Argentina anserina (silverweed cinquefoil): 126799762
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Entry
126799762 CDS
T10558
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog A-like
KO
K08775
breast cancer 2 susceptibility protein
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans03440
Homologous recombination
aans03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
126799762
03460 Fanconi anemia pathway
126799762
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aans04121
]
126799762
03036 Chromosome and associated proteins [BR:
aans03036
]
126799762
03400 DNA repair and recombination proteins [BR:
aans03400
]
126799762
Ubiquitin system [BR:
aans04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
126799762
Chromosome and associated proteins [BR:
aans03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
126799762
DNA repair and recombination proteins [BR:
aans03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
126799762
FA (Fanconi anemia) pathway
Downstream FA components
126799762
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
BRCA2DBD_OB2
Motif
Other DBs
NCBI-GeneID:
126799762
NCBI-ProteinID:
XP_050382987
LinkDB
All DBs
Position
1:complement(16889508..16897761)
Genome browser
AA seq
1216 aa
AA seq
DB search
MSTWHLFPDAGENFRWRISGPGPNAPPPDAAFYPDNEDPSSSNRLPSMADLLLQGCSKLA
VESQMNHGGGVAMFRSGLGRSVSVKPSSLAKAASLLASDSGRIRGSEGEIRGGGFGDSLF
QTASGKAVNISSKGLVKAKKLLSLGDESEDCDLLSGSSGGEVKEAVSVSRSSVNYMNGSA
DSGITNVSSLSSKQAEVCSAAHTPSSVKLCTSGGRSNSVSSDGCKAGSLQTGFENEFNQS
YMKSEVTPSSVQLDTLSGRTVSVSNNAHKTGSVQSRFKNESKLNHIQSKMPSSVCTPSPG
GSFDSLSTDAHKTDSGQSGVTYDTDLSFIQSHKPNLAPKPPSIKFNTAGGRSISVSTDAL
QRARSLLGDPDLGTLLNEGYSDADLTFLKGREHESRTASSHQKIPKTKFLTKSFVSPLQS
SSDQVRTSAVKSDSTNWGTNLISQFDVVSNENARSELSCGKRPFSNTPCALTTVENNNLA
NGTVERINHVERSLAKPLVDISNTIGTTSLSNIQMAGVKRRLGGNSISSFKKPRISNFST
PLHRDIPIVPKGLPTFPSNHSSFKVRVSTRYPVLAARMSMKKYFGMPPSDQTTVDCISDQ
VRRVTATNAEDYMFPKESGLNYIGAEAVFRMLASSGASTQNTSREWVINHYKWIVWKLAC
YERNYPTKALGKFLTLPNVLEELKYRYEREVNHGHRSAIKKILEGDASASSMLVLCISAI
RSKHDPNINTSSGAGNSSGAKVELTDGWYSVDAILDALLSKQLASGKLFVGQKLRIWGAG
LCGWVGPISPLEVSREVILRLHINGTYRAHWDDRLGFCNQVGSPLAFKCIKTDGGLVPWT
LIGIKRIYPVLYKERLSNGRSVVRSERLETKMMQSHCQRRSNVIEGIISEFQRGLEHSQT
CNERDSEGAKLLRMLETAAEPEVLMAEMSTEQLNSFTKYRAKLEAIKQSDMEKSIMKALE
DAGLAEREVMPLMRVRVVGLTRNIYEGKDSPKEGLITIWNPSEKQKSELVEGQAYTVSDL
IPTSPSADILYLLARGSKTKWKPLSQQATDHFRPFFSPRKSILLSDFGQIPLSSDFDIAA
FVVFVGDVYTAGHQKKQWVFVTDGSISVSKSEELNNSLLAICFCSPHIDDQPDAPINYNL
TGSTVGFCNLIKRAKDQVNALWVAEATENSGYFLCFDSRHCSHLKGAAASAERWGRISSL
KINRLKERVLCIIGKG
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgtggcacttgttccccgacgccggcgagaatttccggtggcgaatctcaggt
ccgggccccaacgccccaccgccggacgccgccttctatccggacaacgaagatcccagc
tcgagcaatcgcctgccttccatggccgacctgttgcttcaaggctgctcgaaactcgcg
gtggagagtcagatgaatcacggcggaggcgtcgcgatgttccgcagtggactcggtaga
tccgtttccgtcaagccttcgtcgttagccaaagcggcttcacttctcgcctccgattca
ggccgaataagaggtagtgaaggagagattagaggcggtggtttcggtgattcacttttc
cagactgcatctgggaaagcggtgaatatatcttccaaaggtcttgtcaaggctaagaaa
ttgcttagtttgggagatgagagtgaggactgtgatcttttatcgggttccagtggtggc
gaggttaaggaggctgtatcggtttcaaggtcttcggtgaattatatgaatggttcggcg
gatagtggaataacaaatgtgtccagtctgagttctaagcaagctgaagtgtgtagtgca
gctcatacaccttcatcagttaagttatgtacgtccggaggaagatctaattctgtttct
tctgatggatgtaaggctggttctttgcagactggatttgagaatgagtttaatcagagt
tatatgaaatccgaggttacaccttcatcagtccagttagatacactcagtggaagaaca
gtgtctgtttcaaataatgcacacaagactggttcagtgcaaagtagatttaagaatgag
tcaaagctgaatcatatacaatccaaaatgcctagttcagtgtgtacgccttcaccagga
ggaagctttgattctctttccactgatgcacataagactgattcagggcaaagtggagtt
acatatgacactgatctgagttttattcaatcccataagcctaatttagcacccaaacct
ccatcaatcaaattcaatacagctggaggaagatctatatctgtttccactgatgcacta
caacgtgcaaggagtctccttggtgacccagacttgggaactcttttgaatgaggggtat
tcagacgcggatttgacatttttaaaaggtagagaacatgaaagtcgcactgcctcttcc
caccagaaaatccctaagaccaaatttttaacaaagagttttgtatctccactgcaatca
tccagtgatcaagtgcggacatcagcagtcaagtcagatagtacaaattggggaactaac
ctgatcagccaatttgatgttgttagcaatgaaaatgcccgcagtgagttgtcttgtggc
aaaagacccttcagcaacacaccctgtgccctcactacagtagaaaacaataatttagca
aatggcactgttgaaaggattaaccatgttgaaagatcattagccaagccactggtggat
atttcaaataccattggcaccactagtctgagtaatattcaaatggctggtgtaaagagg
aggctaggaggaaattccatttcgtcgttcaagaagcctcgcatatccaacttctccact
ccattgcatagggatattccaattgttcctaagggtttgcctacatttccctctaaccat
tcaagtttcaaagtaagggtttctactcgatatcctgtcctggcagctagaatgtctatg
aagaaatattttggaatgccaccatcagatcaaaccacggtagactgcatttcagatcag
gtgagaagagttacagcaactaacgcagaagattacatgtttcctaaggaatctggctta
aactacataggggcggaagctgttttccgcatgttggcttcttccggagcctcaacacaa
aatacttccagagagtgggtcattaatcactacaagtggattgtctggaaactggcttgt
tatgaaagaaactatccaactaaagctttaggaaagtttttgacgctgcccaatgtgctt
gaagaactgaagtatagatatgaaagagaagtgaatcatggtcaccgctctgcaattaag
aaaatactggaaggagatgcctcagcttcttccatgttggtcttatgcatttcagctatc
cgctcaaaacatgaccctaatataaacactagctcaggagctggaaatagcagtggtgca
aaagttgaactaactgatggatggtattcagttgatgccattctggatgctctcctatca
aagcagcttgctagtggaaaattgtttgttggacagaaacttcggatctggggagcagga
ctctgcggctgggttgggcctatttcaccccttgaggtgtcgagagaagttattttacgg
ctacacataaatggcacatatagagctcattgggatgatcgattgggattttgcaaccaa
gtaggttctcccttagcgtttaagtgcatcaagaccgatgggggtcttgttccttggact
cttataggaatcaaacggatataccctgtgttatacaaagaaaggttgagtaatggaaga
tctgttgtgagatcagagaggttggagaccaaaatgatgcaatcacattgccagaggcgc
tctaatgttatagagggcattatttctgagttccaaagaggactagaacattcacaaaca
tgtaatgagagagatagtgaaggggcaaaactcttgaggatgctagagacagctgctgag
cctgaagttttgatggcagagatgagtacagaacaattgaattcttttaccaaatatcga
gcaaaattagaggcaatcaagcagtcagatatggagaaatcaattatgaaagcactagaa
gatgctggattagctgagagggaagtgatgccattaatgagggtgagagtagttggacta
actagaaacatatacgaaggaaaagacagtcccaaagaaggcttaataacaatctggaac
ccatcagagaagcagaagtctgagttggtcgaggggcaagcatatactgtttctgacctt
attccaacaagtccgagtgctgatattctatacttgctagcaagaggttctaaaacaaaa
tggaagcctttatctcagcaggcaacagaccactttaggccctttttcagtcctcgcaaa
tcaatattattgtcagactttggtcaaattcctctttccagtgattttgatattgccgca
ttcgttgtgtttgttggggacgtttatacagctggtcaccaaaagaaacagtgggtcttt
gtgacagatggctctatttctgtgtcaaagtcagaagaattaaataattcattacttgct
atctgcttttgttcaccgcatattgatgatcaaccagatgctcctataaactacaacctc
acaggttcaacggtcggtttttgtaatctcatcaagagagcaaaggaccaagtgaatgct
ctatgggtagctgaagctacagaaaactcgggatactttttgtgttttgactctcgacat
tgttcacatctcaaaggtgctgctgcctctgctgaaagatggggaaggatctctagcttg
aagatcaataggctcaaggagagggttctatgtataattggtaaaggctaa
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