Argentina anserina (silverweed cinquefoil): 126801024
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Entry
126801024 CDS
T10558
Name
(RefSeq) transcription factor bHLH140
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans03410
Base excision repair
Brite
Enzymes [BR:
aans01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
126801024
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
126801024
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
126801024
DNA repair and recombination proteins [BR:
aans03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
126801024
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
126801024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
126801024
NCBI-ProteinID:
XP_050384429
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Position
6:5685099..5688637
Genome browser
AA seq
756 aa
AA seq
DB search
MDTDVDEPTKGEEQTHAKPIMVILMGAPGSGKSAFCERVMGSSVRPWVRVCQDTIKNGKA
GTKAQCIESARSALREGKSVFIDRCNLEKEQRDEFVKLGGGQVDVHAVVLDLPAKICISR
SVKRTGHEGNLQGGKAAAVVNRMLQKKELPKLSEGYGRITFCQNESDVEAAIGTYSGLGP
LDMLPHGSFGQKNPGGKVQLGIMKFLKKKEAPANTESTSKKVQDSDASIYTAGQDTSLKG
TGLFTERANMESNKDEQPVVGSAVIDVSLHDAPTLAFPSISTAGFQFDLEKASDIIVEKV
EEFVYKLGNARLVLVDVSHKSKILSLVRAKASQKNIDPNRFYTFVGDITKLHSEGGLCCN
VIANAANWRLKSGGGGVNAAIFNAGGPALELATKEKAKSLYPGNAVVVPLPSTSPLCCRE
GVTHVIHVVGPNMNPQKPNYLANDYSKGCKILRDTYTALFEGFASIVRTQKKISKGSIEN
LELKLSELEDHSENGPTNHSTISYQKIKREDLHESDRNKRSKGYQDEAENVSDSYTGKSN
LKSDGGKKKSRGSWAQALYNIAMHPDKQKDVVLEISDDVIVLNDLYPKAQKHLLVVARHP
GLDRLADVCKEHIQLLRTMHVVGLKWAESFLHDDSALVFRLGYHSEPSMRQLHLHVISQD
FNSTHLKNKKHWNSFNTAFFRDSIDVLEEVSSDGKAILNDDDSLMSMELRCNRCRSAHPT
IPKLKLHIARCQASFPSILLQNGRLITVPSNSSAAP
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atggacacggacgttgatgaacccacaaaaggcgaagaacaaacccatgcgaagcccata
atggtgatcctgatgggcgcacccggcagcggcaagtccgcattctgcgaacgagtcatg
ggctcctccgttcgtccctgggtccgcgtctgccaggatactattaaaaatgggaaggcc
gggactaaagcgcagtgtatagagagtgcgaggagcgcgttgagggaaggaaagagtgtg
tttatagataggtgcaatctagagaaggagcaaagagatgagtttgtgaagctggggggt
ggtcaagtcgatgttcatgcagtggtgcttgatcttcctgctaagatttgtatatcacgg
tcggtgaagcgaactggacatgaggggaacttgcaaggagggaaggctgcggcggttgtg
aatagaatgttgcagaagaaagagctgccgaagctgagtgaagggtatggtaggatcact
ttttgccagaatgagagtgatgttgaagctgcaattggtacgtatagtggactcggtccg
ttggatatgcttccacatgggagttttggacagaagaacccgggtgggaaagttcaactt
ggtataatgaagttcttaaagaaaaaagaggctcctgctaatactgaatcgacttcaaag
aaggttcaggattctgatgcctctatatataccgcgggacaggataccagtttgaaggga
actggcttgtttactgaaagagctaatatggagtccaataaagatgaacagcctgttgta
gggtctgctgttattgatgtctctcttcatgatgctcccaccctagcatttccatctatt
tccacagcaggttttcagtttgaccttgagaaggcatctgacattattgtagagaaagtt
gaggaatttgtttataaacttggaaatgctagacttgttttagtagacgtgagtcataaa
tcgaagatattgtccttggtgagggctaaagcttcacaaaagaacatcgaccccaacaga
ttctacacatttgtaggagacatcactaagcttcattcagaaggaggtctttgctgcaat
gtgatagctaacgctgctaattggcgacttaaatcaggaggtggtggtgtcaatgcagca
atcttcaatgctggaggtccagccttagagcttgcaaccaaagaaaaagccaaatcttta
tacccggggaatgctgttgttgttcctctcccttcaacttctcccctgtgttgtagggaa
ggagtaacacatgtgatacatgttgttggacccaatatgaacccacagaaaccaaattat
cttgccaatgattatagtaaaggctgcaagattctgcgggacacttatacagcactattt
gaaggttttgcatccatcgtaaggacccaaaagaagatatctaagggtagcattgaaaac
cttgagttgaagctgtcagagttagaagatcactcagagaatgggcctacaaatcactct
acaattagctatcaaaagatcaagagagaggatctccatgaatctgacaggaacaaacgg
agtaaaggatatcaagatgaagctgaaaatgtctctgattcttatactggtaaatcaaat
ctcaagtctgatggaggcaagaagaagtcccggggatcatgggctcaggctctctacaac
attgccatgcatccagataagcagaaggatgtagtcctagagatatcagatgatgttatt
gtactgaatgatctttatccaaaggcgcaaaagcatcttctagtggtagcgcgacatcct
ggtcttgatcgcttggcagatgtatgcaaagaacacattcagttgctaagaacaatgcat
gtggttggtttgaagtgggctgaaagtttcttgcatgatgattcagcattggtctttcgt
cttggatatcactcggaaccatcaatgcgacagcttcatctacatgttatcagccaggat
tttaattcaacgcatttgaagaacaagaaacattggaactcgtttaatactgctttcttt
cgagactccattgatgtgctagaggaagttagtagtgacggaaaggcgatactgaatgat
gatgacagcctgatgtctatggagttacgatgtaaccgatgtagaagtgctcaccccacc
atacccaaactaaaactgcacattgcccgatgtcaagcctccttcccaagcatcctgctt
caaaacggtcgtctgattacagtaccaagcaattctagcgctgctccatag
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