Argentina anserina (silverweed cinquefoil): 126796032
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Entry
126796032 CDS
T10558
Name
(RefSeq) LOW QUALITY PROTEIN: probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
aans Argentina anserina (silverweed cinquefoil)
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
126796032
Enzymes [BR:
aans01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
126796032
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
RhgB_N
Endotoxin_C
Motif
Other DBs
NCBI-GeneID:
126796032
NCBI-ProteinID:
XP_050378750
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Position
5:25004383..25011567
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AA seq
742 aa
AA seq
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MSTFPVGLGKGPSLPIVSLSTITWISAKLATMILLLFSSRSFLDGDAFIHAAASENTTGL
QLHIFNQYVVMDNGILQLNLSKPEGMVTGIRYKEISNLLEVLADETNRGYWDLVWSAPEI
TRKKGAFDRIEGTNFTVIVETEDQIELSFTRMWDPSQEGKAVPLNIDIRFVLLRNSSGFY
TYAIYEHLKEWPAFNLTNTRTVFKLRKDKFQYMALSDTRQRHMPLPDDRSAGRGQSLAYP
EAVLLVNPVEPEFKEEVDDKYQYSIENIYNRVHGWIANDSQVGFWQITPSEEFKSGGPFK
QCLTSHVGPTTLAIFHSTHYSGEELILQFESNEPWKKVFGPVFFYLNSLVDGTNPYQRLW
EDAKHQMNNEVERWPYDFPASMDFLSPKQRGTVSGRLLIRERYVTDDKDVPGNGTLVGLA
APGVVGSWQLECKGYQFWTKADDSGYFSIRGVRPRTYNLYAWVPGFIGDFRYASEIVITA
GLPLLRSFSYFVLVDYYTLSLLVNCTSNPKLLXFYXAADGNVDVGTLVYEPPRTGPTLWE
IGIPDRTAAEFYVPAPNPKYINKLYVNHTDRFRQYGLWERYAELYPDNDLVYTVGVSDYR
NDFFFAQITRKTSNNTYKGSTWQIRFNLENVDKNNTYNLRISLATAHVSELQVRINDPET
KNPPLFTTGEIGNDNTIARHGIHGLYRLYNVDIPSASLIEGNNTIFLTRELSVSPFQGIM
YDYLRLEGPPPSNDNNNIRFSS
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacctttcctgttggattaggcaaaggtccaagccttcccattgtttcgctttcc
acaataacatggatttcggcgaagttggctaccatgattcttctcctcttctccagccgg
tcatttctggatggagatgcattcatccatgccgctgcttcagaaaatacaacaggccta
caactgcatatcttcaatcaatatgtggtgatggataacggcattctccaactcaacctt
tcaaagcctgaggggatggttactggaatacgatataaggagatcagcaatttgcttgaa
gttcttgcagatgaaaccaatagagggtactgggatttggtatggtccgcaccagaaatt
acgagaaagaaaggcgcatttgataggatcgaaggaacaaattttacggttatagtagaa
actgaggatcagatagagctatcattcaccagaatgtgggatccttctcaagagggcaaa
gctgtccccttaaatattgacataaggttcgtgttgcttcgtaactcgtcgggtttctac
acttacgccatttatgaacacttgaaggaatggcctgctttcaacttgaccaataccagg
actgtgtttaagctcaggaaagacaagtttcagtacatggcactgtcagacaccaggcaa
agacacatgccccttcccgatgatcggtcagccggaagagggcaatccctggcttacccg
gaggccgtcttgcttgtcaatccagtcgagcccgagttcaaagaagaagtggatgataag
tatcaatattcgattgagaacatatataatcgagtgcatggatggatagcaaatgactcg
caggttggattctggcagatcactcccagtgaagagttcaaatctggaggacccttcaag
cagtgcctcacttcacatgtggggcccactacccttgccatatttcacagcacacattac
tcgggagaggaactgatattacaatttgagtccaatgagccatggaagaaagtgtttggt
cctgtttttttctatcttaattctttggttgatggaaccaacccttaccagcgtctatgg
gaggatgctaaacaccagatgaacaatgaagttgaaaggtggccatatgattttccagct
tccatggactttctgtcgcctaagcaacgaggtacagttagcggcagattattaattcga
gaaaggtacgttacggatgacaaagacgtacccggaaatggaactttggttgggttggca
gctccaggagttgttggatcatggcagctagaatgcaagggttaccaattctggaccaaa
gcagacgatagcggctacttctccattcgtggcgtacgtccaaggacctataatctttat
gcatgggttcctggttttattggtgatttccgatatgcttctgaaattgttattactgca
ggtcttcctctacttcgatctttttcttattttgtgttggtagattattatacattatca
ttactagttaattgtacgtctaatcctaaattactgtaattttattaagctgcagatggt
aatgttgatgtgggtacacttgtttatgagcctccgagaactggcccaactctgtgggaa
ataggcatccctgatcgaactgctgcagaattttatgtcccagctcctaatccgaagtac
attaacaaactctacgtcaatcacactgacaggtttagacaatatggattgtgggaaaga
tatgcagagttatatcctgacaatgacttggtttacacagttggagttagcgattataga
aatgatttcttctttgctcagattaccaggaagacaagtaataacacatacaaaggatca
acatggcagattaggttcaacctcgagaatgtggacaagaacaatacctacaacctgcga
atatcacttgcaacagcccatgtttctgaattacaagttcggatcaatgacccagaaaca
aagaatcctcctttatttactactggagagattggcaacgacaacacgatcgcgaggcat
ggaattcatggactctacaggctatacaatgtggacattccaagcgcttcactgatcgaa
ggaaacaataccatatttctaactcgagaattgagtgttagcccttttcagggaatcatg
tatgattatcttcgcttagaaggccctccgccttctaatgacaacaataatattagattc
agttcatag
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