaag
gaagggctggggtggttggttgggagagagaattcggctgatttgcctccattttgggaa
gagaaaaacgatggctcttttgttaatgtgttgacaaattaccatacggataagcggccg
gagcctctaagaggcgggatctttgcagatgatatgggtttgggtaagaccctgactttg
ctttccttgattgctttggatagatatggtagtggcagtagtgctagcgtagatgaaagg
ataccaaatgatagtgcaacgtgtgaggatgagaggttgtctgtttttggtaagaggact
aagactaagggagggagtatggtttattcgtcaagacaagtaacaaagaaaatacgtaaa
aatgaggatagcaatgctagtggaaatgatttgtgtagtggcggtttgagtagcaagtcg
acgataattgtgtgccctccttctgtgttttcaacatgggttactncagaacacactaag
tcgggcaaattgaaggtgtatatgtattatggggagcggactcgaattgctgaggagctg
atcaagtatgatatagtgttaactacttacagtattcttgctactgaacattcttggcca
agctctcctgttaaagagattgagtggtggcgggtcattttggatgaggcgcatacgatt
aagaatgtcaatgctcaacaaagtcaggctgtcgctaatttgaaggctaagagaaggtgg
gctgttactggaactccaatccagaatggctcatacgatttgttttctttgatggcattc
ttgagatttgagcctttctcaattaagagctactggcagagcttggtgcagcgcccgctt
gctcaaggtaacaacatggggctctcacgactgcaggttttgatggcaaccatttctttg
cggagaacaaaagacaaagcaatgattggattacctcctaaaactatagagacttgctat
gtggaactatctgctgaagaacgtgatctgtatgataggatggaaggcgaagtgaagagt
gtattgtggaattacatagattctggtagtatgatgcggaactattccactgtgcttagc
ataatcttacgactgcggcaaatctgtactgatttggccttgtgtccttctgatctcaag
tcacttattccttccagcaatgttgaagatgtatcaaagaacccagagttactgaaaaag
atggttgaggtgctacaagatggtgaagattttgattgtcccatctgcatttctccacca
accaatgtcattattactcgttgcgcacacatgttttgccaagcctgtattgtgaaaacc
cttcagcacaccaaaccctgctgccctttgtgtcgccgtcctctatcacaatctgatctg
ttctcatcgccgcaaacatcttctgatgatgacaacacaatatcttcagaaagaaccatg
tcatcaaaagtatctgctctcttaaaacttcttgttgaatcaagggatcaaaatccactg
gccaaatcagtagtgttttcacaatttcgaaagatgttgctacacatcgaagatgtactg
aaaaaagctggtttcaaagttttgcgtttggatgggactatgactgcaaataaaagagct
caagtaatcagagagtttgcggttgtaggagatgatgcacccacaattttgcttgcaagt
ctgaaggcttcaggaacagggataaatcttactgctgctagtagagtctatctgttggag
ccatggtggaacccagcagttgaggaacaagcaatggatcgtattcaccggatagggcag
aaggagaatgttaagattgtcagattgattgctcgaaatagcatagaagagaggatattg
gagttacaggagaaaaagaagaaacttgcaaaagaagcttttggaaagagagctgcaaag
gattggagagaagtgggtgctgatgatcttattagtctcatgtccttgtga

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