Argentina anserina (silverweed cinquefoil): 126801794
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Entry
126801794 CDS
T10558
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
126801794
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aans04040
]
126801794
Ion channels [BR:
aans04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
126801794
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Ion_trans
Motif
Other DBs
NCBI-GeneID:
126801794
NCBI-ProteinID:
XP_050385211
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Position
7:18196155..18202038
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AA seq
978 aa
AA seq
DB search
MDNPEITLQEIVQSSLSNSEPTKGKYVVKDGHKASTKRWSGLWTSKSAVGKLILKEILDP
EGPILEKWNLIFVISCLFAVLLDPLFLYIPLINQDMKCIGLDKKLKIAAVVSRSITDCVY
IVKIIFHVYKLAEKVTVLKALWESSILVDILAVLPIPQVVILIFFRGSRSLEAMKFTNFT
VLVQYVPRVLRIYLACKEVKHPPKGKLGLWIKGGLNFLMYTLASHIFGAFWYFFSIQRML
TCWQYACRSEDGCKPTTFDCHIYHTDRNIRFLNDQCPTNPSNSTLFDFGIYLDALQSSIV
GSKNYSQKFSKCFWWGLRNLSSLGSNLQPSINTWETLFATFTSITGLLLFLYLIGNLQMY
MQVESASKEQLRWKTELENMMRTERKMRIERSKGPEVEQWLAKNGLPMRFMPEIMEKVVQ
VDLEQNRDVDVENILSILPLQLQRDILVYKEKLEEEGRKIEFWLSENRLPMSLKLEIMEK
VVQQKLAENRDVHVDNFLDILPEERRSYIESYKQKFQEKDLEVGLWLSKNGIPMDTKSQI
MEKVQVELEENRDVEVKNILSFLPLDLQRRLEWYMPFSRLKRVTLLEKMDERLLKEICEN
LQPVEFPAKLVIMQENQPIEDVYFIVTGSVKRHSIYMSLLMFQNYETEICGEELLIWPLS
ASFPAVLPRATKTVMVGEGFSALHLTASDLESVASKFRPQWDLITSYWLTMLKKVPKLQC
MDEKVLKEFLPYLNKQDQIAARSSYGIQENVPLKAMYFITEGSLKFTKSDNGDEEFDRSA
GEFYGEELLDWVLDTSFPAITPISTHSALCHDHNAATVLAITAKDLRSVASKFSSQFILL
NTESQLDLSTFVNLTYLKKVPKLQAMDEEVLKAISERLIRKVFNYLHIIEEGKPLHMMLF
VVKGNAYLEKKHSTDRSTLKPGQFYGEELLDWPSWTSFPAMPLSKFTVKVHYGEEVEFLV
LTADDLKSVVSKLRTHFI
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atggataacccagaaattacgctgcaagagatagttcagagttcattgtcaaattcagaa
ccaactaaaggaaaatatgtcgtgaaagatgggcacaaggcaagtactaagagatggtca
ggactatggacttcaaagagtgctgtaggaaaactgatactcaaggaaattcttgatcct
gagggaccaatccttgaaaagtggaatctgatttttgtaatatcatgtctctttgctgtg
ttactggatcctttgttcctctacattcctctaataaaccaagacatgaagtgcattgga
ctagacaaaaagttgaagatagcagctgtggtttctcgatcgatcacagattgtgtttat
atagtgaaaatcatttttcatgtttataaactagcagagaaagtgacagtacttaaagct
ttatgggagtcatccatcctagttgacattttagcggttctccctattcctcaggtggta
attctcattttctttaggggctcaagatctttggaagcaatgaagtttacgaacttcact
gttctggtccaatatgttccacgagtcctgcgcatctatcttgcatgtaaggaagtcaaa
catcctccaaaaggaaagttaggattatggataaaaggtggactcaatttcctcatgtac
actcttgctagtcatatatttggagccttttggtactttttctctattcagagaatgctg
acatgctggcaatatgcttgtcgaagtgaagacggatgtaaacctactacttttgactgt
catatatatcatactgatagaaatatcagatttctaaatgatcaatgccctacaaatccg
tcaaattcaacgctctttgattttggcatatatctcgatgctcttcaatccagtatagtt
ggatctaaaaattattcacaaaagttttcaaaatgtttttggtggggtctacgaaatctg
agttctcttggttcaaacctccaacccagtatcaatacatgggagaccctcttcgcgacg
tttacttctatcactggcttgctgctatttttataccttattggaaatctacagatgtat
atgcaggtggaatcagcaagtaaagagcaactacgatggaagacagaacttgaaaatatg
atgagaactgaaaggaagatgagaattgaacgtagtaagggtccagaggtagagcaatgg
ctagccaaaaatggtcttcctatgcgtttcatgcccgagatcatggaaaaggtggttcaa
gtggatttagaacaaaacagggatgttgatgtggagaatatcctctcgattcttcccttg
caacttcaaagggatatcttagtttataaggagaagctggaagaggaaggtcgaaagata
gagttttggttatctgaaaatcgcctccccatgagtttaaagttggagatcatggaaaag
gtggtgcaacagaaacttgcagaaaatagggatgttcatgttgataatttcctagatatt
ctaccagaggaacgtcggagctatattgaaagttataaacagaagtttcaagagaaagac
ttagaagtcggattgtggttatccaagaatggcatccccatggatacaaagtcacagatc
atggagaaggttcaagtagaacttgaagaaaacagggatgtggaagtgaagaatatcctc
tcatttcttcctttagatctccaaagacgtctcgaatggtatatgcctttcagtaggctg
aagcgggtgacattgcttgaaaaaatggatgaaagattgttgaaagaaatttgtgaaaat
cttcaacctgtagagtttccagccaaattggtcattatgcaagagaatcagccaattgaa
gatgtgtacttcattgtaaccggatctgtaaaacggcattcaatatatatgtcgctgttg
atgttccagaactacgaaactgaaatatgtggagaagaacttctgatttggcctttatcg
gcttcttttcctgccgtattacctagagcaaccaagacagttatggtgggtgaagggttt
agtgccctgcaccttacggccagtgatctagagagtgttgcctctaaattcaggccacag
tgggatctcattacttcttattggttgactatgctaaagaaagtgccaaagcttcaatgt
atggatgaaaaagtgttaaaagaattcttgccgtatcttaacaagcaggatcaaattgca
gctagatcctcctatggtattcaggagaatgtaccacttaaagccatgtacttcatcacg
gagggatctctaaaatttacaaaaagtgataacggtgatgaggagtttgatcgttccgct
ggagaattctatggagaagaactcctagattgggtactagatacgtcctttcctgccata
acccccatttccactcattctgctctttgccatgatcacaatgcagctaccgtgttggct
atcactgccaaggacttgaggagtgtagcttctaaattcagctcgcaattcatcctcctt
aacacggagtctcaattagatctttcaactttcgtcaacttgacttatctaaagaaagtg
ccaaaacttcaagctatggatgaagaagttttgaaagcaatctctgagcgtcttataaga
aaggtgtttaattacctgcatatcattgaagagggaaaaccacttcacatgatgttattc
gtggtgaagggaaatgcataccttgagaagaaacatagcacagatagatcgacactaaag
cccggacaattctatggtgaagaactactagattggccgtcatggacctctttccctgcc
atgcccttatcgaagttcactgtcaaagtacactacggagaagaagttgaatttctcgtt
ctcacggcagacgacctaaaaagtgtagtgtctaaactgaggacgcatttcatctag
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