Argentina anserina (silverweed cinquefoil): 126801225
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Entry
126801225 CDS
T10558
Name
(RefSeq) ABC transporter A family member 1 isoform X1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
126801225
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aans02000
]
126801225
Transporters [BR:
aans02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
126801225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane_3
ABC_tran
AAA_21
R1_ABCA1
SMC_N
AAA_29
RsgA_GTPase
AAA_22
Motif
Other DBs
NCBI-GeneID:
126801225
NCBI-ProteinID:
XP_050384663
LinkDB
All DBs
Position
6:16025730..16049012
Genome browser
AA seq
1874 aa
AA seq
DB search
MGTGARQLKAMLRKNWLLKIRHPYVTCAEILLPTVVMLMLIAVRTRVDTQIHPSQPYIRK
DMLVEVGKGTSPNFQQVLQLLLKKEEILAFVPDTKATRSMINMMSIIFPLLQRVSRIYKD
EEELEAYIRSDLYGTCNQIMNCPNPKIKGAVVFHNQGPQLFDYSIRLNHTWAFSGFPDVK
SIMDTNGPYFNDLELGVNTVPTMQYSFSGFLTLQQVLDSFLIFAAQHTKNITLSSLQAPW
TQYGPSNIRIVPFPTREYTDDEFQSIIKSVMGVLYLLGFLYPISRLISYSVFEKEQKIRE
GLYMMGLKDGVFHLSWFIAYALQFAVSSLIITVCTMDNLFKYSDKSVVFIYFFFFGVSAI
MLSFLISTFFERAKTAVAVGTLAFLSAFFPYYSVNDEAVPMILKVIASLLSPTAFALGSV
NFADYERAHVGLRWSNIWRASSGVNFSVCLLMMLLDALLYCVIGLYLDKVLPRENGVRYP
WNFIFQKWFWKTPDINKYHKSSLGVHIRDKVSENAIFSGKENTKAAVEAINFDMRQQELD
HRCIQIRNLHKVYASKKGKCCAVNSLQLTMYENQILALLGHNGAGKSTTISMLVGLLRPT
SGDAVVFGKNIITDMEEIRKELGVCPQHDILFPELTVKEHLEIFAILKGVQEDFVNSVVV
DMVDQVGLADKMNTTVMALSGGMKRKLSLGIALIGNSKVIILDEPTSGMDPYSMRLTWQL
IKKIRKGRIVLLTTHSMDEAEALGDRIAIMANGSLKCCGSSLFLKHQYGVGYTLTLVKSA
PTASMAADIVYRHIPSATCVSEVGTEISFKLPLASSSSFESMFREIESCMRSSKLNVGTS
SVEKDYIGIESYGISVTTLEEVFLRVAGCDYDEAARFDQKEGLLCPESQTSHDPTQKQIF
HSKKSFAYYKEILGVLFTMVGRVCGLIFATVFSCFNFLGVQCCGCCIISRSTFWRHSKAL
FIKRAISARRDRKTIVFQLVIPAVFLLFGLLLLKLKPHPDQQSVTFTTSHFNPLLRGGGG
GGPIPFDLSWPIAQKVAEHIEGGWIQTFKPSGYKFPNSEKALHDAIEAAGETLGPVLLSM
SEFLMSSFNESYQSRYGAVVMDDQNDDGSLGYTVLHNSSCQHAAPTYINLMNTAILRLAS
RDKNMTIQTRNHPLPMTQSQHLQRHDLDAFSAAVIVSIAFSFIPASFAVPIVKEREVKAK
HQQLISGVSILSYWTSAYIWDFISFLFPSSFAIILFYIFGLDQFIGKGCLLSTIVMFLAY
GLAIASSTYCLTFFFSDHTMAQNVVLLVHFFTGLILMVISFIMGLIKTTASANSFLKNFF
RLSPGFCFADGLASLALLRQDMKNKSSNKAFDWNVTGGSICYLGIESICYFLLALGLEIL
PFNKLTPTTLKEWWKSRKSIDPDTSSYREPLLTSSAESVTVDLDEDTDVKTERSRVLSGA
IDNAIIYLCNLRKVYPGGQPHATKVAVHSLTFSVQEGECFGFLGTNGAGKTTTLSMLTGE
EYPTDGSAYIFGKDICSKPKAARQYIGFCPQFDALLEYLTVQEHLELYATIKGVPDFKIN
EVVMEKLMEFDLLKHASKPSFSLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRF
MWEVISRLSTRRGKTAVILTTHSMNEAQALCTRIGIMVGGQLMCIGSPQHLKTRFGNHLE
LEVKPIEVSSMDLDKLCRVIQERLSHVPSHPRSLLDGLEVCIGATDSIVAENASVAEISL
SREMIIMIGRWLGNEERIKPLICPTPLSDGVLGEQLFEQLDRDGGIPLLIFSEWWLSSEK
FSAIDSFVLSSFPGAMFQGMNGLSVKYQLPCGPDLSLADVFGHLERKRNRLGIAEYSISQ
STLETIFNHFAASP
NT seq
5625 nt
NT seq
+upstream
nt +downstream
nt
atggggaccggagccagacagctcaaggctatgctccgcaagaattggctcctcaagata
cgtcacccttacgtcacctgcgctgagatattactccctacggtagtcatgttgatgctc
atagctgtaaggacacgtgtcgatacgcagattcacccttcacagccgtatatcagaaaa
gatatgttggtggaagtgggcaaaggaacatcccctaattttcaacaagttttgcagtta
ctattgaaaaaagaagagattttggcttttgttccagatacaaaagcgacaaggtcaatg
attaacatgatgtcgattatatttcctctcttgcagcgtgtttctagaatttacaaagat
gaggaggagctggaagcctatatacgctcagatctctatggtacctgcaatcaaatcatg
aactgcccaaacccaaaaatcaaaggagcagtagtatttcacaatcagggtcctcaactc
ttcgattatagtatacgtctgaatcacacttgggctttctctggatttcctgatgttaaa
tcgatcatggacacaaatggtccttatttcaatgacttggaattgggtgtgaatactgta
ccgacaatgcagtacagcttcagtggatttctaactctccagcaagtactagattctttc
ctaatttttgcggcccagcatactaaaaacatcacactttcctctctgcaagctccatgg
acgcaatatggtccgtcgaacattcgtatcgttccgtttccaacacgtgaatacactgat
gatgagttccagtccatcataaaaagtgtgatgggtgtattgtatctcttgggatttctc
tatccaatttcacgcttgatcagttattctgtctttgagaaggaacaaaagataagagaa
ggtctttatatgatggggctgaaagacggggtattccatctatcgtggttcattgcatat
gctttgcagtttgctgtttcctctctaattatcacagtttgcacgatggataaccttttc
aagtatagtgacaagtccgtggtgttcatttacttcttctttttcggagtaagcgcgatt
atgctgtcatttttaatctctacgttcttcgaacgagctaagacagctgttgccgttggg
acccttgctttcctgagtgcttttttcccttactactctgttaatgacgaggctgttcct
atgattcttaaggtgattgcctcactgctttcaccaacggcctttgcactggggtcagtc
aactttgctgattatgagcgtgctcatgttggtcttcgttggagcaatatatggcgggca
tcgtcgggagtgaatttttcagtctgtctcctgatgatgttgctcgatgcgttgctttac
tgtgtaattggtctttacctagataaggtacttcctagagagaatggagttaggtatccc
tggaacttcatttttcagaagtggttttggaagactccggatattaacaagtaccacaag
tccagtctaggagttcacattcgtgacaaggtatctgagaacgcaatattttctggtaaa
gaaaatactaaagctgctgtggaagcaataaactttgatatgcgacaacaagagcttgac
catagatgcattcaaataaggaatctgcataaggtttatgctagtaagaaggggaaatgt
tgtgctgtcaactcattacagctcaccatgtatgaaaatcagattcttgctcttcttgga
cataatggagctggtaaaagcacaacgatatcaatgcttgtaggccttcttcgtccgact
tcaggcgatgctgtggtgtttggaaagaatattataacagacatggaggaaatacggaaa
gagctgggtgtatgccctcagcatgatatcctttttccggaattgacggtgaaggagcac
ttggaaatattcgccatcttgaaaggtgtgcaggaagattttgtgaacagcgtagttgtt
gatatggttgaccaagtagggttggcagataaaatgaacaccactgttatggctctttct
ggaggcatgaagaggaagttgtctcttggaattgcactaataggaaatagtaaggttata
attcttgatgaacctactagtggaatggatccatactctatgcgcttgacttggcaattg
ataaaaaagattagaaagggcaggatagtattactgacaacacactcaatggatgaagct
gaggcacttggagatcgcatagccatcatggctaatggttctttgaaatgctgcggaagc
tctctattcttgaagcatcagtatggggttggttatacactgactctagtgaagtctgca
cccactgcctctatggctgctgatattgtttatcgccatatcccatcagcaacatgtgtg
agtgaggttggaactgagatatccttcaagcttccattggcatcgtcatcatctttcgag
agtatgtttagagaaattgagagttgcatgagatcatccaagttaaacgtaggaacaagt
tctgttgagaaagactatattggcattgaaagttatggcatatctgtcacaactttggag
gaagtgttcctgagggttgcaggatgtgattatgacgaagctgctcgttttgaccagaag
gagggtctactatgccctgagtctcagacttctcatgatcctacccagaaacagatattt
cactcgaagaaatcttttgcttattataaagagattcttggggtcttatttacaatggtg
ggaagagtctgtggtttgatatttgcaacagtgttcagttgctttaacttcttaggtgtg
caatgctgtggctgttgtatcatttcgaggtcaacattttggaggcattctaaagcattg
ttcataaagagggcaatatctgcacgcagagaccgtaaaacaattgttttccagcttgta
attcctgcagttttcttactttttggtcttttacttctcaagctcaagccacatcctgat
cagcagtctgttaccttcacaacttcacattttaatccgctactacgtggtggtggtgga
ggtggtccaattccttttgatctgtcctggcctattgcacaaaaggttgcagaacacatt
gaagggggttggatacaaaccttcaaacctagtgggtataagttcccaaactcagagaag
gcattgcatgatgcaattgaggcagcgggggaaactctgggacctgttttactttcaatg
agcgaatttttgatgtccagctttaatgaatcttaccagtcaaggtatggtgcggttgtg
atggatgatcagaatgatgatgggagtttagggtacactgtgctccacaacagttcctgt
cagcatgctgccccaacctatataaatttaatgaatactgcaattcttaggcttgcttct
cgtgataagaatatgacaattcaaacacgcaatcaccctctgccaatgacacaaagtcaa
catctgcaacgacatgatttggatgctttctctgctgcagtaattgttagtatcgccttc
tccttcattcctgcatcatttgctgttcctatagtgaaggaacgtgaagtaaaagctaag
caccaacaacttattagtggggtttccatactgtcatattggacttctgcatacatatgg
gacttcatcagcttcctctttccttcatcttttgccataatacttttttatatatttggt
ttggaccagtttattggaaagggatgcttactgtcgacaatcgtcatgtttttagcatat
ggattagcaattgcatcatcaacatactgccttacatttttcttctcggaccacactatg
gctcagaatgtggttctcttggttcactttttcacgggacttattcttatggttatctca
ttcattatggggcttataaagacgacagcaagtgcaaattcttttctcaagaattttttc
agattgtctccgggattttgctttgctgatggtctggcttcacttgctcttctacgtcaa
gatatgaaaaataaatcaagcaataaggcctttgattggaatgttactggtggctcaata
tgctaccttggtattgagagcatttgttacttccttctggcacttggtcttgaaatcctg
cctttcaataaattgacaccaactacactcaaggagtggtggaagagtagaaaaagtatt
gaccctgacacttcaagttatcgagagccccttttgacgtcttccgcagagtctgtcact
gtggaccttgatgaggacacagatgtgaagacagaaagaagtagggtactttcaggtgcc
attgacaatgccatcatctacttgtgtaatcttcgtaaggtgtatccgggaggacagcca
catgctacaaaggttgcggtacattcattaaccttttcagttcaagaaggagaatgtttc
ggttttttaggaacaaatggagcggggaagaccacaactctatctatgttgacaggtgag
gaatacccaacagatgggagtgcttatatatttggcaaggatatttgctccaaacccaag
gctgctcgtcaatatatcgggttttgcccacagtttgatgctctgttggaatatttaact
gttcaagagcatcttgagctatatgccacaataaaaggagtaccggattttaagataaat
gaggttgtaatggaaaagttgatggagtttgacttgctaaagcatgccagcaaaccatca
ttttccctcagcgggggaaacaagcgcaaattatctgttgcaattgctatgattggagat
cctcccatagttattcttgatgagccatcaacaggtatggatccaattgccaaaagattc
atgtgggaagtgatatcccgtttgtcaaccagacgaggaaagacagcagtgatactcacc
acccatagtatgaatgaagcgcaagctctatgcacccgtattggaatcatggttggaggc
caattaatgtgcattggaagtccccagcatttaaaaactcgatttggaaatcatcttgaa
ctggaggttaaacctattgaagtcagctctatggacttggacaagctttgccgggttatc
caagaaaggctctcacatgttccttctcatccaagaagcttgctcgatggccttgaagtc
tgcattggtgccactgactccattgtggcagaaaatgcatcggtggcagaaattagttta
tcacgagagatgataattatgatcggacggtggcttggcaatgaagaaagaataaaacca
cttatatgtcctacaccactttcggatggggtgcttggtgaacaattatttgagcagtta
gatcgagatggtggaataccattgctaatattttccgaatggtggctatccagtgaaaag
ttttcagcaatcgattcatttgtcttatcatcatttcctggtgcgatgttccagggaatg
aacggcttgagtgttaaatatcagttgccttgtggtccagacctctctcttgctgatgta
tttggacacctagaacggaaaagaaatcgcctcggcattgcagagtacagtattagccag
tctacgttagagaccatattcaatcatttcgcagccagcccttga
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