Argentina anserina (silverweed cinquefoil): 126796418
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Entry
126796418 CDS
T10558
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
aans Argentina anserina (silverweed cinquefoil)
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aans03400
]
126796418
Enzymes [BR:
aans01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
126796418
DNA repair and recombination proteins [BR:
aans03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
126796418
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
DExH14_plug
ResIII
Helicase_C
AAA_22
DEXQc_Suv3
Helicase_PWI
T2SSE
Motif
Other DBs
NCBI-GeneID:
126796418
NCBI-ProteinID:
XP_050379201
LinkDB
All DBs
Position
5:complement(2087050..2105240)
Genome browser
AA seq
2085 aa
AA seq
DB search
MLVQLPRLTSSLREPFDVDRAYLQRKLILQNQTKPRQSSSSVDESELARKIVHGWGEASY
ELRQAYKQFIGAVVELIDGEVQSEEFREVALAVYRLFGRPEEDGSVETNFSGKKQEVQML
MGHTVSDASMRKVASLAQELSRMQSSDHGITLVSETPANGTHDNAEFGADLVFHPPARFL
VDVSLDDGDSFSEAMAGPSPYSEGSYGHSGSIGLHSAADGRSINLSWLQDACDQITKSST
QLSRDELAMAICRVLDSDKPGDEIAGDLLDLVGDSAFETVQDLISHRKELVDAIHHGLLV
MKADKSSLTSQPRMPSYGTQVTVQTESERQIDKLRRKEEKRNRRGTEYGTDSELAGVNFS
SLLQASERKNIFDDLSGLGEGISVNALPQGTQRKHHKGYEEVLIPPTPGAQMKPGEKLVE
ISELDDFAQAAFRGYKSLNRIQSRIYHTVYNTNENILVCAPTGAGKTNIAMISILHEIGQ
HFKDGYLHKDEFKIVYVAPMKALAAEVTSTFSHRLSPLNMIVRELTGDMQLSKNELEETQ
MIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVESSQS
MIRIVGLSATLPNYLEVAQFLRVNPEAGLFYFDSSYRPVPLAQQYIGITETNFVAKMELL
NEICYKKVAESLRQGHQAMVFVHSRKDTAKTAQKLVELARKFEGLELFKNDQHPQFSLIQ
REVKKSRNKDLVELFEFGIGIHNAGMLRSDRGLTERLFSDGLLKVLVCTATLAWGVNLPA
HTVVIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHDKLAYYLRLL
TSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMRLNPLAYGIAWEEV
MSDPSLSLKQRSLVSDAARDLDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSSVETYNE
MLKRHMNETEVIDMVAHSSEFENIVVREEEQNELEMLVRKMCPLEVKGGPSNKHGKISVL
IQVFISRGSIDSFSLVSDAQYISASLARIMRALFEICLRKGWSEMTLFMLEYCKAVDRQV
WPHQHPFRQFDRDISAQIIRNLEERGADLDRLYDMEEKEIGKLVNYGPGGRLVKQYLGYF
PWIQLAATVSPITRTVLKVDVLITPDFIWKDRFHGTAQRWWILVEDSENDHIYHSELFTL
TKRMAKGEPQKLTFTVPIFEPHPPQYYIRAVSDSWLHAEAFYTISFHNLALPEAHSSHTE
LLDLKPLPVTSLGNSTYEALYKFSHFNPIQTQTFHVLYHTDNNVLLGAPTGSGKTISAEL
AMLRLFNTQPDMKVIYIAPLKAIVRERMNDWRKRLVSQLGKKMVEMTGDYTPDLMAILSA
DIIISTPEKWDGISRNWHSRTYVKKVGLMILDEIHLLGADRGPILEVIVSRMRYISSQTE
REVRFVGLSTALANAGDLADWLGVGETGLFNFKPSVRPVPLEVHIQGYPGKFYCPRMNSM
NKPSYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQYAASDEHPRQFLSIPEEELQMVLY
QVADSNLRHTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVI
IKGTEFYDGKTKRYVDFPITDILQMMGRAGRPQFDQHGKAVILVHEPKKSFYKKFLYEPF
PVESSLREQLHNHINAEIVSGTICHKEDALHYLSWTYLFRRLMFNPAYYGLDNTDTEVLS
SYLSRLVQNTLEDLEDSGCIKMNEDSVEPMMLGSIASQYYLSYMTVSMFGSNISSDTSLE
VFLHILSAASEYDELPVRHNEENYNQALSERVRYKVDKDRLDDPHVKANLLFQAHFSQLE
LPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSVTCMHLLQMVMQGLWFDEDASLW
MLPCMNVELADSLCKRGIFRIQQLLDLPKATVQNMIGNFPASKFFQDLQLFPRIEVKLKI
LRKDGGKSCSLNIRLVKTNFRKNKSRAFTPRFPKVKNEAWWLVLGNTSTLELYALKRVSF
SDHLVTNMELPSDSTTFQGMKLMLISDSYLGLEQERSVSQLYEGQ
NT seq
6258 nt
NT seq
+upstream
nt +downstream
nt
atgctggttcagcttccgcgactgactagctctctgagggagcccttcgacgtcgaccgg
gcctatttgcagcgcaagctcatccttcaaaaccagaccaagcctcgccaatcatccagc
tcagttgatgagtcggagctcgcacgaaagatagttcatggatggggggaagcttcgtat
gaactacggcaagcttacaagcagttcattggagctgtggtggagttaattgatggagaa
gttcaatccgaggagtttcgtgaggtggcgcttgctgtttaccggctatttggcaggccg
gaggaggatggcagtgttgaaactaatttttccggaaaaaagcaggaagtgcaaatgctt
atgggtcacacagtttcagatgctagcatgcgtaaagttgcgtctttagctcaggagctt
tctaggatgcagtctagtgatcatgggattacacttgtttcagaaacacccgcaaatgga
actcatgacaatgcagagtttggtgccgaccttgttttccatccaccagctcggtttttg
gtagatgtttctttggatgatggggattcattttctgaggcaatggctggaccctcccct
tattctgaaggatcatatggtcacagtggctcaattggtcttcattctgctgctgatggg
cgcagcatcaatctgagttggctacaagatgcatgtgatcagataacaaaaagttctaca
cagctttctcgagatgaactggcaatggccatatgtagggtgcttgattctgacaaacct
ggtgatgagatagcaggtgacctgttggatcttgttggggatagtgcatttgaaactgtt
caagacctcatatcacatcgaaaggaacttgttgatgcgatccatcatgggttactagta
atgaaagctgacaaatcatctctgacctcccagcctcgcatgcctagttatggcacacag
gttactgttcagacagaatctgaacggcagatcgataagcttcggcgcaaagaggaaaag
cgaaatagacgaggaacagaatatggcactgatagtgagctggctggtgttaatttttct
tctctactgcaagcaagtgagagaaaaaatatttttgatgatctatcggggcttggtgaa
ggaatttccgttaatgctcttcctcaaggaacgcagaggaagcaccacaaggggtatgaa
gaggtcctaattcctccaacaccaggagcacaaatgaaacctggagaaaagctggttgag
atatcagagttagacgactttgctcaagctgcttttcgtggatacaaatctttgaatcgc
attcagagccgaatatatcacactgtttacaatacaaatgagaatatactagtttgtgct
ccaacaggagctggcaagacaaacatagctatgatttccattctacatgagattggacaa
cacttcaaagatggttacttgcacaaagacgagttcaagatagtttatgttgcacctatg
aaggcgttagctgcagaagtcacatcaacttttagtcatcggttatctccattgaatatg
attgtgagagaacttactggagatatgcaactctctaagaatgaacttgaagagactcag
atgatagttacaacacctgagaaatgggatgtcattactcgcaagagcagtgacatgtca
ctttcaatgctggtgaagctcctaataattgatgaagttcatctattgaatgatgataga
ggccctgttattgaggcattagtcgctcggactttacgtcaggtggagtcttcacagtca
atgatacgcattgtgggactttccgccactctacccaactatttggaggttgcacagttc
ctgagagtgaatccagaggcaggactcttctactttgattctagctatcgtccagtgccc
cttgcacaacagtatattggcatcactgagacaaactttgtagccaaaatggaattgttg
aatgagatatgctacaagaaggttgctgagtcactaaggcaaggtcatcaggcaatggtg
tttgtccattctcgaaaggacacggctaaaaccgctcagaagctggttgaactagctcgc
aaatttgaaggactggaactctttaagaatgatcagcatccacagttctcattgatccag
agagaagttaaaaaatccagaaacaaagatcttgttgaactttttgaattcggcattgga
attcataatgctgggatgttacgttctgatagaggtctgactgagcgccttttctctgat
ggactattgaaggttcttgtttgtacagcaactttggcatggggtgtaaatctaccagct
cacactgttgtgataaaggggacccaattatatgatccaaaggccggtgggtggcgagac
ctgggaatgcttgatgttatgcagatatttggacgggctgggagaccacaattcgataaa
agtggtgaaggcattataatcacgtctcatgacaaactggcctactatctgcggttactg
acgagtcaacttcctattgaaagtcagttcattagttccttgaaggacaatttaaatgca
gaggtggcacttggtactgtcaccaatgtcaaggaagcttgtgcatggcttggatataca
tacctttttataaggatgaggctcaatcctttggcatatggtatcgcatgggaagaggta
atgtcagatccttccttaagtttaaaacagagatcgcttgtatcagatgctgcgcgtgac
cttgacaaagcaaaaatgatgcgatttgacgagaaaagcggaaacttctattgtacagag
cttggtcgcatagcaagccacttttatattcaatattctagcgttgaaacctacaatgaa
atgttgaagcgtcacatgaatgaaactgaggtaattgacatggtagcccactcctcagaa
tttgaaaatattgttgttcgagaagaggaacaaaatgagcttgagatgttggtgcgaaaa
atgtgtccacttgaagttaagggtggtccttcaaataaacatggaaagatttccgttctc
attcaggtgttcatttctagaggctcaattgattccttctctttggtttctgatgctcaa
tatataagtgcaagtttggcacgtattatgagggccttatttgagatatgtttgcgaaaa
ggctggagtgagatgacattgttcatgttggaatattgcaaggcggtggaccgccaagtt
tggccccatcaacatcctttcagacaattcgacagggatatttcggcacaaataatccga
aatcttgaggaacgaggggctgatctagatcgactgtatgacatggaggaaaaagagatt
ggaaagctggtcaattatggacctggaggaaggttggttaagcaatatttgggatatttt
ccatggatccagttagcagctactgtaagtccaattaccagaactgttttgaaggtggat
gtgcttattacgccagactttatatggaaagatcgatttcacggcactgcccagcgttgg
tggattctagttgaggattctgagaatgatcatatctaccactcagagctattcactcta
acaaagcgaatggctaaaggggaacctcagaagctcactttcactgtaccaatatttgag
cctcatccaccacagtattatattcgtgctgtttctgattcttggttgcatgcagaggcg
ttctacaccatttcttttcataatttagcacttccggaggctcatagttcacatacggaa
ctgctagatttgaagccactccctgtgacgtctcttggaaacagtacttatgaagcattg
tacaaattttcacattttaatccgatacaaacacagactttccatgttctgtatcacaca
gacaataacgtattgctgggagctcccactggaagtggaaaaactatttcagctgagctt
gctatgcttcgtctcttcaacacgcagcctgatatgaaggtcatttacatagcacctttg
aaggctattgttcgagaaagaatgaacgattggaggaagcgccttgtctctcagctaggg
aagaaaatggttgaaatgacaggagattatactccagatctgatggctatcttgtcagca
gatattataatatcaactcctgagaaatgggatggtatcagtcgtaattggcatagtcga
acctatgttaaaaaggttgggcttatgattttggatgagattcacttgttgggagctgac
cgtgggcctattctcgaggttattgtatctaggatgagatacatatcctcacagacagag
cgtgaagtacgttttgtaggcctttctacagctctggcaaatgcaggagatttggctgat
tggttgggtgttggagaaactggactctttaatttcaaaccaagtgtgagacctgtaccc
ctcgaagttcacatccagggatatccaggaaagttctattgtccaaggatgaatagcatg
aacaaaccatcgtatgctgctatatgcacccattcacctacaaaaccggttctaattttt
gtttcttcacgtcgacagacaaggcttactgcattggacctcattcagtatgcagcttca
gatgaacatccaaggcagtttcttagcataccagaagaagaactgcagatggttctttat
caggttgccgatagtaatctgaggcacaccttgcaatttggcattggattacaccatgct
ggtctgaatgacaaagatagatccctggttgaggaactttttgcaaacaacaagattcag
gtattggtttgtactagcacattggcatggggtgtaaaccttccagcgcatctggtaatt
ataaagggaacagaattttatgatgggaaaacaaagagatatgtcgacttcccaatcaca
gatatcttgcaaatgatgggtcgtgcaggtcgcccacaatttgatcaacatgggaaagct
gtcattcttgttcatgaacccaaaaagagcttctataaaaagtttttatatgaaccattt
cctgttgagagtagtctgagggaacagctgcataatcacatcaatgcagagatagtttct
ggcacaatttgccataaagaggatgcattgcattatctttcatggacatatttattccgc
agactgatgtttaatccggcttactatggcttggacaatactgacactgaagttctgagt
tcttatttgtctaggttggtgcagaacacattggaggatcttgaagacagtggatgcatc
aagatgaatgaggatagtgtggagccaatgatgctgggttccatagcatcccagtattac
cttagctacatgaccgtatcaatgtttggttcaaacattagctctgatacctcgcttgaa
gtattcttgcatattctatctgctgcttctgaatatgatgaacttcctgttcgccacaac
gaggaaaattacaatcaggcactgtcagagagagttcgatataaagtggacaaggatcgc
ctagatgatccacatgtcaaagcaaatctgctgtttcaggcacatttctctcagttagaa
ttaccaattagtgactatgtcacagacttgaagtcagttttggatcaaagtattcggatt
atccaggctatgatagatatatgtgccaacagcgggtggctttcaagttcagttacttgc
atgcatcttttgcagatggtcatgcagggcttatggtttgatgaggatgcttctttatgg
atgttgccttgcatgaatgttgaacttgccgactcactctgcaaacgaggaatatttcgt
atacagcagctattggaccttcccaaggcaactgtgcaaaacatgattggaaacttccct
gcttcaaaattctttcaggatctgcagctttttccacgcatcgaagtcaagttgaaaatc
ctgcggaaagatggtggaaaatcttgctctttaaacatcagattggtgaagaccaatttc
aggaaaaataaatcaagagcttttactccacggttccctaaggtgaaaaatgaagcatgg
tggctggtactggggaacacttcaacgttggaattatatgctctgaagagagtatctttc
tctgatcacttggttactaacatggagttgccatcagattcaaccaccttccaggggatg
aaactgatgttaatatcagattcttatctggggttagaacaagagcgttcagtatcacaa
ctttatgaagggcagtaa
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integrated database retrieval system
