Argentina anserina (silverweed cinquefoil): 126795163
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Entry
126795163 CDS
T10558
Name
(RefSeq) protein SPA1-RELATED 2 isoform X1
KO
K16240
protein suppressor of PHYA-105 1 and protein SPA1-related 2
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
126795163
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aans04121
]
126795163
Ubiquitin system [BR:
aans04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
126795163
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_TEP1_C
EIF3I
Beta-prop_HPS5
Pkinase
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR35_TULP_N
WD40_like
Beta-prop_DCAF12
PK_Tyr_Ser-Thr
WD40_RFWD3
WDR90_beta-prop_4th
DUF7082
Motif
Other DBs
NCBI-GeneID:
126795163
NCBI-ProteinID:
XP_050377952
LinkDB
All DBs
Position
5:6860679..6867226
Genome browser
AA seq
1015 aa
AA seq
DB search
MENAVGGEGAAPDQMDGAQLQIKENEHALRLKNGHMFDCQEMRMPGDEDHSLRIPVGSTC
VESSSQDVMKPYDGLRLYPSGSTSWNGGSSRVHNASVDYGQVRSSDLDNVEYPSLDKIIA
QRENDDNLVEVVAELTNTTEGGASGDSCGGIRTKMLSKSRSEFYVKTTLKGKGVVFKGPK
HDGGRVEIKNLNSTKVAGGFKATSDPKHSLDANSMPSSNIVMPSSNDEISLRDWLRIECP
KVNKVECLYVFKQIANLVDRFHSQGVVLQELRPSFFKLSSLNEVKYVGLPIPKEILESSM
DKGICHSENSSMRKMSVDHDFALVGSSAKKQKINQSTGLVRQWPQFPTTSCFPRETSNAG
HFNNNLQNRSSHLYSAQQHLTSITEQLEEKWYISPEELNDGSCTVLSNIYSLGVLFFELL
AQFDSNNAVVTAMFNLRHRILPSNILSENAKESGFCLWLLHPDPSSRPTTREILQSEVIN
GLQEVCEEKVASSVVEEDAELELLSHFLMVMEEKKQKDAFKLMESIRALEADVEEAERRH
CPRKSLIDPDWFKESLGGWKNACAEASRSEILSPLPPIPSTNESRLTRNIDQLESAYFSM
RKKIQPAEADCTLRIDNELLKTRKNWYMESEGDGKKTPTDHLGAIFDGLCKYNRYSKFEV
CGTLRNGDFNSNSNLICSLSFDRDEDYIASAGVSKKIKIYEFNALFNDSVDIHYPSIEIS
NDTKISCICWNNYIKNYLTSTDYEGLVKLWDVSTGQEFARYRGHEQKAWSVDFSQVDPTK
LASGSDDGSVKLWSINEKNCVGTIRNRNFANVCCVQFSAHSTNLVSFGSADYNTYCYDLR
NARMPWCVLVGHQKSVSYVKFLDSETIVSASTDNTLKLWDLNKTTASGLSTNACSNTLCG
HTNEKVDPPTIFFFFYVRVYSFCSDTLIAYSQNFVGLSVSDGYIACGSETNEVYAYYRSL
PMPITSHKFGSIDPVTGKETDDISGPFVSSVCWRQKSKMVVAANSSGCIKVLQIV
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atggagaatgcagtaggcggggaaggggctgcaccggatcagatggacggggcgcagctt
cagattaaagagaatgagcatgcattgagacttaagaatggacacatgtttgactgccaa
gagatgcggatgcctggcgacgaggatcattcattgcgtataccagttggaagcacttgt
gtggagagctcgagtcaggatgttatgaagccgtatgatgggttaaggttgtatccgagt
ggatcaacgagctggaatggtgggagttcacgagtccataatgcgagtgttgattatggt
caggtaagatcaagtgatttggacaatgtggagtacccatctttggataaaattattgct
caaagggaaaatgatgacaatctggttgaagttgtggcagagttgacaaataccacggaa
ggaggggcttcaggcgattcatgcggaggtattcggacaaaaatgctttccaaatcaaga
tcagaattttatgttaagactactttgaagggtaagggtgttgttttcaaaggtccaaaa
catgatggcggccgtgttgaaattaagaaccttaacagtacgaaggttgccggtggtttc
aaggctacttctgatccaaaacacagtttggatgccaattctatgccttcttccaacatt
gttatgccttcttccaatgatgaaatcagtttaagagactggctgagaatcgagtgtcct
aaagtcaataaagttgagtgcctgtatgtattcaaacaaattgcaaatcttgtggatcgt
tttcactctcaaggagttgttttgcaagaattgcgcccttctttttttaagttgtcatct
ttgaatgaggtcaagtatgttggcttaccaatcccaaaagagatactggaaagttctatg
gataaaggtatctgtcattcagaaaatagttcaatgaggaaaatgtcagtggaccatgat
tttgctttggttggttcaagtgcaaagaagcaaaagattaaccagagcactggattagtg
aggcaatggcctcagttccccactacttcctgcttcccgcgtgaaactagcaatgctggc
cacttcaacaacaatcttcaaaatagaagttctcacttgtatagtgctcaacaacacttg
acttcaatcactgagcaattggaagaaaagtggtatatcagtcctgaagaactcaatgat
gggagctgtacagttttgtcgaatatctacagtctgggtgttcttttttttgagttgctc
gcgcaatttgactcaaataatgccgttgtcacagcaatgttcaatctgcgtcatagaatt
cttccttcaaatattctgtcagaaaatgctaaggagtctgggttttgtctttggttactt
catcctgatccgtcttcacgtccaacaacaagggaaatcctacaatcggaagtaattaat
ggattacaggaggtgtgtgaagagaaagtggcatcttctgtggttgaagaggatgctgaa
ttggaactactctcgcatttcctcatggttatggaagaaaagaagcagaaggatgccttc
aagttgatggaaagcataagagctttagaagcagatgttgaggaagctgagaggaggcac
tgtccaagaaaatccttgattgatcctgactggtttaaagagtccctgggtggatggaaa
aatgcatgtgcagaagcttcaagatcagagatactttctccattaccccctattcctagt
acaaatgagtcaaggttgacaaggaatattgatcagcttgagagtgcttacttctctatg
agaaagaagattcagcctgctgaagctgattgtactttacgcattgataatgagttatta
aaaactcgcaaaaattggtatatggagtcagagggcgatggaaagaagactcctaccgat
catttgggagctatctttgatggtttatgcaagtataatcggtacagtaagtttgaagta
tgtggtactctaagaaatggtgatttcaacagtaactcaaatttgatttgctctttgagt
tttgatcgggatgaggactacattgcttctgctggggtttcaaagaaaataaaaatttat
gagttcaatgctctgttcaatgattctgttgatattcattatccatcaattgagatttca
aatgatacaaagattagctgtatatgctggaacaactacataaagaactatctcacttca
actgattatgaaggtttagtgaagttgtgggatgtgagcactggtcaagagtttgctcga
tacagagggcatgaacaaaaggcttggtctgttgacttttctcaagtagatcctacaaaa
ttagccagcggaagtgatgacggttctgtgaaactatggagcattaatgagaaaaactgt
gtaggcactatcagaaacagaaactttgcaaatgtatgctgtgtacagttctctgcccac
tccactaatttggtgagcttcgggtctgcagactacaacacatattgctatgatcttcgt
aatgctagaatgccctggtgtgtattggtcggtcaccagaaaagcgtaagctatgttaaa
ttcttggactcggagaccattgtttctgcatccactgacaacactttaaagctatgggat
cttaacaaaactactgcaagtggtctatccaccaatgcttgcagcaataccctctgtggg
catacaaatgagaaggttgatcctcccaccatctttttttttttttatgttagagtttat
tcattttgcagtgacactctgattgcatactctcagaactttgtgggcttatccgtttct
gatggttatatagcatgtggttcagaaacaaatgaggtttatgcttattatagatctctg
cctatgccaatcacttcacacaaatttggctccattgatcctgtaactgggaaggagact
gatgatattagtggaccatttgtttcaagtgtctgctggagacagaaatcaaaaatggtg
gttgctgcaaattcaagcgggtgcataaaagtgttgcagattgtttaa
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