Argentina anserina (silverweed cinquefoil): 126796299
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Entry
126796299 CDS
T10558
Name
(RefSeq) cleavage stimulation factor subunit 77 isoform X1
KO
K14408
cleavage stimulation factor subunit 3
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126796299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aans03019
]
126796299
Messenger RNA biogenesis [BR:
aans03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
126796299
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
PRP6_TPR
HAT_Syf1_CNRKL1_C
TPR_19
TPR_15
TPR_2
TPR_9
TPR_YpiA
CFAP70_mid_TPR
TPR_8
TPR_16
TPR_Slam
Adeno_E3
Motif
Other DBs
NCBI-GeneID:
126796299
NCBI-ProteinID:
XP_050379050
LinkDB
All DBs
Position
5
Genome browser
AA seq
768 aa
AA seq
DB search
MEIEKRVDDLGPKAMEDKYNVEATENQANEALRLPITEAAAIYEQILTVFPTAAKYWKQY
VEAQIAVNNDDATKQIFSRCLLICLQVPLWRCYIRFIRKVNDKRGVEGQEETRKAFDFML
SYVGADIASGPVWMEYIAFLKSLQALSTQEESQRMTAVRKAYQRAIITPIHHIEQLWKDY
ESFENSVSRHLAKGLLSEYQPKFNSARAVYRERKKYVDEIDLNMLAVPPTGSYKEELQWI
AWKKLLGFEKGNPQRIDNGSSNKRIIFTYEQCLMYLYHYPDIWYDYAMWHANSGSIDAAI
KVFQRALKALPDSEMLRYAYAELEESRGAIQPTKKIYENLLGDGVNTTALAHIQFIRFLR
RTEGLEAARKYFLEARKSPNCTYHVYVAYAMVALCLDKDPKMAHNVFEAGLKHFMHEPVY
ILEYADFLTRLNDDRNIRALFERALSSLPPEKSVEVWKQFAKFEQTYGDLASMLKVEQRK
KEALSTTDDEGPSSLESSLQEVASRYSFMDLWPCSTKDLDHLARQEWLAKNINKKGEKSA
MLSGPERTDKGSTGLTSNSSVSAKVVYPDTNQMVIYDPRQKPGVVNFQTTTAAGVLAASS
TLSNPVVAAVGGQTTGAFDEILKVTPPAVVAFLASLPIIEGPIPDVDVVLSICLQSDIPT
PQPAKSGTAPLQFPSVPAPSTSDLSVSSKSHPVPSGSSFKPARGKRKIIDRKDDDETTVQ
SQPLPTDAFRMRQIQKASRSVSASRTASQTGSASYGSALSGDFSGSTG
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcgaaaaacgagtcgatgatctaggtcccaaggccatggaggacaaatacaat
gttgaagccactgaaaaccaagccaatgaagcattgcgtttgcctatcacagaggcagca
gccatatatgagcagattctgacggtgtttcccactgctgcaaagtattggaagcaatat
gtggaggcccagattgctgttaataatgatgatgctacaaaacagatatttagccggtgt
ttgttgatttgtcttcaggttccactttggcgatgctacattcgtttcatcagaaaggtc
aatgacaagaggggggtagagggtcaagaagagactagaaaagcttttgattttatgctc
agttatgttggagcagatatagcatctggccctgtatggatggagtacatcgcattctta
aagtctttgcaggctctaagcacacaggaagagtcacaacggatgactgctgtacggaaa
gcataccagagagccattatcactcccatccatcacattgaacaactatggaaggattat
gaaagttttgaaaattctgtcagccgccatctggcaaaaggactgttatctgaatatcaa
ccaaaatttaacagtgccagggccgtttatagggagcggaagaagtatgtggacgaaatt
gacttgaatatgcttgctgtaccaccaactggctcttacaaggaagaattgcagtggata
gcgtggaaaaagttgctcggttttgaaaaaggaaatccacaaaggatagacaatggatca
tccaacaagcgaataatattcacatatgagcagtgtctaatgtatctataccattatcct
gatatatggtacgattatgcgatgtggcatgcgaacagtggatcaatagatgctgcaatt
aaagtatttcaaagagcattgaaggctcttcctgactcagaaatgcttaggtatgcttat
gcagagctggaagaatcccgtggagcaattcagcctacaaagaaaatttatgagaacctt
ttgggagatggtgttaacacaacagcccttgctcatatacagtttattcgctttttgagg
agaactgaaggacttgaagcagctcgcaagtattttttagaagcgcgcaaatctccaaac
tgcacatatcatgtatatgttgcctatgcaatggtggcgttatgtcttgacaaagatccc
aagatggcgcacaatgttttcgaagctgggctgaaacactttatgcatgagcctgtatac
attcttgaatatgcagattttctaactcgtttgaatgatgatagaaatatccgggccctg
tttgagagggcattaagctcgctaccaccagaaaaatctgttgaggtatggaagcaattc
gccaaatttgagcaaacttatggagatttggctagcatgttgaaggttgagcaaagaaag
aaagaagcactttctacaactgatgatgaaggaccctcatctttagaaagttctttacaa
gaggttgcatctcgatatagtttcatggatctttggccctgctctacaaaggatttggac
catttagcccggcaagagtggcttgctaaaaatattaataagaaaggggagaagtcagct
atgctaagtggacctgaacgtacagacaagggttctactggcctgacaagcaattcatca
gtgtctgcgaaagtagtttatccagatactaatcaaatggttatctatgatccaaggcag
aaacctggggttgtaaattttcagaccacaacagcagctggtgttcttgctgcttctagc
accttgtcaaatccagttgttgcagcagtaggcggtcaaacaacgggtgcctttgatgaa
atattaaaggtgacaccacctgctgtggtagccttcttggcaagtttaccgatcattgaa
ggtccaatcccagatgtggatgttgtgctatcaatttgtttgcaaagtgacataccaaca
ccacagcctgcaaagtcagggactgcccctctgcaatttccatcagtacctgcaccttct
acgagtgacctttctgtttcaagcaagtctcatcccgtcccaagtgggtcatctttcaag
ccagccagggggaagcggaaaattatagacaggaaagacgatgatgaaaccacagtccag
agccagccactcccgacagatgctttcaggatgcggcaaatccagaaggcaagccgttct
gtttcggctagccgtacagcttctcaaacaggatcagcttcttatggaagcgcactttct
ggagatttttccggtagcactgggtaa
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