Argentina anserina (silverweed cinquefoil): 126801009
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Entry
126801009 CDS
T10558
Name
(RefSeq) coatomer subunit beta-1-like isoform X1
KO
K17301
coatomer subunit beta
Organism
aans Argentina anserina (silverweed cinquefoil)
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aans04131
]
126801009
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aans04147
]
126801009
Membrane trafficking [BR:
aans04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
126801009
Exosome [BR:
aans04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
126801009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
Cnd1
HEAT_2
HEAT
INTS1_R4
Clathrin
Coatomer_g_Cpla
Alpha_adaptinC2
Motif
Other DBs
NCBI-GeneID:
126801009
NCBI-ProteinID:
XP_050384401
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All DBs
Position
6:28823394..28835705
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AA seq
953 aa
AA seq
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MTEKSCTLLVHFDKGTPALANEIKGALEGNDVEAKIEALKQAIMLLLNGDTIPHLFITII
RYVLPSEDHTVQKLLLLYLEIIDKTDSRGKVLPEMILICQNLRNNLQSPNEYIRGVTLRF
LCRLNESEIIEPLMPSILANLEHRHPFVRRNAVSAVMYVYKLPQGEQLLVDAPEIIERFL
TSEQDQSSKRNAFLMLFNCAQDRAVSYLFSNIERIIDWSEQLQLVVLELIRKVCRVNKSE
KGKYIKVIISLLNAQSSAVVYECANTLVSLSSAPTAVRAAANTYCQLLLSQSDNNVKLIV
LDRINELKASHREILVELVMDVLRALSSPNPDIRRKTLDIVLDLITPGNIDEVVMMLKKE
VVKTQGAELEKNGEYRQMLVQAIYSCAVKFPEVASTVVHPLMDFLGDSNVASATDVAIFV
REIIETNPKLRVSIITRLLDTFYQIRSSRVCTYALWIIGEYCLSLSEVESGIATIKQCLG
ELPFYTASEETEAQDVSRNTHTQVMNSSTVSSRRPVVLADGTYATQSAALETAMSAPVLV
QGSLASVGNLRSLILSGDFFLESVVACTLTKLVLRLEEVQPSKVEVNKVTAQALLFMVSM
LQLGQSPVLPHPIDNDSHDRIVLCIRLLCNKGEELKKIWLKSCRESFVTMLEDKKHREIQ
ESKAMAQISNAQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKRATGEFIKDGDDANRLNR
ILQLTGFSDPVYAEAYVTVNHYDIALDVTIINRTKATLQNLCLELATMGDLKLVERPQNY
TLAPESTKQIKANIKVSSTETGVIFGNIVYETSSNSLERTVIVLNDIHIDIMDYISPASC
ADVLFRTMWAEFEWENKVSVNTVIEDEKEFLNHIVKATNMKCLTPPSALEGECGVLAANL
YARSVFGEDALVNVSVEKQADGKLGGYIRIRSKTQGIALSLGDKFTLKQKGGF
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgacggagaagtcatgcactctcctggtccatttcgacaagggcacgccggccctcgcc
aacgagatcaagggagctctcgaaggcaacgacgtcgaggccaagatcgaagccctcaag
caagccatcatgctcctcctcaacggcgacaccatcccccacctcttcatcaccatcatc
cgctacgtcctcccctccgaggaccacaccgtccagaagctcctcctcctctacctcgag
atcatcgacaagaccgattcccgcggcaaggtcctcccggagatgatcctcatctgccag
aacctccgcaacaacctccagagccccaacgagtacatccgcggcgtcactctccgtttc
ctctgccgcttgaacgagtccgagatcatcgagcctttgatgccttcgattctggccaat
ctggagcaccggcatccgtttgtgcggcgcaacgccgtcagcgccgtcatgtatgtgtat
aagcttccgcagggcgagcagttactggtggacgcgccggagatcatcgagcggttcttg
acctccgagcaggatcagtctagtaagcgaaacgctttccttatgctgtttaattgtgct
caggatagagctgttagttatttgttttcgaatatcgaaaggattattgattggagtgag
cagctacaattggttgtgttggagttgattaggaaggtctgtagagtcaataagagtgag
aaggggaagtacattaaggttattatatcattgcttaatgctcagtccagtgccgtcgtt
tacgagtgtgccaatacactcgtgtcgctgtcgtctgcgccgactgcggttcgtgctgcg
gccaatacttactgtcagttgttgctgtcgcagagcgacaacaatgtgaagttgattgtg
ctggataggataaatgagcttaaggcttcacatcgggagatattggtggagttggttatg
gatgtgctcagggctctctcaagtccaaatcctgatatcaggaggaagacgcttgatatt
gtgcttgacttgattactcctgggaatattgatgaggttgtgatgatgttgaagaaggag
gtcgtcaagactcagggtgctgagcttgagaagaatggggagtacaggcagatgctggtg
caggctatatattcgtgtgcagttaagtttcctgaggtggcaagcacggtggtccatcct
ttgatggatttcttgggcgactccaatgtggcttcagctacggatgtggctatttttgtg
cgtgagattattgaaaccaaccccaagttgcgtgtgtctattattacaaggctgttggat
actttttatcagataaggtcttcaagggtgtgtacttatgctctttggattatcggggaa
tattgcctgtcactttctgaggttgaaagtgggattgcaaccattaagcagtgtcttggg
gagctcccgttttacacagcttctgaggagactgaggcacaagatgtttctaggaatact
catactcaggtgatgaactcttctactgtgtcttccaggagacctgtagtccttgcagat
ggtacatatgctacccagtctgctgcactggaaactgcgatgtctgctcctgtccttgtt
caaggatccttggcttctgtagggaacttgagatcactgattctttcaggtgactttttc
ctggagtcagttgttgcttgcacgttaacaaagcttgttttgagactggaagaggtccag
ccttctaaagttgaagttaacaaggtaaccgcacaggctttgttgttcatggtgtctatg
ctacaactgggtcaatcaccggtccttccacatcctattgataatgattctcatgaccga
attgttctttgcattcgattgttatgcaataaaggtgaagaactgaaaaagatatggcta
aagtcttgtagagaaagttttgttacaatgcttgaagataagaagcatcgggaaatacag
gaaagtaaagctatggcccagatatcaaatgcgcaacccgatgatcttattgatttctac
catcttaagagtcgaaagggtatgagccagcttgagttggaagatgaggttcaagatgat
ctcaaacgtgctactggagagtttataaaggatggagatgatgcaaacagactcaaccgc
attcttcagctaacaggattcagcgatcctgtttatgctgaagcctatgttacagttaat
cattatgatattgctcttgatgttaccatcatcaaccgaaccaaggcaacccttcaaaat
ttgtgcttggagttggccacgatgggcgatctcaaactagtggagcgtcctcagaactat
acactagctccggaatcaactaaacagataaaagcaaacatcaaggtctcttcaactgaa
acaggagttatatttggtaacattgtttatgagacatcttcaaattcgcttgagagaaca
gttatagttcttaatgacatccatattgatataatggattacatctctccggcttcatgt
gctgatgtgttatttcgaacaatgtgggccgagtttgaatgggaaaataaggtttctgta
aatactgttattgaagatgaaaaggaatttttgaaccacattgttaaagcaactaacatg
aagtgcctgactccaccatcggccctggaaggagagtgtggagtcctggctgccaatctg
tatgcgaggagtgttttcggggaggatgctttggtgaatgtgagtgttgagaaacaagca
gatggtaagctaggtggatacattagaatcagaagcaagactcaaggtattgcactgagt
cttggcgacaagttcaccttgaaacagaagggtggtttttga
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