Argentina anserina (silverweed cinquefoil): 126801031
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Entry
126801031 CDS
T10558
Name
(RefSeq) ubiquitin receptor RAD23d
KO
K10839
UV excision repair protein RAD23
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans03420
Nucleotide excision repair
aans04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
126801031
09124 Replication and repair
03420 Nucleotide excision repair
126801031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
aans03051
]
126801031
03400 DNA repair and recombination proteins [BR:
aans03400
]
126801031
Proteasome [BR:
aans03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
126801031
DNA repair and recombination proteins [BR:
aans03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
126801031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
UBA_7
CUE
UBA_RAD5A
Dsc3_N
Rad60-SLD_2
TECR_N
UBA_3
Motif
Other DBs
NCBI-GeneID:
126801031
NCBI-ProteinID:
XP_050384436
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Position
6:complement(33199614..33204104)
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AA seq
385 aa
AA seq
DB search
MKVFVKTLKGTNFEIEVDPKQLVADVKQIIEKAQGADVYPASKQMLIHQGKVLKDATTLE
ENQVAENSFIVIMLSKASPSGSSSTQSAPKSQVQPASTPSSATPPAAAPAPTSAVAPSQP
VVETSAVVAPSDSSVTDVYGQAASNLVAGNSLEATVQQILDMGGGSWDRDTVLRALRAAF
NNPERAVEYLYSGIPEQAEVPPAAPIPVGEQVMNSPAINPPTQAPQAAAPTSGPNANPLD
LFPQGVPSVGANAGAGNLDFLRNSPQFQALRTMVQANPQILQPMLLELGKQNPNLMQLIQ
AHQADFLRLINEPVEGGAEGNILGQLGSAAMPQAVTVTAEEREAIERLEAMGFDRALVLE
VYFACNKNEELAANYLLDHMHEFEE
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtttttgtcaagactttgaaaggcaccaacttcgagatcgaagtcgaccccaaa
cagttggttgctgatgtgaagcaaattatagagaaggcacagggagcagatgtgtacccg
gcctcgaaacagatgcttattcaccaggggaaagttcttaaggatgccacaactttagaa
gaaaatcaagtcgcggaaaacagcttcattgtgataatgttgagcaaggcttcaccgagt
ggaagctccagtacccaaagtgcccccaaaagtcaggttcaacctgcaagtactcctagc
tcggcgacaccaccagcagcagctccagctccaacctcagctgtggcaccgtcacaacct
gttgttgaaacttctgctgttgtagctccatctgattcttcagtaactgatgtgtatggg
caagctgcatcaaatcttgttgcaggaaatagtttagaagctaccgttcaacagattcta
gatatgggtggaggaagttgggatagggataccgttcttcgtgctttacgtgctgcattt
aacaaccctgaaagggctgttgaatatttatattcaggaattcctgagcaagctgaagta
cctccagctgccccaattcctgttggtgaacaggtaatgaattctccggcaataaatcct
cccacccaggctccacaagcagcagctcctaccagtggtcccaatgcaaacccgctggat
ctatttccacagggcgttcctagtgttggtgcaaacgccggagcaggcaatttggatttt
ctgcgaaacagtccgcagtttcaagctttgagaactatggtgcaagcaaacccgcaaatt
ctccagcctatgctccttgagttgggaaaacaaaatccaaatttaatgcagctcattcaa
gcccatcaagctgatttcttacgcttgataaatgagcctgttgaggggggtgctgaaggg
aacattttgggtcagttgggttcagcggcaatgccacaggcagtgacggtcacggcagag
gagagagaggccattgaacgtcttgaagctatgggtttcgatcgagccctagtattggag
gtatactttgcttgcaataagaatgaggagctggcggcaaactatcttttggaccacatg
catgaatttgaggaatga
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