Argentina anserina (silverweed cinquefoil): 126797830
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Entry
126797830 CDS
T10558
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
126797830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aans03019
]
126797830
03009 Ribosome biogenesis [BR:
aans03009
]
126797830
04131 Membrane trafficking [BR:
aans04131
]
126797830
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aans04147
]
126797830
Messenger RNA biogenesis [BR:
aans03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
126797830
Ribosome biogenesis [BR:
aans03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
126797830
Membrane trafficking [BR:
aans04131
]
SNARE
SNARE associated proteins
Others
126797830
Autophagy
Aggrephagy
Other aggrephagy associated proteins
126797830
Exosome [BR:
aans04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
126797830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
AAA_33
AAA_5
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
AAA_17
nSTAND3
Mg_chelatase
AAA_28
AAA_18
Parvo_NS1
ATPase_2
Vps4_C
AAA_lid_PRS2_C
IstB_IS21
ABC_tran
Viral_helicase1
AAA_7
NB-ARC
AAA_24
TsaE
NACHT
Zeta_toxin
DUF815
Zot
Motif
Other DBs
NCBI-GeneID:
126797830
NCBI-ProteinID:
XP_050380516
LinkDB
All DBs
Position
6:complement(9162202..9166659)
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AA seq
808 aa
AA seq
DB search
MTDKAGSSSDPKGTKRDFSTAILERKKAANRLVVDEAINDDNSVVALHPETMEKLQLFRG
DTILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRV
HILPIDDTIEGVTGSLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPSEYC
VVAPDTEIFCEGEPVRREDEDRLDEIGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGV
KPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEK
NAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDP
ALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLEKIGKETHGYVGADLAALC
TEAALQCIREKMDVIDLEDEEIDAEILNSMAVTNEHFSTALGTSNPSALRETVVEVPNVS
WDAIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANEC
QANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRGSSSGDAGG
AADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQ
IFKAALRKSPVSKDVDLSALAKYTQGFSGADITEICQRAVKYAIRENIEKDIERERRRSE
NPEAMEEDVEDEVPEIRAAHFEESMKFARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFP
ESGSAAAATGSDPFATSGAGADEDDLYN
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataaagctggatcatcctccgaccctaaggggactaagagagatttcagcact
gcgattctcgagcggaagaaggcggcgaatcgcctcgtcgtcgatgaggccatcaacgat
gacaactccgtcgtcgcgcttcacccagagaccatggagaagctccagctcttcaggggc
gacactattctcatcaagggaaagaaaagaaaggatactatctgcattgcccttgctgac
gatacttgtgacgaaccaaagattaggatgaacaaggttgtgaggagcaacctgagggtt
aggcttggggatgttgtttctgtacaccagtgtgctgatgtcaagtacggaaagcgtgtg
cacattctccctattgatgacactattgaaggtgttactggaagtttgtttgacgcttac
ttgaaaccttatttcctggaggcctaccgcccggtgaggaagggagatctcttcctggtg
agaggaggaatgaggagtgtagagttcaaggttattgagactgatccttctgagtactgt
gttgttgctccagacactgaaatcttctgcgagggggagcctgtaagacgggaggacgag
gatagattagatgagattggttatgatgatgttggtggagttaggaagcagatggctcag
attcgtgaattagtggagctgccattgaggcatcctcagctttttaagtcaattggtgtg
aagcccccgaagggtattcttttgtatgggccacctggatctggtaagacactaattgcc
agagctgtcgcaaatgaaaccggggctttctttttctgcatcaatgggcctgaaatcatg
tcaaaattggctggggagagtgaaagcaacctcaggaaagcttttgaggaagcagaaaag
aatgcgccttcaataatctttattgatgagattgattcgattgctcccaagagagagaag
acacatggagaagttgagaggagaattgtatcccagctcttgacactgatggatggactt
aaatctcgtgcccatgtaattgttatgggggctacgaatcgtccaaacagcattgacccc
gctctcagaaggtttggtagattcgatagggagatagatattggtgtcccagatgaagtt
gggcgtctcgaggttcttcgtattcatacaaagaacatgaagcttgctgaagatgttgat
ctggaaaagatcggcaaggagacacatggttatgttggtgctgatcttgctgccctatgt
actgaggctgcccttcagtgcatcagagagaagatggatgtcattgacttggaagatgag
gagatagatgctgagatactcaactcaatggcagttacaaatgaacacttctccactgct
ctcggaacaagtaacccatctgctctccgtgaaacggttgttgaagtgcccaatgtatct
tgggatgctattggaggtcttgagaatgttaagagagaacttcaagagacggttcaatat
ccggttgagcatcctgagaaatttgagaaatttgggatgtcaccgtcaaagggagttcta
ttctatggccctcctgggtgtggtaaaactcttcttgccaaggccattgccaatgagtgc
caggctaactttatcagtatcaagggacctgaattgcttactatgtggtttggagagagt
gaggccaatgtgcgggaaatctttgacaaggctcgcggatctgctccatgtgtcctattt
tttgacgaacttgattccattgctactcagagaggtagcagttcaggtgatgctggaggt
gctgcagatagagttttgaaccaactccttacagagatggatggaatgtccgcaaagaag
actgttttcataattggtgccactaacagacctgacattatagaccctgcacttctacgt
ccgggccgtctggatcaattgatatatatccctctccctgatgaggaatcccgtcttcaa
attttcaaggcagccttgaggaagtctccagtttctaaagatgtggatcttagtgccctt
gccaagtatacccaaggattcagtggtgctgatatcactgaaatttgccagcgtgctgtc
aaatatgccatcagagagaatattgagaaggatattgaaagggagaggaggagaagtgag
aatcctgaggctatggaggaagatgtagaggatgaagtacctgaaatcagggcagctcac
tttgaggaatcaatgaagtttgctcgtcgcagtgttagtgatgctgatatccgcaaatac
caagcatttgctcagacattgcagcagtcgagaggatttggaaccgagtttaggttccca
gaaagtggttctgctgcagctgctactggatctgacccttttgcaactagtggtgccggg
gctgatgaagatgacctttacaattag
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