Argentina anserina (silverweed cinquefoil): 126801215
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Entry
126801215 CDS
T10558
Name
(RefSeq) probable ubiquitin conjugation factor E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans04120
Ubiquitin mediated proteolysis
aans04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
126801215
04120 Ubiquitin mediated proteolysis
126801215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aans04121
]
126801215
Enzymes [BR:
aans01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126801215
Ubiquitin system [BR:
aans04121
]
Ubiquitin ligases (E3)
U-box type E3
126801215
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
126801215
NCBI-ProteinID:
XP_050384650
LinkDB
All DBs
Position
6:34438512..34444329
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AA seq
1032 aa
AA seq
DB search
MATPKPQRSKEEVEDIILRKIFQVTLTEPPPTADPKSPVVYLEMTAAEILSEGKPMRLTR
DLMESILIDRLMGNFSAAAEPPFQYLVGCYRRAHDESRKITAMKDKNIKADMESLTKQAK
KLSVSYCRIHLGNPDSFPSSGSDPATGSPLLPLLFSEVASSVGGFGSGSTSSGAQCPPGF
LDEFFKDADFDTLDPIFKALYEELREIVLKVSALGNFAQPLRALLYLVSIPAGAKSLVNH
PWWIPKGVYLNGRVIERTSILGPFFHVSALPDHPIFKSQPDVGQQCFSENTKESEMRISY
TTIKTYMNDLYEGLAEVLRTLLKNPETRENVLEYLAEVINKNSSRAHIQVDPLSCASSGM
FVNLSAVMLRLCEPFLDVNLSKRDRIDPKYVFYGNRLELRGLTALHASSEEVTEWINKDS
LGNAGGDGQNRLTQSQEATSSGTNISQPSNVKLGGQKSKYTFICECFFMTARVLNLGLLK
AFSDYKHLVQDMQRSEDTLKALKNQAPSPQLKIDIARLEKELELYKQEKRCHEAQILTDE
PLLERALSFYRLMVVWLVRLVGGFKMPLPSTCPVELASMPEHFVEDAMELLIFASRMPKA
FHGIMLDEFMNFIIMFMASPEYIRNPYLRAKMVEVLTCLMPRPGHQPTAVTAAATSLFEG
HQLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHQNAWKQIAR
EEEKGVYLNFLNFLINDSIYLLDESLNKILEHKELEAEMSNTAEWERRPAQERQERTRLF
RSQENIIRIDMKLANEDVSMLAFTTEQITAPFLLAEMVERVASMLNYFLLQLVGPQRKSL
SLKDPEKYEFRPKQLLKQIVYIYVHLARGDKENIFPAAISKDGRSYNEQLFSAAADVLIR
IGEDGKVIQEFIELGSKAKVAASEAMDVEAVLGDIPDEFLDPIQYTLMKDPVILPSSRMT
VDRPVIQRHLLSDSSDPFNRSHLTADMLIPDDELKAKIQDFIRSQELKRRESLSMQSDKA
TIHTTSSEMLID
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atggccaccccaaaaccccagaggtccaaggaggaggtggaagacatcatcctccgcaaa
atcttccaggtcaccctgacggagccgccgccgaccgccgaccccaaatcccccgtcgtc
tacctcgagatgaccgccgccgagattctcagcgagggcaagccgatgaggctcacgcgc
gacctcatggagtcgatcctcatcgaccgcctcatgggcaacttctccgccgccgccgag
ccgccgttccagtacctcgtcggctgctaccgccgcgcccacgacgagagccgcaagatc
accgccatgaaagacaagaacatcaaggccgacatggagtccctcaccaaacaagccaaa
aagctctcggtctcctactgcaggatccatttgggcaacccggactcgtttccgagctcg
ggttcggatccggcaaccgggtcgccgttactgccgttgctcttttctgaagtggcgagc
tcggtgggcggtttcggtagtggctccactagtagtggggcccagtgtcctccgggtttt
ttggatgagttttttaaggacgcggatttcgataccttggacccgatttttaaggcgctg
tatgaagagctgagggagattgttcttaaggtttcggcgttggggaactttgctcagccg
ttgagggctttgttgtacttggttagcattccggctggggctaagagtctggtgaatcac
ccgtggtggattccgaaaggggtttacttgaatgggagggttattgagaggactagtatt
ttgggcccttttttccatgttagtgcattgcctgatcatcctattttcaagagccagccc
gatgtcgggcagcagtgtttttcagagaacactaaggaaagtgagatgcggatttcgtac
accacgataaagacatatatgaatgatttatatgaaggccttgcggaagttctccgcaca
ctattaaaaaatccggagactcgtgagaatgttcttgagtatcttgctgaggttatcaac
aaaaactcatcaagggctcatattcaggtcgatcctctctcttgtgcgagttctggcatg
tttgtcaatctcagtgctgtcatgctgcgactttgcgagccatttctggatgtaaattta
agtaaaagggacagaatcgacccaaaatatgtattctatggtaaccgtttggagttaaga
ggtttgactgctctgcatgcatcatctgaagaagttactgaatggatcaacaaagatagt
ctagggaatgctggtggtgatggtcaaaatcgtcttacacaatcccaagaagccaccagt
tctggcactaatatctctcaaccttctaatgtgaagctgggcggccaaaaatcaaaatat
acatttatatgtgaatgcttcttcatgactgcaagggtgcttaatctgggtttattgaaa
gcattttctgactataagcatctagtacaggacatgcagaggtctgaagatacactaaaa
gccttaaaaaaccaggcgccttctcctcaattgaagattgatatagctcgccttgagaaa
gaattagagttgtataaacaggaaaagcgttgtcatgaagctcaaatacttacggatgaa
ccactcttagagagggctctttcattctaccggttgatggtggtatggctggttcgcttg
gttggtggatttaaaatgcctctgccatcaacttgccctgttgaacttgcatctatgcca
gaacattttgtggaagatgcaatggagttgcttatatttgcttcgcggatgccaaaagca
tttcatgggatcatgttggatgaatttatgaacttcattataatgttcatggcaagtcca
gaatatatccggaatccatatctaagagcaaagatggttgaagtcctgacctgcttgatg
cctcgtccaggtcatcaaccaactgctgtcacagctgctgctacgagcttgttcgaaggg
caccaactgtctctcgagtatcttgtgaggaatctcttgaaactctatgtcgacattgag
tttactggttctcatacacagttctatgacaagtttaacatccgccataatattgccgaa
cttcttgaatatctttggcaagtccccagtcatcagaatgcatggaaacagattgctagg
gaagaggagaaaggcgtatatttgaatttcttgaacttcttgatcaatgatagtatatat
cttctggatgaaagtcttaacaagattcttgagcacaaagaactggaagctgagatgtca
aacactgcagaatgggagcgtagacctgctcaagagaggcaggagagaacccgcctgttc
cgctctcaagaaaatatcattcgaattgatatgaagttagcgaatgaagatgtgagtatg
ttggcatttactacagaacaaattacagctccttttctacttgctgagatggtcgaaagg
gtggcaagcatgctcaattactttttgttgcaattagtaggtcctcaaaggaaatctctt
agtctgaaagaccctgagaagtatgagttccgtccaaagcaattgcttaagcagattgtg
tatatttatgttcatctagcaagaggtgataaggaaaatatcttcccagctgccatctca
aaggatggccgatcttacaatgagcagttgtttagtgctgctgcagatgtcctaataaga
attggtgaagatgggaaggtcatacaggagttcattgagctcggttcaaaagccaaggtt
gctgcatctgaggccatggacgtcgaagctgttcttggggatatacctgatgaattcctt
gacccaattcagtacactttgatgaaggatccagttatcttaccgtcttcaagaatgacg
gtagaccgacccgtcatacaaaggcatctccttagcgatagtagtgatccattcaatcgt
tcccatcttactgcggacatgttgataccagatgatgaattgaaggcaaaaatacaagac
tttattaggtcgcaagagttgaagcgcagggaaagcctgagcatgcagagcgacaaggca
acaatacacaccacatctagtgaaatgctaattgattag
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