Argentina anserina (silverweed cinquefoil): 126796826
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Entry
126796826 CDS
T10558
Name
(RefSeq) probable pectate lyase 12
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans00040
Pentose and glucuronate interconversions
aans01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
126796826
Enzymes [BR:
aans01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
126796826
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
126796826
NCBI-ProteinID:
XP_050379509
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Position
6:complement(9569439..9572714)
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AA seq
483 aa
AA seq
DB search
MLTRTCIVLISLLASFSLAKAYLNLTLPGQHPNPEEVVQEVYRRVNASVVRRKTLQVNQR
DQFSSCLTGNPIDDCWKCDPDWPNYRQRLADCAIGFGQYALGGKGGEYYIVTDSSDDDAV
NPKPGTLRYAVIQPEPLWIVFPSNMLIKLSQELIFNSYKTLDGRGANVHITGGGCITLQY
ISNVIIHNVHIHHCVPSGNTNVRSSPTHYGYRTKSDGDGISIFGSKDIWVDHCSLSHCKD
GLVDAVMGSTGITISNNYFSNHNEVMLLGHSDGYLPDSGMQVTIAFNHFGENLVQRMPRC
RRGYIHVVNNDFTAWEMYAIGGSGNPTINSQGNRYTAPTNRNAKEVTKRVDTGEGLWRGW
NWRSEGDIMVNGAFFVASGAGVEIKYEKAYSVEPKSVVLIDQLVMHAGALGVGGRDNNLG
KWNTGPNQGFDSGLDYEDEMSGSSTNMPRQPLSSTSSLFYFLVPFSCLLFLYIPDWHLIT
MRN
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgctaaccagaacctgcattgtcctcatctctcttctcgcttcattctcccttgctaaa
gcttacctcaacctcactcttccaggccaacatcccaacccagaggaagttgttcaagaa
gtttataggagggtaaatgcttccgtagtaagaaggaaaacgctgcaagtgaaccagaga
gaccagttctcgtcatgcctaacaggaaaccctatagacgattgctggaaatgcgacccg
gactggcccaattaccgtcaacgcctagccgactgcgcaatcgggtttggtcagtatgct
cttggaggcaaaggtggggagtactacattgttactgactcgtccgacgatgatgccgtg
aacccgaagccggggactttaagatatgccgtgattcagccggaaccattgtggattgtg
ttccctagcaacatgctcatcaagctttctcaggagctcatctttaatagctacaaaact
cttgatgggcgaggagctaatgttcacataacgggcgggggatgcattactttgcagtat
attagcaatgtcatcatccacaatgtgcatattcaccattgtgttccttcagggaatact
aatgtgcgatcaagcccaacccactacggctaccgcacgaagtcggacggcgatggcatt
tccatcttcgggtccaaagacatttgggtcgatcactgcagcctgtcacactgcaaggac
ggtctcgtcgacgccgtgatggggtccacaggcatcactatctcaaataactacttctcc
aaccacaacgaggtaatgctactcggccacagcgacggttacttgccggactccggcatg
caggtgaccatagccttcaaccacttcggggagaatctagtgcagcgcatgccccggtgt
agacgcggctacatccacgtagtgaacaatgacttcactgcatgggagatgtacgcgatc
ggcgggagcgggaaccccacgatcaatagccaggggaacaggtacacggcgccgacgaat
aggaacgcaaaggaggtgacgaagcgcgtggacacgggggaggggctgtggagggggtgg
aactggcggtcggagggggacataatggtgaatggagccttctttgtggcgtccggcgcc
ggagtggagattaagtacgagaaggcttacagtgtggagcctaagtcagtggtgctgatt
gaccaattggtcatgcatgctggtgctcttggtgttggtggcagggacaacaatctgggg
aagtggaacacaggacccaaccaaggtttcgattcaggcctcgattatgaggatgagatg
tctggaagcagcaccaacatgccaaggcaaccactttcatccacctcgagtctcttttac
tttttagtcccattctcatgcttgttgtttttgtatatccctgactggcatttgatcaca
atgagaaattga
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