Argentina anserina (silverweed cinquefoil): 126796363
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Entry
126796363 CDS
T10558
Name
(RefSeq) LOW QUALITY PROTEIN: probable rhamnogalacturonate lyase C
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
aans Argentina anserina (silverweed cinquefoil)
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
126796363
Enzymes [BR:
aans01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
126796363
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
CarbopepD_reg_2
BsuPI
Motif
Other DBs
NCBI-GeneID:
126796363
NCBI-ProteinID:
XP_050379130
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All DBs
Position
5:24981272..24991801
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AA seq
1025 aa
AA seq
DB search
MAISDNRKRCIPLLDDRMSGRCQTLGFAEVVLLLDPINKELAGEVDDKYQYSCMNKDIXF
HGWVCSNPGVGFWQITPSDEFRSGGPLKQSLTSHVCPTTLAIFLSSHYAGQDLDAKFRGG
ESWKKVFGPVFXYLNSATGRDDPFFLWEDAKRQMMTEVQSXPYSFPASKDFQKSDQRGNV
NGRLLVLDRYVSEDYTPANEAYVGLAPPGDVGSWQRECKEYQFWTRADNRGYFSIRNMRT
GTYNLYAWVPGFIGDYRCEAVLNITSGFFTEMGDLMHDPPRDGPTLWDIGIPDCSAAEFY
VPDPDPKYINKLYVNHPDRFRQYGIXNRCTELYPDEDLVYIVGVSDYSKDWFFAQVPRHK
DNTHEGTTWQIKFKINNVDRNGTYKLRVAIASATLAEMQVMMDNGFVQVTLSNPEGIVTG
IRYNGLDNLLEIRNEETNRGYWDLVWSQASTGTTGIFDAIKGKEFEVIVENDDQVELSFK
RTWDSSQEGKLVPLNIDKRFIMVRGSSGFYSYAIYEHLQEWPAFMLGETRIAFKLRKDKF
QYMAMADNRQRYMPLPDDRLPPRGQPLAYPEAVLLADPVEPDLKGEVDDKYQYSCDNKDN
RVHGWICTDPPVGLWQITPSNEFRSGGPVKQNLTSHVGPTTLAMFLSAHYSGEDLVPKFA
AGEYWKKVFGPVFMYVNSEYEGNDPLVSLWEDAKIQMMIEVQSWPYSFPASEDFPKSNQR
GNISGRLLIQDRYVSDDYISANGAYVGLASPGGVGSRQRECKDYQFWTTTDDDGYFSIND
IRAGDYNLNACVPGFIGDYQYDDVITITSGGVVYMGELVYEPPRDGPTLWEIGIPDRSAA
EFYVPDPNPKYINNLFVSHPDRFRQYGLWDRYTELYPDADLVYTVGVSDYSKDWFFAQVT
RKKDDNKYXGTTWQIKFNCQDVEKNGTYKLRVALASATLSELQVRVNNPKENPPLFTSGL
IGKDNSIARHGIHGLYWLFKVDIPSSRLVEGDNSIFLTQPRSTGPFQGIMYDYIRLEGPP
SVSSE
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atggccatatcagacaaccggaaaagatgcattcccctacttgatgaccggatgtcaggg
cgatgccaaaccttaggttttgcagaagttgtcttacttttggatcccataaataaagag
cttgctggagaggtagacgacaagtaccagtactcatgtatgaacaaagacattnncttt
catggttgggtgtgtagcaacccaggagtcgggttttggcagatcacacccagtgatgaa
ttccggtctggtggacctctaaaacagagtctaacctcgcatgtttgccccaccactctt
gcaatatttcttagttctcattatgcgggacaagatctggacgcaaaatttagaggtggt
gaatcatggaagaaggtttttggtcctgtttttnattatctaaattctgcaactggtaga
gatgatccattctttctatgggaggatgctaaaagacaaatgatgactgaagtccagagc
tagccatatagtttcccagcttccaaggatttccagaagtcggatcagcggggtaatgtg
aatggtagactacttgtcttggacaggtatgttagtgaagactatactccagcaaatgag
gcttatgttggtttggccccaccaggagatgtaggatcatggcaaagagagtgcaaggag
taccaattctggacaagggcagacaacagaggttatttttcaattcgaaacatgcgtact
ggtacttacaatctctatgcctgggtccctggttttattggagattaccggtgcgaagct
gtccttaacatcacctcaggtttttttactgagatgggtgatctcatgcatgaccctcca
agagatgggcctacgttgtgggatataggcattcctgattgttccgctgcagagttttat
gttcctgatcccgatcccaagtatataaataagctctatgttaatcatcctgacaggttc
aggcagtatggtatttagaatagatgtactgaattatatccagatgaagatttagtctat
attgttggtgtcagtgattatagtaaagattggttctttgctcaagttcccaggcataag
gacaatacacatgaaggaacaacatggcaaattaagttcaaaattaacaatgtggatcga
aacggcacctataaactgagagtggcaattgcatctgcaactttagctgaaatgcaggta
atgatggataatgggtttgtccaagtgacattgtcaaatccagagggtatagtcactgga
atacgatacaatggccttgacaacttgctcgagattcgtaatgaggaaactaatagagga
tattgggacctggtttggagccaagcgagtaccggaacaacaggaatatttgatgcgatc
aaaggtaaagagtttgaggttatagtggaaaatgatgaccaggtggagctctctttcaaa
cgaacctgggattcctcccaagaaggcaagctcgttcccttaaatattgataaaaggttc
ataatggttcgaggttcttccggcttctactcttacgctatctacgagcacttgcaggaa
tggcctgcttttatgctcggagaaaccagaatcgcgttcaaactcagaaaagacaagttt
caatacatggccatggcggacaacaggcaaagatacatgccattgcctgatgaccgttta
ccacccagaggccaacctctggcatatccagaggcagttctactcgccgatccggtcgag
cctgatctaaaaggagaagtggatgacaagtaccaatactcatgtgataacaaggataac
cgggtgcatgggtggatatgcactgatccgccggtgggattgtggcaaattacacccagc
aacgagttccgatctggtggacctgttaaacaaaatcttacctctcatgttggcccaacc
accctggcgatgtttctgagcgctcattattccggagaagatctggtgccaaaatttgca
gccggggaatactggaagaaagttttcggtcctgtttttatgtatgtcaattcggaatat
gaaggaaatgacccgttagtttcactatgggaggacgctaaaatacaaatgatgattgaa
gtccagagctggccatacagcttcccagcatctgaagattttcccaagtcgaaccaacgt
ggtaacattagtggtcgactacttattcaagacagatacgttagcgatgactatatatca
gccaatggtgcatatgtcggattagcctcgccaggaggcgttggatcgaggcaaagagaa
tgcaaggactatcaattttggacaacgacagacgatgatggctacttttctatcaatgac
atacgggccggtgattataaccttaatgcatgtgtccctggttttattggagattatcag
tatgatgatgttatcactataacatctggtggtgtggtttatatgggtgagcttgtgtat
gagcctcccagagatggcccaaccttatgggaaataggcatcccagatcgttctgctgca
gagttttatgttcctgatcctaatcccaagtacatcaacaatctctttgtcagtcatcct
gacaggtttaggcagtatggactgtgggatagatacacagagttatatcctgatgcagac
ttggtttacacggttggtgtgagtgactacagcaaagactggttctttgctcaggttacc
agaaagaaagatgataacaaatattaaggaacaacttggcaaataaaattcaactgtcaa
gatgtagaaaagaatggaacctataagctgagagtggcacttgcatctgcaactctttct
gaattacaggttcgagtgaacaatccaaaggaaaatcctcctctattcacaagtggtttg
atagggaaggacaattccattgcaagacatggaatccacgggctctattggcttttcaag
gttgatataccgagctctcggcttgttgagggagacaatagcatctttctaactcaaccg
agaagcactggtccttttcaagggattatgtatgattatattcgcttagaaggtccccca
tctgtaagttccgaataa
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