Argentina anserina (silverweed cinquefoil): 126795031
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Entry
126795031 CDS
T10558
Name
(RefSeq) autophagy-related protein 16
KO
K17890
autophagy-related protein 16-1
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans04136
Autophagy - other
aans04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
126795031
04136 Autophagy - other
126795031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aans04131
]
126795031
03029 Mitochondrial biogenesis [BR:
aans03029
]
126795031
Membrane trafficking [BR:
aans04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
126795031
Others
Specific organelles associated proteins
Auto phagosome
126795031
Mitochondrial biogenesis [BR:
aans03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
126795031
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_TEP1_2nd
DSE1_N
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_VPS8
Beta-prop_WDR41
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
ATG16
ASA1
Beta-prop_SCAP
CFAP251_N
Beta-prop_IFT140_1st
Beta-prop_ACSF4
Beta-prop_DCAF4
Beta-prop_Aladin
Beta-prop_HPS5
Beta-prop_NWD2_C
WDR54
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_NOL10_N
Beta-prop_SPT8
PROPPIN
Beta-prop_NUP159_NUP214
eIF2A
Cytochrom_D1
Beta-prop_Vps41
Beta-prop_DCAF12
TRM82_WD
PQQ_2
VP7
Small_EgtBD
DUF5074
UPF0688
Beta-prop_RIG_1st
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
126795031
NCBI-ProteinID:
XP_050377799
LinkDB
All DBs
Position
5:5367539..5370421
Genome browser
AA seq
507 aa
AA seq
DB search
MSQDEVARRAIRHALKALRKRHLLEEGAHAPAYTALANPIAHQGSEWKEKAETLELELQQ
CYKAQSRLSEQLVVEVAESRSSKALLEEKEAAITDQLNELTQKRDECSQLKAELEKKTEA
LELVMSENNEIRAQLEEMSVRAKNAEAETKVLIDRWMLEKMKDAERLNEANALYEDMLER
IKVSGLQTLARQQVDGVVRQSEEGAEYFVESTNPSTCKNRVNAHDGGCASILFEYNSGKL
ISGGQDGTIKKWDTSTGALTNTLHGCIGSVIDLSITHDNKYIIAASSSNKLYVWDANSGR
VQHTLTGHTDKVCAVDVSKFSSRHIVSAAYDRTIKVWDLQKGYCTNTIIFPKYCNALCFS
MDEQTICSGHVDGNLRLWDIHKGKLLNEVAAHSSAVTSISLSRSGNMILTSGRDNVHHLF
DMRTLEVCGTLRGNRVASNWSRSCISPDDQYVAAGSADGAVYIWSIAKADIVSTLKEHTN
SVLCCSWSGHGLPLASADKNGVICTWT
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaggatgaggttgctaggagagcgattaggcacgcgctgaaggctctgcggaag
cggcatttgcttgaagaaggtgctcatgctccggcgtacaccgctctcgccaatcccatt
gctcatcagggatcagaatggaaggagaaggcggagacgttggagctcgagcttcagcag
tgctacaaggctcaatctcggctgtcggagcagcttgtggtggaagtagcagagtccagg
tcttcaaaagctctactcgaggagaaagaggcagcgattacggatcagctgaacgagctg
acgcaaaagagggatgagtgctctcagttgaaggcggagttagagaagaagactgaagct
ctagagttggttatgagtgagaacaatgagatacgggcgcagctagaagaaatgtctgtt
agagccaagaatgccgaagctgaaactaaggtgttaattgaccgttggatgttggaaaag
atgaaggatgctgaacgcctaaatgaggcaaatgccctatatgaagacatgcttgagcgg
atcaaggtcagcggtttacaaacacttgccaggcagcaagtagatggtgtggtccgccaa
agtgaagaaggtgctgaatactttgtggagtcaaccaatccctctacatgcaagaacaga
gtcaatgcccatgatggcggctgtgcttccatattattcgagtacaattcaggtaaattg
atctctggtggacaagatgggacaattaaaaagtgggatacaagtacaggggctttgact
aatacactccatggttgcattggttctgttattgatctttccattacccatgataataaa
tatatcatagcagcaagtagttcgaacaaattgtatgtgtgggatgctaactcagggagg
gttcaacatactctcacgggtcacacagataaagtgtgtgctgtagatgtcagcaagttc
tcaagtcgacacattgttagtgcagcttatgatcgtaccataaaggtttgggatttgcag
aaaggctactgcacaaacacaattattttccccaaatactgcaatgctctctgtttcagc
atggatgaacagaccatttgctcaggtcatgtggatggaaatcttcgactttgggatatt
cataaagggaagctgctcaatgaagtggctgcacactcaagtgcggtaacctctatatcc
ttgtcgcgaagtggcaacatgatattgaccagtgggagggacaacgtgcatcaccttttt
gatatgagaaccctagaagtttgtgggacgttgagaggaaacagagtagcatccaactgg
agcagatcttgtatcagtcctgatgaccaatatgttgcagctggatctgctgatggtgct
gtctacatctggtctatagccaaagctgacattgtgagtaccctgaaggagcacacaaac
tctgtcctctgctgctcatggagtggacatggattacctctagcttctgcagacaagaat
ggagtcatttgtacttggacttga
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