Argentina anserina (silverweed cinquefoil): 126801688
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Entry
126801688 CDS
T10558
Name
(RefSeq) uncharacterized protein LOC126801688
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
aans Argentina anserina (silverweed cinquefoil)
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aans04121
]
126801688
Enzymes [BR:
aans01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126801688
Ubiquitin system [BR:
aans04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
126801688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-1st
SHPRH_helical-2nd
Helicase_C
zf-RING_UBOX
zf-C3HC4
PHD
zf-C3HC4_3
zf-RING_2
HGD-D
ARM_TT21
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
126801688
NCBI-ProteinID:
XP_050385075
LinkDB
All DBs
Position
7:complement(20907030..20916824)
Genome browser
AA seq
1672 aa
AA seq
DB search
MGRRKQNRPHRAGGIVLESGATAGRAELDGERQLNREAQKKDIDEVEIPYFVDVDRTNWG
SDEHFDIAEVVLTDLTFGEGFCGDVLGGGLDRDSYSLRFRLSNVKEFVNRIKLGHWPLLS
SADISLEFVKTRSSEDMEMEKDTCSVIFSGSFDGPDEGISGLVHLASLKFMTLRPALSIE
FVNDTSTIRIRVEILKSAFDACESLLDNTRQVWKKSMMNVMAWLHPEVMTSEARYGVGIS
TDMEVDPHIDTGHANSNHSKHARFDVAGFYEAIKPSKMDAMLHDVLPDLLPELKPYQRRA
AYWMVQREKIDAESMAQEAKSQSTLPLCLPLQFLDRCSKMFYNPFSGNVSLHREHFSTCV
SGGILADEMGMGKTVELLACIFAHQKSADEDPVCADAEIQDTEDMKINLRRLKRERIECT
CGAVSESSRYRGLWVQCDICDAWQHADCVGYSPSGETKKSSEASNEKEHEKSLVVNKNTS
KKNITTIDVKDEEYICQLCSELIQATTSPVATGATLIICPASILPQWHSEIVRHTRSGSL
KTCIYEGVREASFTNTSVIDVDELISADIVLTTYDVLKADLSHDSDRHEGDRRLMRFQKR
YPVVPTILTRIFWWRICLDEAQMVESNAGPAIEMAMRLYAKHRWCITGTPIQRKLDDLYG
LLRFLKACPFNASRWWIEVIRDPYERRDAGAMEFTHKFFKEIMWRSSKVHVADELQLPPQ
EECLSWLTLSPVEEHFYQRQHETCVSYAREVIESLKEDIMKRTVRGFSAAKLSDYFITHA
EAGKLLNALLKLRQASCHPQVGSSGLRLRSLQQSPMTMEEILMVLVSKTKIEGEEALRRL
VVALNGLAGIAVIEQNFIQAVSLYKESLTLAEEHAEDFRLDPLLDIHIHHNLAEILPLAT
SCSPSKAELIPGNKASCYDHVAKRRKVIGGNNSSENDFSVAQEYDDVSHASCSSFTDISL
RTVCDNLKEKYLSAFNSKLFLTQQEFKKSYTQVCSTINEIKDVSTVWWLEALLHAEKSND
ISSLLIRKIEEALVGNLNNSKSSRIPSRLRSISALKYHMQTGLDQLEESRIMLLDRLLEI
DQTMKKPNEEDIQRVRYCRNCKANDGGPLCVLCELDELFQSYEARLFRLEKASGGIATSA
EEAVDLQKKNSALNRFYKKLSQPIKDSTSPKSNKESKKRDVGKVVVSKSPSELEVVLSVI
KSHCKAHLGKEGISEATKHLQILEGMRKEYGHARSLAIAQAQILQAYDEINMATSRLRLR
EDENDKSLDALSEDELPSANVFNTSEKFASFSLLSSIKGKLRYLKGLVEAKQKRPSSPNH
SSVTEEKASIPTSTEQRNECIPRSDKETCPVCQEQLTIRKMVFPCGHLTCCKCLFAITER
LLNGRKVQDKWVKCPTCRQHTDVGNIAFADDGQIESCGSARLQAIRSREECEACIIVQGS
YGTKIEAVTRRILWIKSTDPEAKVLVFSSWNDVLDVLEHAFSANGITFIRMKGGRKSQVA
ISEFKGENRSSTGYHKLPGRNPEGRSIQVLLLLIQHGANGLNLLEAKHVILIEPLLNPAV
EAQAISRVHRIGQTNKTLAHRFIVKGTVEESIYKLNKSRNSTAFISGNTKNQDQPLLTLK
DIEALFSTVPSLPVPETDERPTESESLRHLPPSVAAAIAAENRLKEQHLCSS
NT seq
5019 nt
NT seq
+upstream
nt +downstream
nt
atgggtagaaggaagcaaaatcggcctcaccgggctggtgggattgtattagagagtggg
gcaactgctggccgggctgaattggatggggagaggcagttaaatagggaagcgcagaaa
aaggacatagatgaagttgaaataccgtattttgtagacgttgatcggactaattggggg
tctgatgagcactttgatattgctgaagtggttctaacagatttgacttttggagaaggg
ttttgtggtgatgttcttggtgggggtttggatcgcgatagttactccttaaggtttcgg
ttatctaatgtgaaggaatttgttaatcgtattaagcttggtcactggcctttgttgtcc
tctgctgatatatctttggaatttgttaaaacacgttcgagcgaggatatggagatggag
aaggacacgtgctcagtgattttttcaggaagttttgatgggccagatgaaggtatatct
ggtctggttcacttggcaagtttgaagtttatgacactgaggccagctctgtcaattgag
tttgtgaatgatacgtcaaccatcaggatcagggtggagatactgaagagtgcatttgat
gcttgtgagtcacttctggacaatactaggcaagtgtggaaaaagagtatgatgaatgtc
atggcttggctacacccggaagtaatgacttctgaggctaggtatggagtcggtatatca
acagacatggaagttgatccacatattgacactggacatgctaattcaaatcacagtaaa
catgcaagattcgatgttgctgggttctatgaagccattaaaccctcaaaaatggatgca
atgcttcatgatgtcctgcctgatttgcttcctgaattgaaaccatatcagcgccgtgca
gcttactggatggtacagagggagaaaattgatgcggaaagtatggcccaagaggccaaa
agtcagtcaacgttacctttatgtttgcccttgcaatttcttgacagatgttcgaaaatg
ttctacaacccattcagtggaaatgtttcgctgcaccgagagcatttttcaacgtgcgtg
tctggtggtattcttgctgatgagatgggcatggggaaaactgttgaacttctcgcttgc
atctttgctcatcagaagtcagcagatgaagaccccgtatgcgctgatgctgaaattcaa
gataccgaggatatgaaaataaatcttagaagattgaaaagggagcgaattgaatgtaca
tgtggagccgtgagtgaaagtagcagatacagaggactatgggtacagtgcgacatatgt
gatgcatggcaacatgcagattgtgtgggctactcacctagtggagagactaaaaaatcc
agcgaggcttctaatgaaaaagaacatgaaaagagtttggtggttaataagaatactagt
aagaagaatataaccacaatagatgtgaaagatgaggaatatatatgccagctgtgctca
gagctgattcaggccactacttctcctgttgctactggtgccactcttataatctgtcca
gcatctatattgccccagtggcattcagaaattgtgcgccatacgcgttcgggttcttta
aagacctgcatctatgaaggtgtgagagaggcctcttttacaaacacatctgtaattgat
gtcgatgaactcatcagtgctgatattgtgctgacaacatatgatgtgcttaaagcggat
ctgtcacatgactctgataggcatgaaggtgatcgacgcttaatgagattccaaaagaga
tacccagttgtgccaactattcttaccagaatattctggtggaggatttgtttggatgag
gctcagatggtggagagtaatgctggtcctgcaatagaaatggccatgcgactttatgcg
aagcatcgctggtgcataacagggactccgatacaacgtaaacttgatgacttatatgga
cttctacggtttctaaaagcatgcccgttcaatgcttctaggtggtggattgaagttata
cgagatccgtatgagaggagagatgcaggagctatggaatttacacataaattctttaaa
gaaatcatgtggcgatcctcaaaagtgcatgtagcagatgagttacagcttccacctcag
gaagaatgtctctcttggctcactttatctccagttgaagagcacttttaccagaggcaa
catgaaacctgtgtgagttatgctcgagaagtcattgaaagtttgaaagaggatattatg
aagagaacagtcagaggattttcagcagctaaattatcagattatttcatcacacatgca
gaggcaggaaagctgctgaatgcacttttgaagcttcgacaagccagctgtcaccctcaa
gtaggaagctcaggactgcgtttgcgttctctccaacaatctcccatgactatggaggaa
attttaatggttctagttagtaaaacaaagatagaaggggaggaagctctcagaaggtta
gttgttgctcttaatggcctcgctgggatagctgtaattgagcagaattttattcaagct
gtatcattgtataaggaatcgttgactctagctgaagagcatgctgaggatttccgcctg
gatcctttgttagatattcacattcatcataatcttgctgaaatacttccattagcaaca
agctgctccccttcaaaagcagaacttattcctgggaacaaggcttcttgttatgaccat
gtagcaaagaggcgaaaagtgattgggggaaataactcatcagagaatgacttttctgtt
gcccaagaatacgatgacgtgtcccatgcatcatgtagttccttcactgacatatctttg
agaacagtctgtgacaatctaaaggaaaagtacttatctgcattcaattcaaagttattc
ttgacccagcaagagtttaagaagtcttacacccaggtctgtagcacaattaacgagata
aaagatgtcagcacagtctggtggttagaagcccttcttcatgctgaaaagagtaatgac
atttctagtctgttgatcagaaagattgaggaggcgctcgtaggaaatctaaacaattca
aagtcatctagaattccatctcgtttacgaagcataagtgctctaaagtatcacatgcag
actggtttggaccaactagaagaatctaggataatgttacttgatcgtcttttagaaatt
gatcagacgatgaagaagccaaatgaggaggatatccagcgtgtgagatactgtcgaaat
tgcaaagctaatgatggtggtcccttatgtgttctttgtgaattagatgaactatttcag
agttatgaagcaaggctttttcgtcttgagaaagcatctggaggtattgctacctccgct
gaagaggctgttgatctgcagaagaagaactctgctcttaatcgtttctataaaaaattg
tcacagccaattaaagattcaacatcacccaaatctaataaagaatcaaagaagagagat
gttggaaaagttgtggtttcaaaatccccttctgaattagaggttgttcttagtgttatt
aaaagccattgcaaggcccatttaggaaaggaaggcatatcagaagctaccaagcaccta
caaattcttgagggcatgcgcaaggagtatggtcatgcaagatccttggcaatagctcaa
gctcagattctgcaagcttatgatgaaattaatatggcaacttcaagattgcgcctgagg
gaagatgagaatgataaatctcttgatgcattaagtgaagatgaattaccttccgctaac
gttttcaacaccagtgaaaagtttgcatcctttagcttattgtctagtataaaaggaaaa
cttcgttatttgaagggtttggtagaagcgaaacaaaaaaggccatcaagtccaaatcat
tcctcagttactgaagagaaagccagcataccaacttctacagaacaaagaaatgaatgc
atacctagaagtgataaagaaacttgcccggtatgtcaagagcagttaaccattcgaaag
atggttttcccatgtggacaccttacttgctgtaaatgtttatttgcaattaccgagaga
ctactcaatgggagaaaggttcaagataagtgggtaaaatgcccaacatgtcgacagcat
actgatgttggaaatattgcttttgctgatgatggacaaattgaatcttgtggttctgct
aggcttcaagcaatccgaagtcgtgaagagtgtgaagcatgtataatagttcaaggttca
tatggaacgaagattgaagcagttacgagaagaattctgtggataaagtctacggatcca
gaggctaaagttcttgttttctcaagctggaatgatgtccttgacgtattggagcatgcc
ttcagtgctaatggcattacctttataaggatgaaaggaggaaggaaatcacaagttgcc
attagtgagtttaaaggagaaaaccgaagctcaacaggatatcacaagttgcctggccga
aacccagaaggaagatctattcaagtgttgctgctcttaattcaacacggagcgaatggc
ctcaatctgttggaagcgaagcatgttattcttattgagccgctcctcaatccagcagtg
gaggcacaagccataagcagggtacaccgaattggacagacaaataagacccttgctcat
cgcttcatagttaaaggtacagttgaagagagcatatacaagctcaacaaaagtaggaac
agcactgccttcattagcggtaacacaaagaaccaagatcagcccttgttgacactaaaa
gacattgaggccttattttcaacagtgccatcattgcctgtaccagagaccgatgaaagg
ccaactgaaagtgaaagcttaagacatttgccaccttctgtggctgctgccattgcagct
gaaaatcgactcaaggagcagcatttatgttcttcatga
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