Argentina anserina (silverweed cinquefoil): 126801590
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Entry
126801590 CDS
T10558
Name
(RefSeq) RNA polymerase sigma factor sigA
KO
K03086
RNA polymerase primary sigma factor
Organism
aans Argentina anserina (silverweed cinquefoil)
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aans03021
]
126801590
Transcription machinery [BR:
aans03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
126801590
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
HTH_36
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
126801590
NCBI-ProteinID:
XP_050384943
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Position
7:24227727..24231700
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AA seq
502 aa
AA seq
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MATAAAVVGLSSTGKRLLSSSLYYSDITDKLFYLNDHGFVNCQLSSTKNVVTARKSSSSY
SNSRFPSSNRHYEQSIRALKEHADAASTPSSTTHHLLEEYNDFEEESSDLEYSVEALLLL
QKSMLEKQWNLSFEKKLSTRKITDKKITVTCSGVSARQRRMTTKRKTPSTNKHFRATISP
TLLQNRVRGYVKGVTSEHLLTHTEVVRLSKKIKIGLSVEEHKSRLKEKLGCEPSDEQLAT
SLRISRTELQSKLIQCYLAREKLTMSNVRLVMSIAQRYDNMGAEMADLIQGGLIGLLRGI
EKFDASKGFKISTYVFWWIRQGVSRALVENSRTLRLPTHMHERLGLIRNAKVRLEEKGIT
PSIDRIAESLNMSKKKVRNATEAISKVFSLDRDAFPSLNGLPGETHHSYIADNRHENIPW
HVMEELALKDEVNKLIHMMLGEREREIIRLYYGLDNECLTWEDISKRIGLSRERVRQVGL
VALEKLKHGARKREMEAMLVQH
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggccacagctgctgctgttgttgggcttagtagtacggggaagaggctcttaagttct
tccttgtattattcagatatcacagataagctcttttatctcaatgatcacggcttcgta
aattgtcaattgtcttcaactaagaatgttgtcactgccagaaagtcgtcttccagttac
agtaattcgagatttccatcttcaaatagacattatgaacagtcaatcagggctttgaaa
gagcatgcagatgctgcctctactccttcatcaaccacacatcacctgcttgaggaatac
aacgacttcgaagaggaaagctctgatctcgaatattcagtggaggcacttcttctgcta
cagaagtctatgctggaaaagcagtggaatctttcctttgagaaaaaactgtcaacaaga
aaaataactgataagaagataacggttacttgctctggtgtatctgctcggcagaggagg
atgactactaagaggaaaacacctagcaccaataagcatttcagagcaactattagtccg
acgctgctgcagaatcgtgttaggggttatgtgaagggtgttacaagtgagcatttgctg
acccacactgaggtcgtacggctgtcaaaaaaaattaaaatcgggctttcagtggaggag
cataaatcaagactgaaggagaaactgggctgtgagccctctgacgaacaactcgcaact
tcactgaggatttcccgaactgaattacagtcaaagttaatccaatgttatttggcaaga
gagaagctgacaatgagcaatgttcgtctggtcatgtccattgcacaaagatatgataac
atgggtgctgaaatggctgaccttatccagggaggcttaattggactactacgcgggatt
gaaaaatttgatgcatcaaaggggttcaaaatttctacttatgtgttctggtggatacgt
cagggggtttcaagggcactggttgaaaattccagaaccttaagattgcctacacatatg
catgagagattagggttaatcagaaatgcaaaagttagattggaagagaaaggaataact
ccatcaattgataggattgcagagagcctgaatatgtctaagaagaaagttagaaatgct
actgaggctatcagtaaggttttttctcttgatagagatgcgttcccctctttgaatggc
cttccaggagaaactcatcatagttacattgctgataatcgccacgaaaatatcccttgg
catgttatggaagagttggcactaaaggatgaagtaaacaagctcatacatatgatgctt
ggggagcgggagcgagagatcatacgactttactatggtctggataatgaatgtcttaca
tgggaggacattagtaaacgcataggattgtccagagaaagagttaggcaagtcggactg
gttgctctagagaaactgaaacatggtgcgaggaaaagagagatggaggccatgctagtc
caacattga
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