Argentina anserina (silverweed cinquefoil): 126794617
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Entry
126794617 CDS
T10558
Name
(RefSeq) SNF2 domain-containing protein CLASSY 3-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
126794617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aans03400
]
126794617
DNA repair and recombination proteins [BR:
aans03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
126794617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
126794617
NCBI-ProteinID:
XP_050377331
LinkDB
All DBs
Position
5:complement(11631231..11636270)
Genome browser
AA seq
1054 aa
AA seq
DB search
MFDYSLPIATRTRKRQDIAYKEFNENKKKQQKEVGGSAASTGLEKSEFIVLSDSSVEDDS
SGDSDSVESVAEGSEEVGKGRSVKAGGVEGSTRSGLSADSGVKVISLVSDSDDDAVSISK
EGGGAGGDSDRVKDSDMRSVHSDEELHEFSADDGDNEDDIESIPSDDSASEYKNSSDDYA
SNYTHDEGPLNSDREIEDAKRSEAEGEKVGICQKRKRNFGGDGDGQKFNCVAHRTRSWSG
NHSSSHDDQRDTVYENQCGSQRNKHPKMDSQCNNRRSETDPCSLNYERNEWNNVQKASEK
SKGSRKLSKKKYTRGKRDANAYNILADSICEDVEVPPEASASFGDKVVKNVTLPLKFSFG
KPPSIVPEEKSDSEKEQDKLYEEMEFAIRSAQIGSTDCNEVEINDVPPVKEVTQHMLCSR
GEHHLILDEEIGLICKYCLHVHREIKYMVPDFAPNPYGRSGKRSYEEDNWSIPDEVQCHE
SGSGLTSNAHVDGTVWDLIPGVKSSVYPHQREGFEFIWSQIAGGIHLEQLQNTSADGGGG
CIISHAPGTGKTRLTIVFLQAYMKFNPKCRPLIIAPRTMLHTWEEEFKKWGFEIPFHNLN
NQSLSGKENKAALEILVQNIGQRRVKKMESSRWLKLYSWNKERSILGISYRVFEKLYTEH
NPGDKKAGLAEKMRNILLDFPGIVVFDEGHTPRNDKSHMWKASSNIKTHRRIILSGTPFQ
NNFDELYNTIRLARPDWIGHTCSARDKAKQAKKIRAEIAPIVHVYRGSILRDALPGLRNS
IVVLQPNKLQKEISMKIQEKKDLPFFKVEHYETLISVHPSALLNLEKDTRVSFLNHVDLK
KLKEKRSNPESGMKAKFVIELIRLSDAMKERVLVFSQYINALTILKELLKSQFQWNEENE
ILFMSGAEKSKQRQSSMKAFNDPLSRAKVLLASTKGCNEGINLVGASRVVLLDVTWNPSV
ERQAISRAYRLGQKKIVFIYHLLLAGQREEDKHSRQIDKHRLSELVFSSSDKEAAKKIPA
VVAEDTILEEMVNHEKLKHMFEKITLLDEASWFD
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgtttgactatagcttgcctatagctactagaacaaggaagcggcaggacatagcttac
aaggagttcaatgagaacaagaagaagcagcagaaggaagtgggtggctcagcagcgtcc
actggtttggagaaatctgaattcatagttctttcggatagtagcgtggaggacgatagc
tcaggggattctgattcagtagagagtgttgcagagggaagtgaggaggtggggaaaggg
cggagcgtgaaggctgggggtgttgagggaagtacaaggtcggggttgtcagctgattct
ggtgtgaaagtcattagtttggttagtgatagtgatgatgatgcagtgtcaataagtaaa
gagggaggtggagctggaggggactctgacagggttaaggatagtgatatgagaagtgta
cattcagacgaggaacttcatgagttctcagctgatgatggtgataatgaagatgatatt
gaaagtattccttcagatgattctgcgagtgaatataaaaattcatcagatgattatgca
agtaattatacacatgatgagggacctttaaattcagatcgtgaaattgaggatgcaaag
agaagtgaggcagagggggaaaaggttggtatatgtcaaaaaagaaagagaaactttgga
ggggacggcgatggtcaaaagttcaattgtgtagcacaccgtactcgttcatggtcagga
aatcattcctctagccatgatgatcagagggatactgtttatgaaaatcaatgtggtagt
cagagaaacaagcatcctaaaatggattcacagtgcaacaatagaagaagtgagacggat
ccttgtagcctgaactatgaacgtaatgaatggaataatgtgcagaaagcatctgaaaag
agcaaagggtcaaggaagctctctaaaaaaaagtacaccaggggaaaaagagatgctaat
gcgtacaacattcttgcagattcgatttgtgaagatgtagaagtaccgccagaagcatca
gcttcctttggggataaagtcgttaaaaatgtaactcttccattgaagttctcatttggt
aagccgccaagcattgttccagaagagaagtcagattccgagaaagaacaagataagctt
tatgaagaaatggaatttgctattagatctgctcaaattggctctactgactgtaatgag
gttgaaattaatgacgttcctccagttaaggaagttactcagcatatgctttgtagtcga
ggggaacatcatcttatacttgatgaagaaattgggttgatttgcaaatattgccttcat
gtgcatcgggagatcaagtatatggtaccagactttgctccaaacccttatggacgatct
ggcaagagatcctatgaagaagacaactggtctattcctgatgaggtacaatgtcatgaa
tctgggtctggccttacttccaatgctcatgtcgatggcacagtgtgggacttaatccct
ggtgttaaaagtagtgtgtatcctcaccagcgtgaaggttttgagtttatttggagtcaa
atagctggtggaattcatcttgaacagttgcaaaacactagtgctgatggtgggggtggt
tgcataatatcacatgcccctggaacagggaagacacgtctaaccattgtctttcttcag
gcatacatgaaatttaaccccaaatgcaggccactgataattgctcctcgtaccatgctt
cacacctgggaagaggagtttaaaaaatggggctttgaaataccctttcacaatcttaac
aatcagagtttatcaggaaaggagaataaagcagcccttgagattttggttcaaaatata
ggccagcgccgtgtgaaaaaaatggaaagtagtcgttggttgaagttatattcctggaac
aaggaaagaagcatccttggtattagttacagagtttttgagaaactttatacggagcat
aatcctggagacaagaaagctggcctagctgagaaaatgaggaacattctgctagatttt
cctggtattgtagtcttcgatgaagggcatacacctcgaaatgataaaagtcatatgtgg
aaggcttcatcaaatatcaaaacacatagacgtataattctctcaggaactcctttccaa
aacaattttgatgagctgtacaatacaattcgcttggcaaggccagactggatcgggcat
acatgcagtgccagagataaagcaaagcaagccaagaaaataagagctgaaattgccccg
attgtgcatgtttacagaggttccatactacgagatgcacttcccggattgaggaactca
attgttgttttacagccaaacaagttgcagaaagaaatttcaatgaaaattcaagagaag
aaagatcttccattctttaaagttgaacattatgagactttaatatctgttcatccttcg
gctttgctcaacctggagaaggacacgagggtatcctttcttaatcatgttgacttgaag
aaactaaaggaaaaaagatcaaatcctgaatctgggatgaaggcaaagtttgtgattgag
ctcatacggctgagtgatgcaatgaaggaaagagttctggtgttcagtcagtatattaat
gccttgaccattttaaaggagcttttgaaatctcagtttcagtggaatgaagagaacgag
attctgtttatgagtggagcagaaaaatcaaagcagcgccaatcatcaatgaaggctttt
aatgatccactaagcagagccaaggtattattagcttctaccaaaggttgtaacgaagga
ataaatttggttggagcttcaagagttgtacttctagatgttacatggaacccatcggtt
gagaggcaagctatatctcgagcgtaccgactgggacaaaagaaaattgtgttcatctac
cacctcctcttggctgggcaaagagaagaggacaaacacagtaggcaaattgataagcat
cggttgtcggaattggtattttcttcttctgataaggaagctgccaagaaaatcccagct
gtggttgccgaggatacaattttggaagagatggtgaaccatgagaaactcaaacatatg
tttgaaaagataaccttactggatgaagcctcatggtttgactaa
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