Argentina anserina (silverweed cinquefoil): 126797514
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Entry
126797514 CDS
T10558
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126797514
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aans03041
]
126797514
03009 Ribosome biogenesis [BR:
aans03009
]
126797514
Enzymes [BR:
aans01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126797514
Spliceosome [BR:
aans03041
]
Complex A
U1 snRNP components
U1 related factors
126797514
Complex B
126797514
Ribosome biogenesis [BR:
aans03009
]
Eukaryotic type
Pre-60S particles
Helicases
126797514
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
126797514
NCBI-ProteinID:
XP_050380101
LinkDB
All DBs
Position
6:complement(25947366..25954613)
Genome browser
AA seq
499 aa
AA seq
DB search
MSRYDNRSGDPTSYRDRRSDLGYGGAARSSSSRKDYDGAESPRKLDLDGLTPFEKNFYVE
SPEVEGMTEREVEEYRKRREITVEGRDVPKPIKSFRDIGFPEYVLQEITRAGFVEPTPIQ
AQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAI
QIQDQSTKFGASSKLKSTCIYGGVPKGPQIRDLQKGVEIVIATPGRLIDMLESHTTNLRR
VTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLASKFLYNAYKVI
IGSPDLKANHSIHQIVDIITENQKYNKLVKLLEDIMDGSRILVFMDTKKGCDQITRQLRM
DGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLE
DYVHRIGRTGRAGAKGTAYTFFTAANARFAKELISLLEEAGQKISPDLAAMGRGAPPPPS
GHGGFRDRSKGYGGNRPWS
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgagccgctacgacaaccgctccggcgaccccacctcctaccgtgaccggcgaagtgat
ttgggctacggtggggcggccaggtcatcgtctagtaggaaggattatgatggggccgag
tcgccgaggaagttggatctggatggcttgacgcctttcgagaagaatttctatgttgag
tcacctgaagtggaaggaatgacagagagggaggttgaggagtataggaaacggagggaa
attactgttgaaggccgcgatgttcctaagcccatcaagagctttcgtgacattgggttt
ccggagtatgtcttgcaagaaatcacaagagctggatttgttgaacctaccccaattcaa
gctcaaggatggccaatggctttgaaggggcgtgatcttattggtattgctgaaacagga
tcaggaaagacattggcttacctgttgcctgcaattgtacatgtcaacgctcagccaatt
ttatctcccggagatggtccaatagtattagttttagctcctacccgtgaactggccatt
caaatccaagatcagtctactaaatttggcgcatcttcaaaacttaaaagcacatgcatc
tatggtggagttcccaagggacctcaaattcgtgatctgcagaaaggagttgagatagta
attgctaccccgggaaggttgattgatatgttagagtcgcatactacaaacctacgaagg
gtcacatatcttgtgttggacgaggctgatcggatgcttgatatggggtttgagcctcag
atacggaagattgtttctcagattcgcccagaccgtcagacattatactggagtgcgacc
tggcctaaggaagttgaacagctggcgagcaagttcctttacaatgcatacaaagtaata
ataggttctccagatttgaaagccaaccattcaattcaccagattgttgacatcattact
gaaaatcagaaatataacaaattggtaaagttgctggaggatatcatggatggcagcaga
atactggttttcatggatactaagaaaggttgcgatcagatcactcggcagcttcgaatg
gatggttggcccgccctctccattcatggagacaaaagtcaagcagaaagggattgggtc
ctctctgagtttaaagctggcaaaagccccataatgactgcaactgatgtcgccgctcgt
ggtttagatgttaaggatgtgaaatatgtaattaattacgactttccgggatcccttgag
gactatgtccatcgcattggccgaactggaagagctggggctaaaggaacagcgtacaca
ttctttacagctgccaatgctagattcgcaaaggaactgattagcttactcgaagaagct
ggacagaagattagtcctgatttggcagcaatgggccgtggtgctcctcctcccccttca
ggccatgggggttttcgagaccgcagtaaggggtatggtggcaatcgtccctggagttga
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