Argentina anserina (silverweed cinquefoil): 126796645
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Entry
126796645 CDS
T10558
Name
(RefSeq) regulator of nonsense transcripts UPF2
KO
K14327
regulator of nonsense transcripts 2
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans03013
Nucleocytoplasmic transport
aans03015
mRNA surveillance pathway
Brite
Messenger RNA biogenesis [BR:
aans03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
126796645
mRNA cycle factors
P-body specific factors
126796645
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
126796645
NCBI-ProteinID:
XP_050379329
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Position
6:complement(16060296..16072176)
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AA seq
1196 aa
AA seq
DB search
MSVKTSSEMDHNEEEAGGGAGAEPHGKQDDEEAVARLEEMKKSIESKMALRQSNLNPERP
DPGFLRTLDSSIKRNTAVIKKLKQINEEQREGLMDDLRSVNLSKFVSEAVTAICEAKLRS
SDIQAAVQICSLLHQRYKDFSPTLVQGLLKVFFPGKSGDDPDADKNLRAMKKRSTLKLLL
ELYFVGVIEDGAIFVNIIKDLTSGEHLKDRETTQTNLTLLASFARQGRMFLCLPLSGPEI
YAEFFKGLNITPDQKKFFKKAFQTYYEVAAELLQAEHTSLRQMEHENARILNAKGELSDE
SASSYEKLRKSYDHLYRNVTALAEALDMQPPVMPEDGHTTRVTSGDDASSPAVGKDSSTL
EAIWDDEDTRAFYECLPDLRAFVPAVLLGEAESKVNEQSAKTQEQPTEPAAESDQSQQAT
EEAAESSLAVGASQEGKIREKGKEKEEKDKIKEAEKEKGDRKGENEKEKLKSIEGTNLDA
LLQRLPGCVSRDLIDQLTVEFCYLNSKANRKKLVRAVFNVPRTSLELLPYYSRMVATLST
CMKDVSSMLLAMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFRIVPAGLVFSCLKAC
LDDFSHHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLVENA
YYLCKPPERSARVAKVRPPLHQYIRKLLFSDLDKSTLEHVLRQLRKLPWGECEPYLLKCF
MKVHKGKYGQIHLIASLTAGLSRYHDEFAVSVVDEVLEEIRLGLEVNEYGMQQRRIAHMR
FLGELYNYEHVDSSVIFETLYLILIFGHGTTEQDVLDPPEDCFRMRMVITLLETCGHYFD
RGSSKRKLDRFLMHFQRYILSKGLLPLDVEFDLQDLFAELRPNMTRYSSLEEVNAALVEL
EEHERTVSTDKANNEKHSDTEKSARRNTSSKTTVNGQSAVNGMDENDGVHEDHRDSDSDS
GSGTVDPDRHEEELDEENHDDGSESDEDDDDDGGGPASDEEDEVHVRQKVAEVDPQVEAD
FELDLKAVMQESMEQRRQELRGRPTLNMMIPMNLFEGSTRDHHGRIGGDSGDEGDEKSGG
SKEVQVKVLVKRGNKQQTKQMSIPRDCSLIQSTKQKEAAELEEKQDIKRLVLEYNDREEE
ELNGLGSQTLNYAQSGGTRFSGRGSTWEGTSGRGGGPRRYHSSYSGAGIYYNSRRK
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgaagacaagtagcgagatggatcacaatgaggaggaagccggcggtggcgcc
ggggctgaacctcatgggaagcaagatgatgaggaagctgttgctcggcttgaggaaatg
aagaaatctattgagtcgaagatggctcttcgtcagagcaatttgaaccctgagaggcct
gacccgggatttctgaggacactggattccagtattaaacgcaacacagcggttattaaa
aaactaaagcagataaatgaggagcagcgagaagggctgatggatgacttgaggagtgtt
aacctcagtaaatttgttagtgaagctgttactgctatttgtgaggccaaacttagatcg
tcggacatacaagcagcagttcagatctgctctctgcttcatcaaagatacaaagacttc
tccccaaccctcgttcaaggtcttttgaaagtgttctttccgggaaagtctggggatgac
ccggatgcagataagaacctgagggccatgaagaagcgtagcactttgaaactccttttg
gaactttactttgttggagttatagaagatggtgctatttttgtgaatattattaaagat
cttaccagtggagaacacttaaaggaccgggaaactactcagacaaatttgactcttctt
gctagttttgctcggcagggaagaatgttcctttgtcttccactctctgggccagaaata
tatgcagagttttttaagggccttaatatcacacctgatcaaaagaagttctttaagaag
gcatttcaaacatattacgaagttgcagcagaactgcttcaggctgagcatacttcactt
cgccaaatggagcatgagaatgcaagaatccttaatgcaaaaggagagctcagtgatgaa
agtgcctcttcatatgaaaagctgcgcaaatcttatgaccatttgtaccgcaatgtcaca
gcattagcagaagcacttgatatgcaacctccagtaatgccagaggatggtcacacaact
agggttactagcggagatgatgcttcatctccagctgttggaaaggattcttccacactt
gaagccatatgggacgatgaagatactagggctttctatgaatgtttgccagatcttagg
gcatttgttccagctgtgttacttggagaagcggagtcaaaagtcaatgagcaatctgca
aagacccaagagcaaccaactgaacctgcggctgaatcagaccagagtcaacaggctaca
gaagaagctgcagaatcttctttggcagttggtgcttcacaagaaggaaaaatcagagag
aaaggaaaggagaaggaagagaaagacaagatcaaagaggcggagaaagaaaaaggtgac
aggaagggagaaaatgagaaggagaaactgaaaagtattgaaggaacaaatttggacgct
ttactgcagaggcttcctggttgtgtgagccgtgatctcattgaccaattgactgtagag
ttttgttatctaaattctaaagcaaatcggaaaaagcttgtgagggcagtgtttaatgtc
cccaggacatcattggagctactgccgtactactcacgcatggttgccactctgtcgact
tgtatgaaggatgtatcatctatgcttcttgctatgttggaggaggagttcaatttctta
ataaataaaaaggatcaaatgaatattgaaacgaagattaggaatattagatttatcggg
gaactctgtaagttcagaattgtaccagctggtcttgtgtttagttgtttaaaggcttgt
ctagatgatttctctcatcataatattgatgttgcttgcaatcttcttgagacctgtggg
cgtttcctgtatcggtctcctgaaactactgtgcggatggctaacatgttggaaatatta
atgcgcttaaagaatgtgaaaaatttggatcctcggcacagcacccttgttgaaaatgct
tactacctgtgcaaaccacctgagaggtccgcacgagtcgctaaagtccgtcctccattg
catcagtatataagaaagctgctattctcagatcttgataaatctacccttgagcatgtg
ctgaggcaactgcgcaaactaccgtggggtgaatgtgagccatatcttctgaaatgtttt
atgaaggttcacaaagggaagtatggtcagatccatttgattgcatctctcactgctggc
ctgagtcggtatcatgatgaatttgctgtctctgttgttgatgaggttttagaggagatc
aggcttggcctagaagtaaatgagtacggaatgcagcaaagacgaattgcccatatgcga
ttcctaggagaactatacaactatgaacatgtcgattcttctgttatatttgagactcta
tacttgattctcatctttggccatggcacaacagagcaagatgtactggatccaccagaa
gattgttttcgcatgaggatggttattacgcttcttgaaacttgtggacattactttgac
cgaggctcttcgaagaggaaacttgatcggttcttgatgcactttcagagatatatacta
agcaaaggtctactaccactagatgttgagtttgatctacaggacttatttgcagaattg
cgacccaacatgactcgatactcatcccttgaagaagttaatgcagctctggtagaactt
gaggagcatgagcgtactgtctccaccgacaaggccaataatgagaagcactcagacact
gaaaagtctgctaggaggaatacctccagtaaaacaacagtgaatggacagagtgctgtc
aatggtatggatgaaaatgatggggtgcatgaagaccatagagatagcgacagtgattcg
ggaagtggcactgttgatcctgacagacatgaagaagaattggatgaagagaatcatgat
gatggatcagagagtgacgaggatgatgatgatgatgggggtggacctgcttcggatgag
gaggatgaagtccatgtcagacagaaggttgcagaggttgatcctcaggtagaagcagat
tttgagctggatctcaaggctgttatgcaggaaagcatggagcaacgaagacaagagctg
cgaggtcggcctacgttgaatatgatgataccaatgaatttgtttgaggggtccaccagg
gatcatcatggacgcatcggaggggacagtggtgatgagggagatgaaaagtctggagga
agcaaggaggtccaagtcaaagttcttgtgaagcgtggtaacaagcaacagacaaagcag
atgtccatccctcgggactgctcccttattcagagcacgaaacagaaagaagcagcagag
cttgaagagaaacaagacatcaagaggctggtgttggaatataatgatagagaagaggag
gaactcaatggattaggttcccagactttgaactatgcacagagtgggggcactagattt
tccggtcgtggcagcacttgggaaggaactagtggcagaggcggtggaccacgtcgatat
catagtagttattccggtgccggaatttattacaacagcaggagaaagtga
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integrated database retrieval system
