Argentina anserina (silverweed cinquefoil): 126799503
Help
Entry
126799503 CDS
T10558
Name
(RefSeq) dicer-like protein 4 isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
aans Argentina anserina (silverweed cinquefoil)
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aans03036
]
126799503
Chromosome and associated proteins [BR:
aans03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
126799503
microRNA pathway
RISC loading complex
126799503
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
DEAD
Helicase_C
ResIII
dsrm
DND1_DSRM
PAZ
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
126799503
NCBI-ProteinID:
XP_050382675
LinkDB
All DBs
Position
1:complement(706588..717915)
Genome browser
AA seq
1638 aa
AA seq
DB search
MDDAPSTTEREVVESGHGAPRPEKDPRRVARRYQLELCQKALEENIIVYLETGCGKTHIA
VLLMYELRHLILRPQKNICVFLAPTVALVQQQARVIEDSLDLKVGTYCGSSKQLKTHQDW
EKEIEQYEVLVMTPQILLRNLYHRMIKTELIALLIFDECHHAQITSNHPYAEIMRYCKSD
VTKLPRIFGMTASPVVGKSTSSQANLSKSINSLEILLDAKVCSVEDKTELYCSVVSPVIY
VHSYGPVVSGTSSLLMTFYSKLEQVKRQCIAELSKKTSDYQSIRSTKKTLNRVHDSIMFC
LENLGLWGALQAKNILLSGDHIERNELIEEGNNGTEAERDYSADAVCAEYLAQASDIIRG
DYMKDAVISGLSCIDILKEPFLSSKVLRLIGILSSFRLQQNMKCIIFVNRIVTARSLSYI
LQNLKNLASWKNDFLVGVHSKLKSMSRKTMQITLDKFRSGELNLLVATKVGEEGLDIQTC
SLVIRFDLPETVASFIQSRGRARMPQSEYVFLVNSGSQKELDLIETFRKDENRMNMEVAF
RTSSETFVSPEEQTYIVASSGASITSGYSISLLHQYCSKLPHDEYYVPSPEFYFLSDVEG
TICHIILPSNAPMHQIVSAPRPSMEDAKRNACLKAIEELHKLGALSDYLLPLQDNADVEE
CLLDSSDSETTDGEDSRGELHEMRVPAVLKESWNKLESLVTLRSYYIKFDPEPNDRIYRS
FGLFLKAPLPAEAETMELDLHLAHGRSVMTKLVPSGCAEFVNDEILLAQNFQEMFLKFIL
DRAEFVSEFVPLGKYDFSRSSSSTFYLLLPVFLGENDKISIDWGIIRKCLSSPVFSGPGG
VIDSNIISMGIRLASGYRSISEVENSVVYVPYKKTFYFITNVCGERNAYSQYKENPDAIT
YVDHLSKKFEILLVYPEQPLLCAKPVFSLHNLLHTRRQEVSEVQQLDEYFIYLPPELCEL
KVIGFSKDIGSSVSLLPSIMHRLENLLVAIELKHVLCTSFPEGAEVTAQRVLEALTTEKC
QERFSLERLELLGDAFLKFAVGRHFFLLYALLDEGELTRKRSNVVNNSNLLKLATRSNLQ
LYIRDQPFEPSQFFALGRPCKNICDHGANESIHSQDLCKAAKDLHTREVRCSKGHHWLHY
KTIADVVEALVGAFIVDSGFKAAIAFLNWIGIKVDFEASEVTKVCIASSRYIPLAAYIDT
AALESSLGYQFLHRGLLLQAFVHPSYNKNGGGCYQRLEFLGDAVLDYMITSYLYSVYPKL
KPGHMTDLRSISVNNKTFATVAVARSFHKFLVSDSCTLSEAIKTYVNFIETSAPDSNLVN
GPTCPKALGDLVESCLGAILLDTGFDLNLVWKIMLSFLKPVMSFSNVQFSPVRELRELCQ
AHSWDLKFLPSKKGKTFSVEATVKGNNVSATVSSTGLNKKDAIRSSAQLVFEKLKAQGNI
PKSKLSLEEVLKSSCKMEAKLIGYDETPVDVTAPYTIEFENLNLQEPSSRSLKSEVDSIS
EVSSSYSSIKRVGRPPASRGAVKVDCTDSSNNHSTDANSKNRGAPHNLTARAHLYETCAA
NYWEPPVFECCKDDGPSHLKSYIFKVTMKMDDASDTLLEAVGAPRTSKKAAAEQAAEGAL
WFLIKNGYIEKSGQTEEP
NT seq
4917 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgcgccttccacaactgagagggaggttgtggagtcgggtcatggagctccg
aggccggagaaggatccgaggagagttgcccggaggtaccaattggagctgtgtcagaaa
gctttggaggagaacataattgtgtatctggaaactggttgtggaaagacccacatagct
gtgctgcttatgtatgagctgcgccacttgatactgagacctcagaagaacatttgtgtg
tttcttgcacctacggttgcacttgttcaacagcaagcgagagttatcgaagattccctt
gatttgaaggttgggacctattgtggaagctctaagcaattgaaaactcatcaagactgg
gaaaaagagattgaacaatatgaggttcttgttatgactcctcaaatattgctgcgtaac
ctataccaccgtatgattaagacggagttaattgcattgctaatttttgatgagtgccat
catgctcaaattacaagcaaccatccatatgcagaaattatgcgatactgcaagagtgat
gtcacaaaacttcctcgtatatttggcatgaccgcatctccagttgtgggtaaaagcact
tctagtcaagccaatttatcaaagagtatcaatagtcttgaaattttacttgatgctaag
gtttgttcggttgaagacaagacagaattgtattgttctgttgtttctcccgttatatat
gtacatagttatggtcctgttgtcagtggcacatccagcctcttaatgactttttatagt
aaacttgagcaagtgaaacgccagtgtatagcggaacttagtaagaagaccagtgactac
caaagtataaggagtacaaagaaaacgttaaacagagtgcatgacagtataatgttttgc
ttggaaaatcttggcctctggggggcattacaagctaaaaacattcttttgagtggcgat
cacattgaacggaatgaattaatagaggaaggcaataatggtacagaggcagagcgagat
tatagtgctgatgctgtgtgtgctgaatatctggctcaggcttctgacatcattcgtggt
gactatatgaaagatgctgtcatatcgggtctatcttgtatagatatcttaaaggagcca
tttttgtcaagtaaggtcttacgtctgattgggatcctttcatccttcaggttgcaacag
aatatgaaatgcataatttttgtcaataggattgttactgcaagatccttgtcctacata
ctacaaaaccttaagaatctagcttcctggaagaacgattttcttgtaggagtccactct
aaactgaagagtatgtcaaggaaaacgatgcagatcactcttgataagtttcggtccgga
gagttgaatctattggttgcaactaaagttggtgaagagggactagatattcagacttgc
agccttgtgatacgatttgatcttccagaaactgttgctagctttatacagtcaagaggt
cgtgcacggatgcctcagtctgaatatgtatttttggtaaacagtggtagtcagaaagag
ttggatctaatagaaacctttagaaaagatgaaaatcgaatgaatatggaagttgctttc
agaacatccagtgagacttttgttagtccggaggaacaaacatatatagttgcttcttct
ggagcttccatcacttcgggttatagcatctcattgttacaccagtattgttcgaagctt
ccacatgatgagtactatgtccccagtccagaattctattttcttagtgatgtagaggga
actatttgccatataatattaccttccaatgctccaatgcatcaaattgtcagtgcacca
cgaccttcaatggaagatgccaaaagaaatgcttgtctaaaagctatcgaagaattgcat
aaattgggtgccttaagtgactacctcttgccactgcaagacaatgcggatgtggaggag
tgtttgctagactcttctgattctgaaaccacagatggtgaagactcgcgaggggaacta
catgaaatgcgggttcctgctgtcctaaaagagtcatggaataaattggagagtcttgtc
accctccgctcttactatataaaatttgatcctgaacctaatgatagaatctatagaagt
tttggtttatttctcaaggcacctcttccagcagaggccgaaacgatggaacttgatctt
catctcgctcatggtagatccgtaatgaccaagttggttccatctggatgtgcagaattt
gtcaatgatgagatcttgctggctcagaacttccaagaaatgttccttaagttcattctg
gaccgagcagaatttgtttctgaatttgttccattgggaaagtatgattttagcagatcg
agctcatcaaccttctacctattgcttcctgtatttttgggtgaaaatgataagatcagc
atagattggggcattatcagaaaatgtttatcctctccagtattcagtggtccgggaggc
gtaatagacagtaatattatatctatgggtattcgacttgcatctggttatagaagcatc
agtgaagttgagaatagtgtagtgtatgtcccatacaagaagacattttacttcatcacc
aatgtttgtggagaaagaaatgcgtacagccaatacaaagaaaacccggacgctataacc
tacgtggatcatcttagtaaaaagtttgaaattttgcttgtataccctgagcaacctctt
ctgtgtgcaaaaccagttttctctctgcacaacttgctacacactcgtaggcaagaagtt
tcagaagtgcagcaactagatgagtattttatatatctgcctcctgagctctgtgagctg
aaggtaattggattttcaaaagatattgggagttcagtatctctgttaccatcaatcatg
caccgtctggaaaacttgcttgttgccatcgaactaaagcatgtattatgcacttcattc
cctgaaggagctgaggttactgcacagagagttttagaagctctcacaacagaaaagtgc
caggaacgattttctcttgaaaggcttgaactactaggtgatgctttcctcaaatttgca
gtcggacggcactttttccttttgtatgcattgcttgatgaaggtgaactaacaaggaag
cgctcaaatgtggtaaacaattccaatttattgaagctggctactagaagcaacttacag
ttatacatacgggatcagccctttgaaccctctcagttcttcgctctaggccgtccttgc
aaaaatatttgtgaccatggggcaaatgaatcaattcattctcaagatctatgcaaagca
gcaaaagacttgcatactcgtgaagtcagatgtagcaagggtcaccattggttacattat
aaaacaattgctgatgttgttgaagcccttgttggtgcattcatagttgatagcggtttt
aaagctgcaattgcatttctcaattggattggcataaaagtagattttgaagcatcagaa
gttactaaagtatgcatagcaagcagcagatacattccacttgctgcttacatagacact
gctgccctcgaaagttcattagggtatcagtttctccacagaggtttgctgttacaggcc
tttgtacatccttcttacaataaaaatggaggaggctgctatcagaggttggagtttctt
ggagatgctgtcttggattacatgatcacttcatacctgtattcagtttatccaaagtta
aagcctggccatatgacagatctcagatctatttctgtgaataataaaacattcgctact
gttgcagtagctcgatccttccacaagtttctagtctcggactcctgtaccctctcagag
gctataaagacttatgtgaacttcattgagacatctgcaccagatagtaatctggttaat
gggccaacatgccccaaggctctgggtgacttggtagagtcttgtcttggtgcaattctt
cttgataccggattcgatttgaaccttgtttggaaaataatgctatcgttcctgaaaccg
gttatgagcttttccaacgttcagtttagtcctgttagggaactaagggaactttgccaa
gctcattcatgggatcttaagtttttaccatcaaagaagggtaaaacattttcagttgag
gcaacggtgaaggggaataatgtttctgcaactgtctcctcaactggcttgaacaaaaag
gacgctattagaagttctgctcagttagtttttgaaaagttgaaggcgcaaggcaatata
ccgaagtctaagttatctttggaggaagtcttaaagtcaagctgcaagatggaagccaaa
cttatcggatacgatgaaacaccagtagatgttacagctccgtatacaattgaatttgag
aacttaaatctacaagagccttcaagcagaagtttgaaatcagaagtggattctatcagt
gaagtgagcagtagttactcctccataaaacgagtaggacgacccccagcttcacgtgga
gcagtcaaagtggactgcactgattcctctaacaatcatagcactgatgctaactcaaaa
aacagaggtgcgccgcacaatctaacagccagagctcatctatatgaaacctgtgctgct
aactattgggaaccccctgtatttgaatgttgcaaagatgatgggccgagccacttaaaa
tcgtacattttcaaggttacgatgaagatggatgacgcttcagatacccttttggaggcc
gtcggagcacctcgtacgagcaagaaggcagccgcagagcaagcagcggaaggcgcactt
tggttcttgataaagaatggttacatagagaagagtggtcagacagaggaaccttaa
DBGET
integrated database retrieval system
