Argentina anserina (silverweed cinquefoil): 126798249
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Entry
126798249 CDS
T10558
Name
(RefSeq) protein VACUOLELESS1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
126798249
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aans04131
]
126798249
Membrane trafficking [BR:
aans04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
126798249
Hops complex
126798249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
WD40_WDHD1_1st
Motif
Other DBs
NCBI-GeneID:
126798249
NCBI-ProteinID:
XP_050381114
LinkDB
All DBs
Position
6:29671881..29677277
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AA seq
857 aa
AA seq
DB search
MANVSVAAEWQLLYNRYYRKPEVYRMTWSHVDLSRNKVACAPFGGPIAVIRDDSKIVQLR
GESAQRKLRIFNSSGLLLGETLWKHPGGRLIGMSWTDDQTLACLVQDGTVFRYNLHAEIL
LPNISMGKECFERNVVDCVFWGSGVVCLTESNQLFCISDFHNPNPVQLADPGIEDPPYCM
AVIEPQYTMSGNVEVLLGISEPWVLAVEEDGVQQLGADVLRGPLQKMAVSRDGQWLASFT
HDGRLLVMTSNLNEILIEQECESALPPEQLAWCGMDTVLLYWDDILLMMGPRGDPVRYFY
DEPVVLIPECDGVRILSNSSMELLQRVPDSTESIFKIGSTSPAALLFDALDHFDRRSAKA
DENLRLIRASLSEAVEACIDAAGHEFDLSRQKTLLRAASYGQAFCSNFQRDHIQEICKTL
RVLNAVRHPDVGMPLTIQQYKLLTPSVLIARLINSYKHLLALRISEYLGMNQEMVIMHWT
CSKITASLAIPDATLLEILLDKLKLCKGISYAAVAAHADKNGRRKLAAMLVEHEPRSSKQ
VPLLLSIGEEDSALMKAIESGDTDLVYLVLFHIWQKREPLAFFKMIHPKPLARDLFVIYA
RCYKHEFLKDFFLSAGQLQEVAFLVWKESWELDKNPMASRGSPLHNPRIKLIESTTKLFG
GFKEKESSSLFGEHNKDKDFTFELKASEEHAKLLRMQHDLEVSTKQAIFVDSSISDTIRT
CIVLGNHKAAMKVKTEFKVSEKRWYWLKAFALATVRDWDTLEKFSKEKNRPPSGYKPFVE
ACIEADERGEALKYIPKLTDARDRAEAYDRIGMAREAADAASQANDGELLGRLRSTFSQN
PAASSIFDTIRDRLGVS
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgtctcggtggccgcggagtggcagctcctctacaaccgctactaccgcaag
cccgaggtctaccgcatgacctggagccacgtcgacctcagccgcaacaaggtcgcctgc
gcccccttcggcggccccatcgccgtcatccgcgacgactccaagatcgtccagctccgc
ggcgagtccgcccagcgcaagctccgcatcttcaactcctccggcctcctcctcggcgag
accctctggaaacaccccggcggccgcttgatcggcatgtcctggaccgacgaccaaacc
ctagcctgcctggtccaggacggcaccgtcttccgctacaacctccacgccgagatcctc
ctccccaacatctccatggggaaagagtgcttcgagcgcaacgtcgtcgactgcgtcttc
tggggcagcggcgtcgtttgcctcaccgagtccaaccagctcttctgcatttccgatttc
cacaacccgaacccggtccagctcgccgacccggggatcgaggacccgccctactgtatg
gccgtgatcgagccgcagtacactatgtcaggcaacgtcgaggttctgctcgggatctcc
gagccttgggttttggcggtggaggaagacggcgtccagcagttaggcgctgacgtcctc
cgtggaccgctgcagaagatggccgtctctcgcgacggccaatggctggcttcgttcact
cacgacggtcgcttgttggtcatgacttcgaatctcaatgaaatcctaattgagcaggaa
tgcgagtcggcgctgccgccggagcagctagcgtggtgtgggatggacacagtgttattg
tattgggacgatatactgttaatgatgggtcctcgaggggatccggtgcggtatttttat
gatgaaccggttgttctcattccggaatgtgatggagtgaggatactgtcgaattccagc
atggaacttcttcaacgagtgcctgattcgactgaatcgatatttaaaattgggagtacg
tcgcctgccgctttgttgtttgatgctttggatcattttgacagacggagtgctaaggct
gatgaaaatttacgacttatacgggcatccttgtcggaggctgttgaagcatgtattgat
gctgccggtcatgaatttgatctctcacgtcaaaagacactgctaagagctgcaagctat
ggtcaagccttttgcagcaattttcaacgtgatcatattcaagagatatgtaaaactttg
cgagtattaaatgcggtgcgccatcctgatgttggaatgcctcttactattcaacaatac
aagttgcttacaccatctgttctgatcgctcgtttgattaattcctacaagcaccttctt
gcactaaggatatcagaataccttggaatgaatcaagaaatggtgataatgcactggaca
tgttctaagataacagcttccctggcaattcctgatgccactctccttgaaatcttactt
gataagttgaaactatgcaaaggaatatcatatgcagcagttgctgctcatgcagacaag
aatggccgccggaagttagccgctatgcttgttgaacatgaaccgcggtcctccaaacag
gttcccctcttattgagcataggagaagaagactcagctttaatgaaggcaattgaaagt
ggtgatacagaccttgtgtatcttgttctgtttcatatctggcaaaagagagagcctttg
gcttttttcaaaatgatacacccgaaacccctggcacgcgatttgtttgtgatatatgca
cggtgctataaacatgaatttttgaaggacttcttcctatcggctggacaacttcaagaa
gtggctttccttgtgtggaaagaatcttgggaacttgataaaaatccaatggcaagcaga
ggatctcccctgcataaccctcgcattaaactgattgagagcaccactaaactctttgga
ggatttaaggagaaggagtccagtagtctattcggagaacataacaaggataaggacttt
acctttgaattaaaggcctctgaggaacatgcaaaattgttgagaatgcagcatgatcta
gaagtgtctacaaagcaggctatttttgttgattctagtatcagtgatacaattcgtact
tgtattgtgctgggaaaccataaagcagcaatgaaagtaaaaactgaatttaaggtttct
gagaagagatggtattggctgaaagcttttgctctggctacagttcgagattgggatacc
ctggagaagttttcaaaagaaaagaatagaccaccaagtggttacaagccatttgttgag
gcatgcattgaagcagatgaaagaggggaagctttgaaatatatcccaaaactcacggat
gctcgagacagagctgaggcttatgatcggattggcatggccagggaagcagctgatgct
gcctctcaggcaaatgatggggaattgcttggtcgactaagatcgacgttttcacaaaat
cctgcagcttcgtcaatttttgatactattcgagatagattgggcgtttcatag
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