Argentina anserina (silverweed cinquefoil): 126799994
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Entry
126799994 CDS
T10558
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4-like protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126799994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aans03041
]
126799994
Spliceosome [BR:
aans03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
126799994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40
Beta-prop_WDR3_2nd
WD40_Gbeta
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_Aladin
NBCH_WD40
PRP4
Beta-prop_WDR41
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_DCAF4
WD_LRWD1
Beta-prop_IFT122_1st
Beta-prop_Vps41
Beta-prop_SCAP
eIF2A
WD40_like
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
126799994
NCBI-ProteinID:
XP_050383220
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Position
6:16990697..16994674
Genome browser
AA seq
523 aa
AA seq
DB search
MTMEEEEEKLLSAIAASDPNAEPAPIPTHSSDSDSDSDADAAAQPPSSSSAAGLEYQISD
EQKQLRERQERAKQQLLMKRRASALAVPTNDNAVRARLRRLGEPMTLFGEREMERRDRLR
MILSKLDSAQLETLLKSHEDDEASANADDSDFEQEIEYPFFTEATRPRALREARVHIAHY
SMPRAALRLQRARRREEDPDEDVDAEINWALGQASSLKLDCSEIGDDRPLSGCSFSQDGA
MLATCALSPVAKLWGMPQVTKVATLKGHTERLTDVAFSPVRNNLLATASADRTARLWNGE
GGHVMTFGGHLDRLARIAFHPSGNYLGTTSFDKTWRLWDVETGEELLLQEGHSRSVYAID
FHLDGSLVATAGLDALARVWDLRSGRSILTLEGHVKKVLALSFSPNGYHLATGGEDNTCR
MWDLRKKKSIYIIPAHSNLISQVKFEPQEGYFLVTGSYDMTAKIWSARDFKPVKTLSGHE
AKVTSLDVSGDGHHIATVSHDRTIKLWSSGTSETEKDQEMDVD
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgacgatggaggaggaagaggagaagcttctctccgccatagcagcctccgacccaaac
gccgaacccgcacccatccccacccactcctccgactccgattccgattccgatgccgac
gccgccgctcaaccaccctcctcatcctccgccgccggactcgagtaccagatatccgac
gagcagaagcagctgcgcgagcggcaggagagagccaagcagcagctcctcatgaagcgc
cgcgcctccgccctcgccgtccccaccaacgacaacgccgtccgcgctcgtctccgccgc
ctcggcgagccgatgactctgttcggggagcgcgagatggagcggcgcgaccgcctgagg
atgattctctccaagctcgactcggcgcagctggagacgctcctcaagtctcacgaggac
gacgaggcttctgccaatgccgacgactctgacttcgagcaggaaattgagtatccattc
ttcactgaggcgaccaggcctagggctctgcgtgaggctagggttcatattgcgcactac
tccatgcccagggcggcgttacggcttcagcgtgcgaggaggagggaggaggatcccgat
gaggatgtggacgccgagattaactgggctctagggcaggcctcgagcttgaagcttgat
tgcagtgagattggagatgacaggcctctttcgggctgttcgttttcacaagatggcgca
atgcttgccacctgtgctttaagtccggtggccaagttgtggggcatgcctcaagtgaca
aaggttgccaccttgaagggacacacagagcgtttaaccgacgttgcattttctcccgtg
cgaaacaacctcctggcgactgcctctgctgataggactgcgaggttgtggaacggcgaa
ggagggcacgtgatgacgttcgggggacatttggaccgtcttgcccgtattgccttccat
ccctcaggaaattacttgggtacaactagctttgacaagacttggaggctgtgggacgta
gagactggtgaagagttgcttcttcaagaaggtcacagtaggagtgtatatgctatagac
ttccatctggatggctcattggttgcaactgctggattggatgcacttgctcgtgtttgg
gacctccgtagtggtagaagtattcttaccctggaaggccacgtaaaaaaagttcttgca
ctcagtttttcaccaaatggttatcatctagccactgggggtgaagacaacacatgcagg
atgtgggatttaagaaaaaagaaatccatatacattattccagcacactccaatctcata
tcacaggtcaaatttgaacctcaagagggatatttcttggtaaccggctcctatgatatg
acagcaaagatctggtctgcccgagattttaagcctgtcaagaccctctctggacatgaa
gcaaaagttacttctttggatgtttcaggagatggacatcacattgctactgtatcacat
gaccgaaccatcaaactgtggtcgagcgggaccagtgaaactgagaaggaccaggaaatg
gatgttgattag
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