Argentina anserina (silverweed cinquefoil): 126800858
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Entry
126800858 CDS
T10558
Name
(RefSeq) ubiquitin receptor RAD23b-like
KO
K10839
UV excision repair protein RAD23
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans03420
Nucleotide excision repair
aans04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
126800858
09124 Replication and repair
03420 Nucleotide excision repair
126800858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
aans03051
]
126800858
03400 DNA repair and recombination proteins [BR:
aans03400
]
126800858
Proteasome [BR:
aans03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
126800858
DNA repair and recombination proteins [BR:
aans03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
126800858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
CUE
UBA_3
TECR_N
UBA_RAD5A
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
126800858
NCBI-ProteinID:
XP_050384235
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Position
6:21262013..21266818
Genome browser
AA seq
365 aa
AA seq
DB search
MKLTVKTLKGSHFEIRVQPTDTVMGVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDETTLA
DNKVSEDGFLVVMLSKSKTSGLVGTSSAQPASTIPPTTAPISNSTTRAEAPVQAPPSEST
VPPSDTADMHTDTYGQAASNFDQTIQQIMDMGGGTWDRETVTRALRAAYNNPERAVDYLY
SSIPETAEVPVPVAHFPASQATETGIGNATPVSGAPNSAPLNMFPQEALSGAGAGALGSL
DFLRNNHQFQTLRSMVQANPQILQPMLQELGKQNPQLLRLIQEHHAEFLQLINEPLEGSE
GDMFDQPDQEMPHAINVTPAEQEAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENA
GDFED
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaccgtgaagaccctcaagggcagccatttcgaaattagggttcagcccacc
gacaccgtgatgggtgttaagaagaacattgaggacatacaagggaaagataattaccca
tgtgggcagcagttgctcatacacaatgggaaagtgttgaaagatgaaactaccttggcc
gacaacaaggtctccgaagatggttttcttgttgtcatgctcagcaagagtaaaacttca
ggcttagtagggacttcatctgctcagcctgcttctacgattccacctacaactgcacca
atctccaattctactaccagagctgaagctcccgtacaagcaccgccctcagagagtacc
gtacctccttcagacacagctgatatgcatactgatacctatggtcaagctgcgtcaaac
tttgatcagactattcaacaaataatggatatgggtggtggaacttgggacagagaaaca
gttacacgtgcacttcgagcggcttataacaacccagagcgagcagtggactatttgtac
tctagcattccagaaaccgctgaagttccagtgcctgtggctcatttccctgcaagtcag
gcaactgaaacaggcattggtaatgctacacctgtctccggagcacctaattctgctccc
ctgaatatgtttccgcaggaagcattgtccggtgctggtgctggtgcacttggatccctt
gacttccttagaaacaatcatcagttccaaactttgcgctcaatggtgcaagccaaccca
caaattttacagcccatgctgcaggagcttggaaagcaaaacccccagcttttaagatta
attcaggagcaccatgccgagttccttcagttgataaatgaacctcttgagggttctgaa
ggtgacatgtttgatcagcctgatcaagaaatgccacatgctatcaatgtaactccagca
gaacaggaggccattgaacgacttgaggcaatgggatttgatagagccttggtgattgaa
gcatttttggcttgtgatcgcaatgaagaactggcagccaactatctattggagaatgct
ggggatttcgaagattga
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