Argentina anserina (silverweed cinquefoil): 126800988
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Entry
126800988 CDS
T10558
Name
(RefSeq) pre-mRNA-processing-splicing factor 8A
KO
K12856
pre-mRNA-processing factor 8
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126800988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aans03041
]
126800988
Spliceosome [BR:
aans03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
126800988
Complex C
U5 SnRNP specific factors
126800988
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
126800988
NCBI-ProteinID:
XP_050384377
LinkDB
All DBs
Position
6:complement(22692477..22702126)
Genome browser
AA seq
2345 aa
AA seq
DB search
MWNNGQIAPPGTGGSSIPPPPAAQPSYTVLPPPADAEAVLEEKARKWQQLNSKRYSDKRK
FGFVETQKEDMPPEHVRKIIRDHGDMSSKKFRHDKRVYLGALKFVPHAVYKLLENMPMPW
EQVRDVKVLYHITGAITFVNEIPWVVEPIYLAQWGSMWIMMRREKRDRRHFKRMRFPPFD
DEEPPLDYADNLLDVDPLEPIQLELDEEEDSAVYTWFYDHKPLVKTKLINGPSYRKWHLS
LPIMATLHRLAGQLLSDLIDRNYFYLFDMESFFTAKALNMCIPGGPKFEPLYRDMEKGDE
DWNEFNDINKLIIRSPLRTEYRIAFPHLYNNRPRKVKLCVYHTPMVMYIKTEDPDLPAFY
YDPLIHPIPSTNKERREKKIDEDDDIFILPEGVEPFLSNTQLYTDTTAAGVSLLFAPRPF
NMRSGRTRRAEDIPLVSEWYKEHCPPSYPVKVRVSYQKLLKCFVLNELHHRPPKAQKKKH
LFRSLQATKFFQTTELDWAEAGLQVCKQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLT
TKERKKSRFGNAFHLCREILRLTKLVVDANIQFRLGNVDAFQLADGLQYTFSHVGQLTGM
YRYKYRLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPMWRVWLFFLRGIVPLLERW
LGNLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDVLDAMPEGIKQNKARTILQ
HLSEAWRCWKANIPWKVPGLPVPIENMILRYVKSKADWWTNVAHYNRERIRRGATVDKTV
CRKNLGRLTRLWLKAEQERQHNYLKDGPYVTPEEAVAIYTTTVHWLESRKFSPIPFPPLS
YKHDTKLLILALERLKESYSVAVRLNQLQREELGLIEQAYDNPHEALSRIKRHLLTQRAF
KEVGIEFMDLYSYLIPVYEIEPLEKITDAYLDQYLWYEGDKRHLFPNWIKPADSEPPPLL
VYKWCQGINNLQNIWDTSDGQCVVMLQTKFEKFFEKIDLTMLNRLLRLVLDHNIADYVTA
KNNVVLSYKDMSHTNSYGLIRGLQFASFVVQYYGLVLDLLLLGLTRASEIAGPPQMPNEF
ITYWDTKVETRHPIRLYSRYIDKVHILFRFTHEEARDLIQRYLTEHPDPNNENMVGYNNK
KCWPRDARMRLMKHDVNLGRSVFWDMKNRLPRSITTLEWENSFVSVYSKDNPNLLFSMCG
FEVRILPKIRMSQEAFSNTRDGVWNLQNEQTKERTAVAFLRVDDEHLKIFENRVRQILMS
SGSTTFTKIVNKWNTALIGLMTYFREATVHTQELLDLLVKCENKIQTRIKIGLNSKMPSR
FPPVIFYTPKEIGGLGMLSMGHILIPQSDLRYSQQTDVGVTHFRSGMSHEEDQLIPNLYR
YIQPWESEFIDSQRVWAEYALKREEAQAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTL
AYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDVIQALGGVEGILEHTLF
KGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVG
FQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQVLDQELDALEIETVQ
KETIHPRKSYKMNSSCADILLFAAHRWPMSKPSLVAEPKDVFDQKASNKYWIDVQLRWGD
YDSHDIERYTRAKFMDYTTDNMSIYPSPTGVMIGLDLAYNLHSAFGNWFPGSKPLLQQAM
NKIMKSNPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGEIFSNQIIWFVDDTNVYRVTI
HKTFEGNLTTKPINGAIFIFNPRTGQLFLKVIHTSVWAGQKRLGQLAKWKTAEEVAALVR
SLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKIEKFGDLILKAT
EPQMVLFNIYDDWLKSISSYTAFSRLILILRALHVNNEKAKMLLKPDTTVITEPHHIWPS
LSDDQWMKVEVALRDLILSDYAKKNNVNTSALTQSEIRDIILGAEITPPSQQRQQIAEIE
KQHKEASQLTAVTTKTTNVHGDELIVTTTSPYEQAAFGSKTDWRVRAISATNLYLRVNHI
YVNSEDVKETGYTYIMPKNILKKFICVADLRTQISGYLYGVSPPDNPQVKEIRCIAMPPQ
WGTHQQVNLPTALPEHDFLNDLEPLGWMHTQPNELPQLSPQDLTSHAKILENTKQWDGEK
CIILTCSFTPGSCSLTAYKLTPSGYEWGRVNKDTGSNPHGYLPTHYEKVQMLLSDRFLGF
YMIPDNGPWNYNFMGVKHTQGMKYGIKLGTPREYYHEDHRPTHYLEFSNMEEGDTVAGDR
DDTFT
NT seq
7038 nt
NT seq
+upstream
nt +downstream
nt
atgtggaacaacggccagattgcgccgcccggcaccggtggctcgtcgattccgccacct
cccgcggctcagccgtcgtacacggtgttgccgcctccggcagatgccgaggctgtgctc
gaagagaaggctcgtaaatggcagcaactcaattccaagcggtacagcgacaagcgcaag
tttggcttcgtcgagacgcagaaggaggacatgcctccggagcatgtcaggaagattatt
agagaccatggggacatgtcctcgaagaaattccgtcatgataaacgtgtgtatctagga
gcacttaaatttgttccacacgctgtttacaagcttttggagaatatgccaatgccctgg
gagcaggttcgtgatgtcaaggttctgtaccatataactggcgcaattacatttgtgaat
gagataccttgggttgttgaacctatatatttggctcagtggggttcaatgtggattatg
atgagaagggagaagagggatcgtcgacattttaaaagaatgcggtttccaccgtttgat
gatgaggaacctccattagactatgctgataatctgttggatgttgatcctctagagcca
attcaactggagttagatgaagaagaagattctgctgtttatacctggttttatgaccat
aaacctctagtcaagacaaagctcattaatggtccaagttaccgcaaatggcatctctcg
cttcccatcatggcaactctccaccggcttgcaggacagctactttctgatttgattgac
cgcaattatttctatctgttcgacatggagtcattctttacagcaaaagctctcaatatg
tgcataccaggtgggcccaagttcgagccattgtaccgagatatggagaaaggggatgag
gactggaatgagtttaatgacattaacaagctgattattcggtctcctcttaggacagag
tacagaattgcattccctcatctctacaacaatagacccaggaaggtaaagctctgtgtg
tatcacacccccatggttatgtacataaaaactgaggatcctgatctacctgcgttttat
tatgatcccttgatacacccaatcccaagcacaaacaaggagcggcgcgaaaagaagatt
gatgaggatgatgacattttcatattgccggaaggggtggaaccatttttgagtaatact
cagctttatactgacacaacagcggctggagtttccctattgtttgcaccacgtcccttt
aacatgagatctgggcggactcgccgtgcagaagatataccccttgtgtcagagtggtat
aaagagcattgccctccatcctatccagttaaagttcgggtcagctaccagaaattgttg
aaatgttttgtgttgaacgaattgcatcatagaccacccaaggctcaaaagaagaagcac
ttgtttcggtcacttcaagctactaaattcttccaaactacggagcttgattgggctgaa
gcgggtctccaagtctgtaagcagggttataacatgctgaatctcttgatccacaggaag
aatttgaattaccttcatctggattataatttcaatctgaaacctgtgaaaaccctgaca
acaaaagagcgtaaaaagtcccggtttggtaatgcttttcatctttgccgtgagatcttg
cggttgacaaagctggtagttgatgctaacatccagttccgtttgggtaatgttgatgcc
tttcaattggctgatggcctgcagtacactttctctcatgttggtcagttgactggtatg
taccgttacaaatacaggttgatgcgtcagattagaatgtgcaaagatttgaagcatttg
atttactaccgcttcaacaccggcccagttgggaagggacctggatgtggattctgggct
ccaatgtggagggtctggttgttcttccttcgtggcatagttcctcttttggaacggtgg
ttgggaaacttacttgcacggcaatttgaagggcggcattcaaaaggagtggcaaagact
gtaactaagcagcgtgtggaaagtcattttgatttggagcttcgagctgctgtcatgcat
gatgttcttgatgcgatgcctgaggggatcaagcaaaataaggccagaactatactgcaa
catctcagtgaggcatggcgttgctggaaagcaaatatcccttggaaggtacctggtttg
ccagttcccattgaaaatatgattcttcgttacgtcaagtcaaaggcagactggtggact
aatgtggctcattacaatcgtgaacgtataagaagaggtgctacagtagataagacagtt
tgtcgaaagaatcttggaagattaactcgcctttggctgaaggcagagcaggaacgacag
cacaattatctgaaagatggcccatatgttacccccgaagaggcagttgcgatttacaca
acaactgtgcattggttggaatcgaggaagttcagccccatcccgtttcctccattgtcg
tacaagcatgataccaagctactcatccttgctctggagaggttgaaggaatcatatagt
gttgctgtcagattgaatcagcttcaaagggaagagctcggtcttattgaacaagcttat
gacaacccgcatgaagcattgtcacgaattaagcggcacttacttactcagcgtgccttc
aaagaagttggcatagagttcatggatctgtacagctatctcatcccagtctatgagatt
gaacctctggagaagattacagatgcttatcttgatcagtatctgtggtatgagggtgac
aaacgtcatctttttccgaactggatcaagcctgcagattccgagccgcctccactcttg
gtttataaatggtgtcaaggaattaacaatttacagaatatctgggatacaagtgatgga
cagtgtgttgtaatgctccagaccaagtttgagaagttctttgaaaagattgacttgacc
atgctgaataggcttctacgtttagttcttgatcataatattgctgattatgtcactgcg
aagaataatgtggtattgtcctacaaggatatgagtcatacaaattcttatggtcttatt
cgcggtcttcagtttgcatcttttgttgtacagtattatgggcttgtgttggatctattg
cttcttggattgactcgagccagtgagattgctggtccgccccaaatgccaaatgagttc
attacttattgggatacaaaggttgagacccgacatcctataaggctgtactcccgatac
atagacaaggtgcacatattgttccgcttcactcatgaggaagctcgagatcttatccag
cgatacctcactgaacatccagatcctaataatgagaatatggtggggtataataacaag
aagtgctggccaagagatgccagaatgaggctcatgaaacacgatgtcaatcttgggagg
agtgttttctgggatatgaaaaatcgtcttcctcgaagcatcacaactttagagtgggag
aacagctttgtttctgtgtacagcaaggataatccaaatttgcttttcagcatgtgtggt
tttgaggtcaggatacttcccaagataagaatgagccaagaggcattcagcaatacacga
gatggagtttggaatctgcagaatgaacagacaaaggaaaggactgcagttgctttctta
cgggttgatgatgagcacctgaaaatatttgagaatcgtgtaaggcagattcttatgtcg
tcaggttctaccacattcacaaagattgtcaacaaatggaatacagctctgatcggtctt
atgacttacttccgtgaagcaacagtacatacacaagaactgttggatctactagtcaag
tgcgaaaataaaattcagacacgtattaagattgggttgaattcaaagatgcctagtagg
tttccacctgtcatcttctacacaccaaaagaaattggaggacttggtatgttatcaatg
ggtcacatattgattccccaaagtgatctcagatacagtcagcagacagatgttggtgtg
acacactttaggagtgggatgagtcatgaagaggaccagctgattccaaatctgtatcgt
tacatacaaccttgggagagtgaattcattgattcccagcgtgtttgggcagaatatgcc
ctgaaaagggaggaggctcaagcacaaaacaggcgtctaacccttgaagatctggaagat
tcatgggataggggaattccacgtattaatacattgttccagaaggaccggcacacttta
gcatatgacaaaggatggagagttcgtactgattttaagcagtaccaggtcttgaaacaa
aatcctttttggtggacacaccaaaggcatgacggaaagctttggaacttgaataactac
agaactgatgttattcaagctcttggaggtgtagaaggaatcctggagcataccttattc
aagggaacttacttccccacttgggagggtctcttctgggaaaaagcatctggttttgag
gaatcaatgaagtacaagaagctgactaatgcacagagatctgggcttaatcaaattcct
aatcgtaggttcacactctggtggtcgccaaccattaatcgggctaatgtgtatgttggt
ttccaagtgcagttagatttgactgggatctttatgcatggaaagatcccgaccttgaag
atatccttgattcaaatctttcgtgcacatttgtggcaaaagatccacgaaagtgttgtc
atggatctctgtcaggttttggatcaggagttggatgctttggaaatcgagaccgtgcag
aaggaaacaattcatcccaggaagagttacaagatgaacagttcttgtgctgatattctg
ctctttgctgcccatagatggccgatgtcaaaacctagtcttgtggcagagccgaaggat
gtgtttgatcagaaagcaagcaacaagtactggatagatgtacaactccgatggggagac
tatgattcccacgatattgaacgttacacccgagccaagttcatggattatacaacagac
aacatgtctatctacccctcccccacaggggtgatgattggtcttgatctggcgtataat
ctacattctgcttttggtaattggtttcctggatccaaaccgctgcttcaacaggcaatg
aacaaaataatgaagtcaaatccagctctttatgtcttgcgggagcggatacggaaagga
ttgcagctttactcttcagagccgacagaaccttacttgtcatcccagaattatggggag
attttcagcaatcaaattatctggtttgttgatgatactaatgtgtatcgcgttacaatc
cacaagacatttgaaggaaatctcactacaaagccaattaatggtgcgattttcatattc
aatccaaggaccgggcagctgttcctgaaggtcatccacacaagtgtatgggcaggacag
aagcgtcttggtcagttggctaagtggaagactgcagaagaagttgctgcacttgtgcgt
tctttaccagttgaagagcagccaaagcaaattattgtgactcgaaagggaatgcttgat
ccactagaggtgcacttgttggatttccccaacatagtcataaaaggaagtgagctgcag
cttccgttccaggcttgtcttaagattgagaaattcggtgatctgatactgaaggctact
gagccacagatggttcttttcaacatctatgatgattggttgaagagtatttcatcatat
actgcattctctcggctcattttgattcttcgtgcacttcatgtaaataatgagaaggca
aagatgttattgaaacctgatacaacggtcatcactgagccacaccacatttggccttcc
ctttctgacgatcaatggatgaaggttgaggttgctttaagggatctgattctctcagat
tatgcaaaaaagaacaacgtgaacacatctgctctgacacaatctgagattcgtgatatc
attcttggagctgagattactcctccttcacaacaaaggcaacaaattgcagagattgag
aagcagcataaagaagcaagtcagctgacagcagttactacgaagactacgaatgtgcat
ggtgatgaactcattgtcactactactagtccttatgagcaagctgcatttgggtccaag
actgattggcgtgtgagagcaatatctgctaccaatctctaccttcgtgtcaatcatata
tatgtgaattcagaagatgtaaaggaaacgggttacacatatatcatgccaaagaacata
ttgaagaagttcatctgtgttgcggatctgcggacacaaatttctggttacttgtacggt
gtaagcccacctgacaatcctcaggtcaaggaaattcgctgcattgctatgccacctcag
tggggaacccaccagcaagttaatcttccaacggcgcttcccgagcatgattttctcaat
gatctggaacctttggggtggatgcacacacagccgaatgaacttccacagctttctcct
caggatctaacctctcatgctaagatcttggagaacaccaagcaatgggatggggaaaag
tgcatcattttaacctgcagtttcactcctggttcctgctcgttaactgcatacaaactt
actccatctggttatgagtggggacgtgtcaacaaagacacaggaagcaatccacacggt
taccttccaactcattatgagaaggtccaaatgcttctcagtgacaggttccttggtttc
tatatgattcctgataatggtccgtggaactacaacttcatgggggtgaagcatacacaa
ggcatgaagtacggtatcaagcttgggacaccaagggagtactatcacgaggaccatagg
ccaacacattaccttgagtttagcaacatggaggagggtgacacagtggcgggagatcgt
gatgatacctttacataa
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integrated database retrieval system
