Argentina anserina (silverweed cinquefoil): 126801562
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Entry
126801562 CDS
T10558
Name
(RefSeq) protein transport protein SEC16B homolog
KO
K20353
COPII coat assembly protein SEC16
Organism
aans Argentina anserina (silverweed cinquefoil)
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aans04131
]
126801562
Membrane trafficking [BR:
aans04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
126801562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
TctA
Motif
Other DBs
NCBI-GeneID:
126801562
NCBI-ProteinID:
XP_050384906
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All DBs
Position
7:11723554..11732103
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AA seq
1661 aa
AA seq
DB search
MASSAFELDDQTDEDFFDKLIDDEDIDFSAYGKSSVATKVELNVVKEVSKLSVTDAGSSG
SIGSQGGGELGGKDGSVLEPSDPKEDSLTSALVAKGEEGVVDGRVSTSVVSVDSELGPVD
GSNGQLGRGNEVVIASLEQHQDPVVGEGRKLSVLLNSDEAVEDKASNVASALEGEGEESA
VDGTVSKSVVPEGTGVKVVQWSSFNSDPSSGGGFGSYSDFFSEVADNSEDPFANLGNTDQ
VNGVLVNSVSAFGHSSYGQHQEDPFANLGNAGEFGATSVLTNGVLENTVSGFQTSSYGQH
HEDPFAILGNVNQTGAKPAMTNGVQQNLVSGLDASIYGKHQEDPFANLGNIDQSGTEYYV
GNGVPESSVSGYGTSGYGQHQEGQFYGASENQNLDGQELNTSQNWENLYPGWRYDPNTEQ
WYPLEGNDMNVSGIADVNNNANAQKSINVNSQSVDASYFQQAVQTVSKSVVEASETGTVV
NWNQHSHGNPEYPAHMVFDPNYPGYYYDTNIQQWRELESYVPAIDQSTTVVHNQQYHDTN
VENHGSQNPNWDIATSFYDQQNTSTWHAENVAKSDTIGFTEKQQYNNTDADNHGSQSSNV
QPSVPNWDGSMTASDQQNTSLWHAQHNTEKLPYLDRKISTEHAFNSVNRQTGFNPSGSIA
LHQDLSQGNDISSAISGFDPANFSQPQDQAKVPNQVMHFSPANFVSQTPAPFFQQPLQNG
PLYSHEVRDGRSSAGRPAHALVTFGFGGKLIVMKNHSSFHANQTYGSQGSAEGVINVLNL
MDVVKEKNEAANFGTDGCDYFSALCQQSFPGPLVGGNVGNKELNKWIDEKIANCGTPHLD
FKEGEHLRLLFSVLKISWQFYGKLRSPFGSDQRLKEIDSPESALAKLFASAKSSNEYGTL
TRCMHNLPSEAQVQATALEVQKLLVAGRKHEALQYAQEGQLWGPALVIASQLGDQFYCDT
VKHMALTQLVAGSPLRTLCLLIARQPADVFSDATANSSFPIIKNVLHQHEQVGANYMLDD
WEENLAILTANRTKDDELVIIHLGDSLWKDRGQITAAHICYLVAEASLEQYSNSSRLCLI
GADHWKFPRTYASPEAIQRTELYEYSKVVGNPQFLLLPFQPYKLIYAHMLAEVGKLADAL
KYCQAISKTLKTGRTAEVDIWRELVSSLEERIRAHQQSGYSINLAPTKLMGKLRTFIDTT
AHRVVGGLPPPVPATAPGFAQLNEHAHQPVYPNVATSPSTMVMPSASKPVYPNLTTSPST
MVMPSASMPVYPNVTTSPSTMVMPSLMPSASMEPISERTSESNQLNMPNRSISEPDFGKS
PSKVDSSKTVDSSKTPQKTSASGRSRFGFGSQIFQKTLGLVIRSRTDKQAKLGETNKFYY
DEKLKRWVEEGAEPPAEEAALPSPPPTTAAIQNRMQDYNVNDALKSTSFPAGGGPEIKSP
ASLSSGGPPVAPGSNQFSSRGRTGVRSRYVDTFNKGGATPGNLFQPPSLPAAKPGSGSNP
KFFIPSPVTSYQESVQTTGESTQESFVTNNNPPNSVDTFSTPPASTPSSMISATKSLDTF
STLPATTPSLMTMQRFPSMDHIVQKRGGELANGSSFVPPESRRVASWSGSLSEASNPSIR
GETKPTAVGMSPLSYMPSVTPPMQFQRSSGSFGDDLQEVEL
NT seq
4986 nt
NT seq
+upstream
nt +downstream
nt
atggcgagttctgcgtttgagttggatgatcagacggatgaggatttctttgacaagttg
attgatgatgaggacattgatttttcggcctatgggaagagctctgtagcaacaaaagtt
gagcttaatgtggtgaaagaggtttccaagttgagtgttacggatgctggttctagtggc
agcattggttctcagggtggtggtgagttgggtgggaaagacggcagtgtgttggagcca
tcggatccaaaggaggactctttgactagtgcattggtggccaaaggggaggaaggtgta
gtggatggtagagtgagtacgagtgttgtatcggttgatagtgaattgggtcctgtggat
gggagtaatggtcaattggggcgcggcaatgaggttgtgatagcgtcgttggaacagcac
caggatcctgtggtcggtgaaggaagaaagttatcggtgctgttaaatagtgatgaggca
gtggaggataaagctagtaatgtggctagtgcattggagggtgaaggggaggaaagtgca
gtagatggtacggttagtaagagtgtggtgccagagggtacaggggtcaaagtagttcaa
tggagttcgtttaactcagatccttctagtggtggtggatttgggtcgtactcggatttt
ttcagtgaagttgccgataattcagaagacccatttgcgaatttgggtaatactgaccaa
gttaatggtgttttggtaaactcagtttctgcattcggtcattctagctatgggcagcat
caagaagatccatttgcaaatttgggcaatgcaggtgaatttggggccacatctgttttg
actaatggtgttctggaaaatactgtttctggtttccaaacgtctagctatggccagcat
catgaagacccatttgcaattttgggtaatgtaaaccaaacaggggccaaacctgcaatg
actaatggtgttcagcaaaacttggtttctggtttggatgcttctatctatgggaagcat
caagaagatccatttgcaaatttgggtaacatagaccagtctggcactgaatattatgtg
ggtaatggtgttccggagagctcagtttctggttacggtacttctggctatgggcagcat
caagaaggtcaattctatggggcttctgaaaatcaaaacttagacgggcaagaattaaat
actagtcagaattgggaaaacctctatcccggatggaggtatgatccaaatactgagcag
tggtatccattggagggtaatgatatgaatgtaagtggaattgcagatgtgaacaacaat
gcaaatgctcagaagagtattaacgtaaattctcagtctgtagatgcttcttatttccag
caagcagtgcagactgtttccaaaagtgtggttgaggcatctgaaactggcacagttgtt
aattggaatcagcattctcatgggaacccagaataccctgcacatatggtttttgatccc
aattaccctggctattactatgacacaaatatccaacaatggagggagttggaatcttat
gttccagcaattgatcaatcaacaactgtggttcataatcagcaatatcatgatacaaat
gtagagaatcatggatcacagaatccaaattgggatatagctactagcttttatgatcag
caaaatacgagtacctggcatgctgagaatgttgccaagagtgacactattggttttact
gagaaacagcaatataacaatacagatgctgacaaccatggatcacagagttcgaacgtt
caaccaagtgttccaaactgggatggatctatgacagcctctgatcagcaaaatacgagt
ctatggcatgctcagcacaatactgagaaactgccatacttggaccggaaaatttcaact
gagcatgcatttaattctgtgaatcgacaaacagggttcaatccttctggatctattgct
cttcatcaagacctaagtcagggcaatgatattagtagtgcgattagtggctttgatcct
gccaacttttctcagcctcaggatcaagccaaggtgccaaaccaagtgatgcatttctca
cccgctaactttgttagtcagacaccagcaccattttttcagcagccactacagaatgga
cctctgtattcacacgaggttagagacgggaggtcatctgctggacgacctgcacatgct
ctggttacatttggatttggtgggaaacttatagtaatgaaaaatcatagttcatttcat
gcaaaccagacgtatggaagccaggggtctgcagaaggtgtcattaacgttctcaatctg
atggatgttgtcaaggagaaaaatgaggctgcaaactttggaactgatggttgtgattat
ttcagtgccttgtgccagcaatcttttcctggacctttagttggtgggaatgtcggaaat
aaggaattaaacaaatggattgatgaaaaaattgcaaattgtggaactcctcacttggat
ttcaaggaaggggagcatttgagattgcttttctctgtactgaaaatatcttggcaattt
tatggaaaacttcgatctccctttggtagtgatcaaagattgaaggaaattgatagtcca
gaatcagctcttgctaaactttttgcgtctgctaaaagtagtaatgagtatggtactctt
acacggtgcatgcataatttgccttctgaagcacaggttcaggctactgctcttgaagtg
caaaagcttcttgtcgctgggagaaagcatgaggctttacaatacgcacaagaaggtcaa
ttgtggggaccagcacttgttattgcatctcaacttggtgatcagttttattgtgatact
gtgaagcatatggctctaacccagttggtagccggatcaccattgcgaacgttgtgcttg
ctaattgccaggcagccggcagatgtgttttccgatgctactgcaaatagcagttttcct
attatcaaaaatgtgttgcatcagcatgaacaggttggagctaattacatgttagatgac
tgggaagaaaatctggccatcttaactgcaaatagaacgaaggatgacgagcttgttatc
atccatcttggagattctttatggaaggataggggacagataactgctgcacacatatgt
tatttagttgcagaagccagccttgagcaatattcaaacagttcaagactgtgtcttatt
ggtgctgatcattggaagtttccacgaacatatgccagtccggaggctattcagaggaca
gagctgtatgaatattcaaaggtagttggaaatcctcagtttcttctactaccatttcag
ccgtataagcttatttatgcccacatgctggctgaagtaggcaaacttgctgatgcgttg
aaatattgccaagcaatttcaaagactttaaaaactggtcgaacagctgaggtggacata
tggagagagttagtgtcgtctctggaagagcggataagagcccaccagcagagtggttat
agcataaatttggctccaaccaaattgatgggtaaattgcgtacattcattgatactact
gctcatcgtgttgttggaggcctacctccaccagtaccagcaacagcaccgggctttgct
cagcttaatgaacatgctcatcaaccagtatatccaaatgtagccaccagtccgtcaaca
atggttatgccttcagcatcaaagccagtatatccaaatctaaccaccagtccatcaaca
atggttatgccttcagcatcaatgccagtatatccaaatgtaaccaccagtccatcaaca
atggttatgccttcgttaatgccttcagcatcaatggagccaataagcgaaaggacttct
gagagcaaccaactgaatatgcccaacagaagcatttcagagccagactttggtaaaagc
cctagtaaggttgattcttccaagacagtggactcctctaaaaccccacaaaaaacatca
gcatccggcagatcacgttttggttttgggtcacagatatttcaaaagactctaggactg
gtcataagatcccggacagataagcaggctaaattgggtgaaacaaataagttttactat
gatgaaaaactcaagcgttgggttgaagaaggtgctgaacctccagccgaggaagcagcc
ttaccatcacctccgccaacaactgcagctatccagaataggatgcaagattacaatgtg
aatgatgcgctgaaaagcactagtttccctgcaggtggcgggccggaaattaaaagccct
gcatctttgagttcagggggaccaccagttgcacccggttcaaaccagttctcttcgcgt
gggcgtacgggtgttcgctcgaggtatgttgatacattcaacaaaggcggtgcgacccca
ggtaacttatttcagccgccatctcttccagctgctaaaccagggagtggttccaatccc
aagtttttcatcccgagtccagtaacttcctatcaggaatcagttcaaacaactggagaa
agcacacaagaatcttttgtgaccaacaacaatcctccaaattcagtagacacgttctct
accccgccagcctcaacaccgtcatcaatgatcagtgctacgaaatctttagatacattc
tctaccctgccagccacaacaccatcgttgatgaccatgcaacggtttcctagcatggat
cacattgtacaaaagagaggaggagaattggcaaatggcagtagctttgttccacctgaa
tctcgtcgtgtggcatcatggagtggcagccttagtgaagcaagcaatccttcgataagg
ggtgaaacaaaaccaacagcagtaggtatgtccccattgtcgtatatgcctagtgttact
ccaccaatgcagtttcaaagaagcagtggtagttttggggatgaccttcaagaagttgaa
ctataa
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