Argentina anserina (silverweed cinquefoil): 126797703
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Entry
126797703 CDS
T10558
Name
(RefSeq) polyadenylation and cleavage factor homolog 4
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans03015
mRNA surveillance pathway
Brite
Transcription machinery [BR:
aans03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
126797703
Messenger RNA biogenesis [BR:
aans03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
126797703
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
126797703
NCBI-ProteinID:
XP_050380359
LinkDB
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Position
6:10535940..10542517
Genome browser
AA seq
1073 aa
AA seq
DB search
MDMESSRRPFNRSNEPGLKKPRLNDDQGVGNPNLNGRGFGQRPGGANPALSRFRVSDREL
ERDGGGAYVPQPLQHQELVSQYRTALAELTFNSKPIITNLTIIAGESLNAAKAITATICA
NIIEVPSEQKLPSLYLLDSIVKNIGRDYIKYFAARLPEVFCKAYRQVEPPIHQSMRHLFG
TWKGVFPAQTLQMIEKELGFTTAANGSSSGVSTSRPDSQSQRPAHSIHVNPKYLERQRLQ
HPPRTKGMANDFDGTMANSIDDVERLDRVAGISAGRVWVDPPVKMPIIQRSTRDALSERF
HEKNIGAEYDESDYDSDLPRRSNLGIGRSGGNIIQQGHDKPWYGGVSSAAETISIQRNGF
NKKHGLNYSAPKSANADPRLQTPQVIASRNRGGLSSSWKNSEEEEYMWDDINSRLTDRVT
PDLSSNIRKGHWISDDSEKLDFGGGSRKVSRVNDMEVATDSVEQKDLSALGRRMPSPWSL
QESNVVERLTSSGAPVMSSAHSERYVSGLSGLSTSGDSSVASRAQMISSRIGASSFGLPT
NAASGSNGAVVKQKQIPLVRAASKIQHPRHYMAEQDPVQVPSLPPDLKASQILAKSELGS
HGQYTEDSLPVPTSNVRISGMTKSQPQDLKALSSSMAAIQSRHQYPFQQQDSAEPESLEQ
TQKPHVMPSTVRNSISDLSNLLAPETSGQSSTSSLLAAVLKTGILSNKSFTGSLPNLNLG
DKEKLPPQSSGQPPLPIGRPPTKAAVPGLKVAPAPSLGHLSGDNSPTTSSTLQKVGHLSP
PPGQLPLSQERSSTEKDSNAKDPISNLLSSLVAKGLISASKSESPTFLPSQKLVEGQSQN
LPMIGTSSISPVSESSKVAVSSQRDDAPLTEQVAKPPAASAQSTKTEKRNLIGYDFKPDK
IRELHPFVIDELFDDLPHKCSLCGLRLKLKERLDSHLEWHASKTPEADGSKASRGWYANS
INWVGGKAGNSSELVIDSNDMTVVSNEPIILADESQCACLLCGNTFEDFYCQESDEWMFK
GAVYMTVPAGDGELGTAGGSILKGPIVHASCIDENSLEDLGLAATRIKLESDV
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atggacatggagagctcgcgcaggccgttcaacagatcgaacgaaccaggcttgaagaag
ccccgattgaacgacgaccaaggcgtcgggaatccgaatctgaacggccgaggcttcgga
caaaggcccggcggagctaatccggcgctgtcgaggttcagagtgagtgatagagagctg
gagagggacggcggcggagcctatgtgccgcagccattgcagcaccaggagcttgtgagc
cagtaccggacggcgcttgcggagctgacgttcaattcgaagccgatcattacgaatttg
accatcattgctggggagagccttaatgcggctaaggctatcactgcgacgatttgcgcc
aacattattgaggttcctagcgagcagaagttgccatcgctttatcttctggacagtatt
gtaaagaatattggaagagattacataaaatactttgctgccagattacctgaggtattc
tgcaaggcatatagacaggttgaacctcctatacatcaaagcatgcgtcatctttttgga
acttggaaaggtgtcttccctgctcagacacttcagatgattgagaaagaacttgggttt
actactgcagcaaatggttcgtcgtctggagtttcaacatctagaccagactcacagtcg
caacgtccagcacatagcattcacgtaaaccccaaatacttggaaagacagcgtcttcag
catccaccgaggacaaaagggatggctaatgactttgatgggactatggcaaactcaatt
gatgatgtagagaggttggacagagtagctggtatcagtgctggacgagtatgggttgat
cctccagttaaaatgccgattattcaacgttcaaccagggatgcactaagtgagcgtttt
catgagaagaatattggtgccgaatatgatgaatctgattatgattctgatcttcctagg
aggtcaaacttaggcattgggcgatctggtgggaatattatccagcaaggacatgataaa
ccttggtatggaggtgtcagcagtgctgccgaaacaatttccatccaaaggaatggtttt
aacaagaagcacggattaaattactctgcacctaaatctgcaaatgctgatcctcgtctt
cagacaccacaagtcattgcaagtaggaataggggtgggttgtcgagtagttggaagaat
tctgaggaagaggaatacatgtgggatgatataaactcaagattaacagatcgtgtaact
cctgatctttctagtaacataagaaaagggcactggatttctgatgattctgagaaattg
gactttggaggtggctctcgtaaggtgagcagagtaaatgatatggaggtggccactgat
agtgttgaacagaaagacttatctgctcttgggcgccgtatgccatcaccttggtcattg
caagagtcaaatgttgtggaacggctgacctcttccggtgccccggtcatgagttccgct
cattcagagcgttatgtatcaggtttaagtgggttatcaacaagtggagattcttctgtg
gcgagtagagcacagatgatttcttctcgtattggggcctcaagctttgggttgccgaca
aatgctgcatcagggtctaatggtgctgtagtgaaacagaagcagattccattggtcaga
gctgcatcaaaaatacagcatcctcgtcattatatggctgagcaagacccggttcaggtg
ccatcccttcctcctgacttgaaagcatctcaaattttggcaaagtcggagttaggatca
catggtcagtataccgaggactctttgcctgttccaacttccaatgttcgaattagtggc
atgacaaaatcacagccccaagatttgaaggctttgtcttcgtcaatggctgccatccaa
tcaaggcaccagtatcctttccaacaacaagacagtgcagagcctgaatccttggaacag
acacagaagccccatgtaatgccctcaacagtcagaaattctatatcagatctttctaat
ctccttgctccagaaacgtcaggacagtctagcacaagtagtttgttggctgctgttttg
aagactggaattctttctaataaatcattcactggtagccttcctaatttgaatctaggt
gacaaggaaaaactgccaccacagtcgagcggtcaaccccccttgccaattggacgacca
cctaccaaagctgcagttccggggttaaaggttgcaccggcaccttcattaggccatctt
tccggtgataactcaccaaccacctcaagcactctgcagaaggttggacatctatctcct
ccacctggccaactgcctttgtcccaagagcgtagctcaacagaaaaagattcaaatgcc
aaggatccaatatcaaaccttttgagctctttggttgccaaagggttgatatctgcatca
aagtcagagtcaccgacatttctgccatctcaaaagctggtagaagggcaaagtcagaac
ttacctatgattggcaccagctccatctctccagtttcagaatcttcaaaagttgctgtt
tcatctcaaagggatgatgcacctctcacagaacaggtggctaaaccgcctgctgcctcg
gcccaatctactaagaccgaaaaaaggaatctaataggatatgacttcaagccagataaa
atccgagaactacatccatttgtcattgatgagctttttgatgaccttccacataaatgt
agcctatgtggccttaggctcaaacttaaagaacgtcttgatagtcacttggaatggcat
gcttcgaaaactcctgaagcagatggttcaaaggcatcaagggggtggtatgcgaattca
atcaactgggttggtgggaaggcaggaaactcttctgaacttgtcatcgattcaaatgac
atgactgtggtcagtaatgagcccataattctggctgatgaaagccaatgcgcatgtctt
ctatgtggcaatacttttgaagacttctattgtcaagaaagtgatgaatggatgtttaaa
ggagccgtgtatatgactgttccagctggggatggtgagcttggaactgcaggtgggagc
attctgaagggtcccattgtgcatgcaagttgtattgatgaaaattcacttgaggatttg
ggactggctgctacacgaattaaattggaaagtgatgtttag
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integrated database retrieval system
