Argentina anserina (silverweed cinquefoil): 126798061
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Entry
126798061 CDS
T10558
Name
(RefSeq) DNA-directed RNA polymerase I subunit 1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
126798061
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aans03021
]
126798061
Enzymes [BR:
aans01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
126798061
Transcription machinery [BR:
aans03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
126798061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
126798061
NCBI-ProteinID:
XP_050380843
LinkDB
All DBs
Position
6:complement(15177110..15194791)
Genome browser
AA seq
1653 aa
AA seq
DB search
MASAQALEVATESVTSVTFRFYTNEEAQRLSVVKVTKGDLVDELGTPVPGGLYDPAMGPL
DDRGNERCKTCGDSSFTCRGHFGHIDIVLLVYNPLLFNVLYKLLQRTCLNCYCFRTSKEL
VEKYVSKLELVMKGDVVGAKRLDSDTPNEYSYLEEDVKGNNIEREGNSKQERWTSLQFTE
AMSILEDSLDTKQKCNNCKFKNPKIIKPTFGWLQMNGANNARENVIRGLVGSLSVQEEGE
SCGDDVDAGKSDMSYASSLVTQDTATKKSKGQEGKVLNEFFKQKKKFSGDLLPIEVKDIM
RRLWKNEAGLCSFLSDIQCQGFERKEGYSMFFLETVLVPPIKFRPAAHSGDSVMEHPQTV
SLSKVIEKNTYLKDALGNDNLSQTILRWRQLQDCINIMFDSKTVAGQGKTDASGICQLLE
KKEGVFRQKMMGKRVNHACRSVISPDPYLAVNEIGVPPIFAKTLTYPEGVTPWNVFKMRN
AIVNGSEIHPGATHYIDKASKKLPQQREDRVKLSRKLPSSEGAGTQHRKGSEYENKVVRR
HMEDGDVVLVNRQPTLHKPSIMAHIVRVLPGEKTLRMHYANCSTYNADFDGDEMNVHLPQ
DEISRAEAYNLVNANNQYVKPTSGDPIRALIQDHVISAVLLTKKDTFLHSDEYNQLLYSS
SVSACGLDTFSGKPGQKVLSSNSEGAMQALLPAIWKPVRLWTGKQVISTLLNHITSGSPP
LTVEKEAKLPSGFFNCKTLEEEDKSDKGRRTKEKKSRKEEAGNDDLKEREEPDESKLLIY
RNILVRGVIDKNQFGDYGLVHNVQEFYGSEAAGKLLSVFSRLYTVYLQMHGFTCGVDDLL
LIQSKDEKMKEQLESCEELGEKVFREFIGARQSKRKDPLILRSDIEEFLRNNGESVSEML
DRKMTSELNKKISKSDVFKQLFKKGLSKPSVKNYMYLMTSSGAKGGVANLQQIASYLGQQ
ELEGKRVPQMVSGKTLPCFPPWDWSPRAGGFIIDRFLTGLHPQEYYFHCMAGREGLVDTA
VKTSRSGYLQRCLIKNLECLKVSYDYTVRDADGSIVQFRYGEDGIDVHLTSFIKKFEKLA
NNKEMFDERVGHQIGEYPFIEELPPAYKKRAGLNIKLMEHKYLSSLAQPGEPVGVLAGQS
VGEPSTQMTLNTFHNAGRSEMNVTLGIPRLQEILMTASSDIKTPVMTCPLIKEKAEDAKS
IADRLKRITVADIIESMKVNITPFTHQDHKACRIYKLEMILYIPQHLSKFSEDWEELLEV
KFVRALEDAIQNHLVLLSKISGIKDIKADSLPKASNETDEDVSCNISQHEAGDDDDGDVD
DSGEGAEDFGLDAHKQKRQGTDEMEYEDDCEEEVTEAHYPDGESEIDKGDSDVEVDNDGV
SGISDANDEMDERPLTGDTSKPHSKGKKTESRDKIKKKARAKLVRKEYDRATFVSAKGFH
FEIHFKFTNEPHILLDQIARKTSRNVCVKSSGKILDCKDIDIYGNEDQVYCSWEDPKNPT
EEEKKMRALQTAGVDFPTLWKLHDYLDVNYIYSNNIHAMLTTYGVEAARETIIKEISNVF
KVYGISVNIRHLSLIADYMTYSGGYRPMNRFGGIAESISPINKMSFETASKFIREAAYHG
ETDDLETPSARICLGLPVKVGTGSFDVMQKIEI
NT seq
4962 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagctcaagccttagaggttgctacggagtcggtgacgtcagtcacgttcagg
ttctataccaacgaagaggctcagaggctgagcgttgtcaaggttaccaaaggggatttg
gtcgacgaattgggaacgccggtgcccggcggcctttacgatccggcaatgggccctctc
gacgacagaggcaacgaacggtgcaaaacatgtggtgatagttcgtttacctgccggggt
cattttggtcacattgacattgttttgcttgtctataatcccttgttgttcaatgttctt
tacaaacttctacaaagaacctgcctaaattgttactgtttccgaacaagtaaagagctg
gttgaaaaatatgtttccaaactggaactcgtgatgaaaggtgacgttgttggagcgaaa
agattagactctgacacacctaatgaatactcatatcttgaggaggacgtcaaaggaaat
aatattgagagagaggggaattcaaagcaggaaagatggacatctcttcagttcacagag
gcgatgtctattttggaagattctttggatacaaaacaaaaatgcaacaattgcaaattt
aaaaatcctaaaatcattaaaccgacttttggttggttacagatgaatggagccaacaat
gctagagaaaatgttatcagaggtctggtaggttccttaagtgttcaagaagaaggtgaa
tcttgtggtgacgatgttgatgcaggcaaatctgatatgtcctatgcatcctctcttgtg
actcaagatactgcaacgaagaagagtaaaggacaagagggcaaagtgctcaatgagttc
tttaagcagaaaaagaagttctccggagatcttttaccaattgaggttaaagatataatg
aggcgtttgtggaaaaatgaggccggactctgctcttttctcagtgatattcagtgccaa
ggctttgaaagaaaagaaggttactctatgtttttcttagagactgttcttgtaccacca
atcaaatttcgtcctgcagcccatagtggtgattctgtgatggagcaccctcaaacagtt
tcgttgagtaaggtaatcgagaaaaatacatacttgaaagatgctcttggtaatgacaac
ctgtcacagacaattctccgttggagacaacttcaagattgtataaatataatgttcgat
agcaaaactgttgcaggtcaaggtaaaacagatgcttctggaatatgccagttgctggag
aagaaggaaggcgtgttccgccagaaaatgatgggaaagagggtcaatcatgcatgccga
tctgttatttccccagacccctatttagctgttaatgagattggagttcctccaatcttt
gcaaaaacattaacttatcctgagggagttactccatggaatgttttcaagatgaggaat
gctattgtcaatggttctgaaatacatcctggagctacacactatattgataaagcatct
aagaagttgccacaacagagggaggaccgcgttaaattgtcaagaaagctaccttcttca
gaaggggcagggacgcaacacaggaagggatcagagtatgaaaacaaagttgtacgtcgt
cacatggaagatggggacgttgttcttgttaatcgccagcctacacttcacaaacccagt
ataatggctcatatagttcgtgtattgccaggggagaaaacattacgcatgcactatgca
aattgcagcacttacaatgctgattttgatggggatgaaatgaacgttcatttgccacaa
gatgaaatttcccgagccgaagcttacaatttagtgaacgcaaataatcaatacgtaaag
cccactagtggtgatccaattcgagccttaattcaggaccatgttataagtgctgtcctc
cttacaaaaaaagatacctttctccactcagatgaatataatcagcttctttatagttct
tctgtttcagcatgtggtttggacactttctctggaaaaccaggtcaaaaggttctatca
tccaactctgaaggtgcaatgcaagcccttcttccggcaatttggaaaccagtgcgtctg
tggactggaaagcaggtcatcagtaccttgctaaatcatattacaagtggatctccacca
cttactgttgaaaaggaagcaaaacttccatctgggtttttcaactgtaagactcttgaa
gaagaagataaatctgataaaggtcgacgaacaaaagagaagaagtctagaaaagaagaa
gctggtaatgatgatctgaaggaaagagaggagccagatgagagcaaattgttaatctat
agaaacatcttggtgcgtggcgtgattgacaaaaatcagtttggtgattatggtttggtc
cataatgtgcaagaattctatggttcagaagctgcaggaaaattgctttctgtttttagc
cgtttatatactgtttatttacagatgcatgggttcacttgtggagttgatgatcttttg
ctaatacaaagcaaagacgagaaaatgaaggaacaacttgaaagttgtgaagagcttggt
gaaaaagtattccgtgagtttattggtgccagacaaagtaaaaggaaagatccactgata
ctgcgatcggatatcgaagaatttttacgcaacaatggagaatctgtatcggaaatgttg
gacaggaaaatgacgagtgaacttaataagaaaatctccaaatctgatgtctttaaacaa
ttgtttaagaaagggttatcaaaaccatcagttaagaattatatgtatcttatgacaagc
tctggcgctaaaggtggtgtggcaaatctccaacaaattgcttcatacttgggtcagcaa
gaactagaaggaaaacgagtccctcaaatggtttctggaaagaccttaccatgcttccct
ccatgggattggtcacctcgagctggaggttttattattgatcgctttctaactggtctt
catcctcaggaatattattttcactgcatggctggccgtgaagggctggttgatacagct
gtcaaaacatctcgtagtggctacttgcaaagatgccttattaaaaatctcgaatgcctt
aaggtttcttatgattatactgtccgtgatgcggatggttcaattgttcaattccgttat
ggggaggatggtattgatgtccatttgacaagctttatcaaaaaatttgaaaaattggca
aataataaagaaatgtttgacgagagagttggtcatcaaatcggtgaatacccctttatt
gaagagttgcctcctgcctataaaaaaagagcaggcctcaacataaagttaatggagcac
aaatatctcagcagtcttgcacaaccaggagaaccagttggtgttcttgctggtcagtct
gtaggagaaccatctacacagatgactctaaataccttccataatgctgggcgaagtgaa
atgaatgtgactcttggaattccacggctccaagagatcttgatgactgcttcaagtgat
atcaagactccagttatgacgtgtccattgataaaggagaaagcggaggatgctaaaagt
atagctgataggttaaagaggatcactgtggccgacataattgagagcatgaaagtaaat
attacaccatttacacatcaagatcataaggcctgccgtatttataagcttgagatgata
ctctatataccacaacatctttcgaaattttcagaagactgggaggaactcctagaggtt
aagtttgtcagggccttggaggatgccatacaaaatcatttggttttgctatccaaaatt
agtggtataaaagatataaaggctgattcactgccaaaggcatcaaatgagacggatgaa
gacgtttcttgtaacatatcccagcatgaggcaggagatgatgatgatggcgatgtagat
gacagtggtgaaggagctgaagactttgggttggatgcacataaacaaaagcggcagggt
acagatgagatggagtatgaagatgactgtgaggaagaagtgactgaagctcattatccc
gatggagaaagcgaaattgataagggggatagtgacgttgaagtcgataacgatggtgtg
tcggggatctctgatgctaatgatgaaatggatgaaaggccattaacgggagacacatct
aagccacactcaaaaggaaaaaagaccgaatcaagggataaaataaaaaaaaaggcaaga
gcgaaactagtaagaaaggagtatgacagggcaacttttgtgtcagccaagggatttcac
tttgagatccattttaaatttaccaatgaacctcatattcttctggatcagattgctcgg
aagacatcccgaaatgtttgtgtcaaaagctctggcaagatattggattgcaaagatatt
gatatttatggtaatgaagatcaagtttactgctcctgggaggatcccaaaaatcccaca
gaagaagaaaagaagatgcgagccttgcagacagcaggcgtggattttcctacactatgg
aaactgcatgattatcttgatgttaactatatatattccaacaacattcatgctatgctg
accacctatggagtagaagccgccagagaaactatcatcaaagaaataagtaatgtcttc
aaggtttatgggatatctgtcaatatccgacacctttcgctaatagctgactacatgact
tatagtggtggttaccgtccaatgaacagatttgggggtatagcagagtctatatcgccc
atcaataaaatgtcatttgagacggcttccaagttcattcgtgaagcagcataccatggg
gagacggatgacttggaaacaccatctgctaggatatgtcttgggctgccagtaaaagtg
ggcactggctcgtttgatgtgatgcagaagattgagatttag
DBGET
integrated database retrieval system
