Argentina anserina (silverweed cinquefoil): 126801830
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Entry
126801830 CDS
T10558
Name
(RefSeq) uncharacterized protein LOC126801830 isoform X1
KO
K24155
rabconnectin-3a
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
126801830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aans04131
]
126801830
Membrane trafficking [BR:
aans04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
126801830
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
126801830
RAVE complex
126801830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
ANAPC4_WD40
EIF3I
Motif
Other DBs
NCBI-GeneID:
126801830
NCBI-ProteinID:
XP_050385251
LinkDB
All DBs
Position
7:complement(16013959..16027698)
Genome browser
AA seq
2546 aa
AA seq
DB search
MDPTLHLPLQILRSDPTPPAPTRSDPPGSTIDWLPDFLDLSWLAYAASSLLVLSHFPSPL
SDHETALGPIFRQVFELSGDPSSAVKAVSWSPVTPSLGEVAAASENCVWVFSHDSASSKG
SFCWSQNAVLVNSAKVEAIGWTGSGDGIIASGVEVVLWKRDGRSWEIAWKFRADQPQSLV
SATWSVEGPFATAAYQSKWLIEGLLTKEASKCVLVSQRDGKSEFVKSELQHPLPVSMIQW
RPLSGKPSGRDAKHPARHVLLTCCLDGTVRLWCEVDDGRARKVSKDINDHKATRWSFSVA
AVIEINLALNGILGIDIYVKWAAETGGVYKASAGAKQLFSAKGYEHDQVGNCEWLIGFSP
GMILTFWALHCLDDVSPVRFPRVTLWKTQELQVLERGDVYRTGLSNNKDRIPLNKVVILR
NCLSGPPEVCSFIQLLPCNLLVWSLLYTQTSNNVGDLSLSTPGRGNTLSCSAGGLLKLDG
HAGRILQVAVHPYSCELELAVSLDSDGLLLFWFFSTISNYILGRPTLLPTWEICGKLATQ
SSCSRYTSVRWAPSIVNEVAVLHMGHAGGIDCFIVRIHQNKEEMIECHYLCTIPFTGHGP
YEDGPNSISTIPLPATCHEILRCSKFMLLGVWMNGFEALSWEVTLHTFDISGSYCACDFE
TENGPESLRAFEGTFANIRYCLKVNACSSQIPDPYIHDEVTSFAVVCPGSMMRIEKHLDS
TTGQSSSCPAYLMATGCSDGTLKLWSSRIDKQSTPNILWELVGMFLAHKGPIGTVCLSDC
GRKIATVCKNFSSKTASNLHIWDPIHLAGAGSFMLEDTLSFDQELVALNWLPLGNGQLLL
GVCTSNQLHVYSHGRCGGQSLLNPETSVRKNIWVCIASTHTFPPICDFFWGPRATTVLIH
NSYFCINSQWLIPVDKKHRANGQSIVIADNCTGSVGGMKEDTVSTVFFDCERQQFDKALL
NKSRRDCKSGTLFNTNLENDLLSSNLFVASSQLDCASDTKLGLWTMLEVLEKLNEALPIY
HPEALFMNIYSGNWKRAYIALRHLNDFLSDSSSVSKNHLPKSSSFVPQILLSTFLDEIIS
KDSNDKGIQWSGDTVTSSSQLQRDFGQFTYSLDSNASNNLFSSSSTKYEVVDFVEHLEKL
YELVAITNTERMQILAIFDLLNEMTNSNSGSPYESLDEPGQRFWIALRFQQLLYFRKFGS
SVSLEELVVDSRLFGWAYHSDCQENLLGSFLPNEPSWQEMRNLGVGFWFTNTAQLRSRME
KLARLQYLKRKDPKDCALLYIALNRIQVLSGLFKISKDEKDKPLVAFLSRNFQEERNKAA
ALKNAYVLMGRHQLELAVAFFLLGGDTSSAVSICAKNLGDEQLAVVICRLTEGRDGPLER
HLISKSLLPFATERGDSWLASLLEWELGNYCQSFIKMLGLQINSATEMYATLSNGGAFSD
PNVGLYCQLLTTKNSMRNAIGERNTAILGRWAAFMTASALKRCGLPLEALEYLSSPTTNV
GDTNQGTVSDIGDFEKLHGILNPSPKNSSYWFSSNVAFHLEFHARLDLALQYFSTLIREH
PSWPATVFASFRANSHTNECENHEHVIVLQSFRQKLLTAVHHLEQKFSVVAIDLMSMVYL
SLYNRGLWFVGYEILNAYISQDEDLDKSQIFRFQLYPQMHKQLLKATRETSLLCSRVITA
CGITCFKLKPDCLENNVSGDSGCASLNAREYYFQGVILSIRSLKSALQIISVSSTEDLIM
EPLIIIDWIEYFVQFAYAWVKNNSKALFLLIQPLLITFTNGHTPYEVDLLDLKKILPQIA
ESVAQNCLIDNVCTGLQGSQGTDVVDSIPEDERWQIIGACLWQHISRLMKHKLGMSSYKL
EEGCISGVTHGQNISQVTCLENLGHNDNRIEELTGLVSLSMVKLLKTTLAHVSSYHVKHL
ASHLQHKIDTGCHVMTLIWLEEYNQSQTRGLNQHLNQDMLKLERKGEKHGSDILWDICAD
RKIISESFTQEKINWSHSLDHKPSKGWSNICRGITLDETEETHNCEVTPKRTSASSEAGL
PSRSLFRSGHSFLGGWHKDTTLTKEVSPFLNPKELYKRNGELLEALCLNSVNRKQAALAS
NRKGILFFNWKDDMPNRDHSDYIWSEADWPLNGWAGFETTPAPTFVSPGVGLGIKKGSHL
GLGGATVGVGSLARSAKDLTGGGAFGNQGYPGMRVSGLGWETREDFEEVVDPPPTVENAN
TRVFSSHPSRPFFLVGSSNTYIYLWEFGEDKATATYGVLPAASVPPPYALASISALQFDH
CGHRFATAALDGTVCTWQLEVGGRSNIRPTESSLCFNSHASDVAYVTSSGSIIAVAGYSS
TSVNVVIWDTLAPPSTSRASIICHEGGARSLSVFDNDIGSGSISPLIVTGGKGGDVGLHD
FRYIATGRSKRHRHVDKSEQAVKSSSNDYHPGDGYRFGEQNQNGMLWYIPKAHSGSVTKI
STIPNTSLFLTGSKDGDVKLWDAKRAKLVYHWPKLHERHTFLQPSSRGFGGVVQAAVTDI
KVVSEGFLSCGGDGTVKLVHLKDYQY
NT seq
7641 nt
NT seq
+upstream
nt +downstream
nt
atggaccccactctccatcttcctctccagatcctcagatccgacccgacccctcccgcc
cctacccgatccgacccgcccggatccaccatcgattggctccctgacttcctcgacctc
tcctggctcgcctacgctgcctcctccctcctcgtcctctcccacttcccctcccctctc
tccgaccacgaaaccgccctcggtcccattttccggcaggttttcgagctctccggcgac
ccctcctcggctgttaaggccgtgtcgtggtcgccggtgacgccgtcgcttggtgaggtc
gccgccgcatcggagaattgcgtctgggtgttctcgcatgattcggctagctccaaaggt
tctttttgttggagccagaatgcagtgcttgttaactctgcaaaagtggaggcgattgga
tggacaggctcaggggatggaattattgcaagtggtgttgaggtggttttgtggaaaaga
gatggtaggtcgtgggaaattgcttggaagtttagagccgaccagcctcaaagtttggtc
tctgcgacttggtctgttgaaggaccctttgcaactgctgcttatcagagtaaatggctg
attgaaggattgttgactaaggaggctagcaagtgtgtgttagtaagccagcgagatggc
aaatctgagtttgttaaatctgagctgcaacatcctcttcctgtctcaatgattcaatgg
aggccgttatcaggaaaaccttcaggaagagatgcaaagcatccagcaaggcatgtgctc
ctcacttgttgcttagatggaactgtcaggttatggtgtgaggttgatgacggacgggca
agaaaagtttctaaggacattaatgatcacaaagctacaaggtggtcattttctgtagcc
gctgtgatcgagataaacctggctctgaatggcattctgggaattgacatttatgtgaag
tgggcagcagaaactggcggtgtatacaaagctagtgcaggggctaaacaattattttct
gcaaaaggttatgaacatgaccaggttggtaattgtgaatggttaattggattcagtcct
ggaatgatattgacgttttgggctttacactgtctcgatgatgtctcgccagtaagattt
ccccgggttacattatggaagacacaagaactacaagtcctggaacgaggagatgtttat
aggactgggctttcaaataataaagatagaataccacttaataaagttgttatattgagg
aactgcttgtcgggtccaccagaagtctgctcttttattcagttattaccttgcaattta
ttggtttggtcactgctgtatactcaaacatcaaataatgtgggggatctttcccttagc
acacctggtagggggaacactttatcatgttcagctggtgggctcttgaaattggatggt
catgctggaagaatcttacaagtggcagtacatccttatagttgtgagcttgaacttgct
gtctccttagattctgatggattacttctattttggtttttctccaccatttccaactat
attttgggccgtccgacattacttcctacatgggaaatttgtgggaagcttgcaactcaa
agttcatgttccagatatacaagtgtgaggtgggcaccgtcaatagtaaatgaagtagct
gttcttcatatgggacatgctggaggaattgattgctttattgtgagaattcatcagaat
aaggaagaaatgatagaatgtcactacttatgcactataccttttacaggtcatggtcct
tatgaggatgggcccaacagtatctctacaattcctttgcctgcgacttgtcatgagatt
ctaagatgtagtaaatttatgcttttgggtgtatggatgaatgggtttgaagctctttca
tgggaagtaaccttacatacttttgatatatctggaagctattgtgcctgtgattttgag
actgaaaatggtccggaaagtttgcgggcatttgaaggtacttttgccaatataagatat
tgcctgaaagtaaatgcttgctcatcacagatacctgatccgtacatccatgatgaggtt
acaagttttgctgtggtctgtccgggtagtatgatgcgtattgaaaaacatttggattct
actactggtcaaagctctagttgtcctgcttatttaatggcgacaggctgctctgatggt
actttaaaattgtggagtagtagaattgataagcaatcaactcctaacatcctgtgggaa
cttgtgggaatgtttttggcacataaaggccctattggcactgtatgcttgtctgattgt
ggtcggaagattgcaaccgtctgcaagaatttttcttcaaaaacagctagcaatcttcat
atatgggatcctatacatcttgcaggtgcagggtcttttatgttagaagatacattatcc
tttgatcaagaacttgttgctttgaattggctgcctctgggaaatggtcagttactcctt
ggagtttgtacatcaaaccagttacatgtatattctcatgggcgttgtggtggtcagtct
ttgttaaaccctgagacatcagtgagaaagaacatctgggtttgcattgcctctactcat
actttccctcccatttgtgacttcttttggggaccgagagcaacaactgtccttattcat
aacagttacttctgtataaatagtcagtggttaatcccagtagataagaagcatcgtgct
aatggtcagtcaattgtcatagcagataattgcacgggttctgtgggtggaatgaaagag
gacactgtttctacagttttctttgattgtgaacgtcaacaatttgataaagcgttactt
aacaagagtagaagagattgcaagtctggtacactattcaatactaatttggaaaatgac
cttctatcaagcaacttgtttgtagcaagctctcagctagattgtgcttcggatactaag
ctaggtttatggacaatgcttgaagtcctggagaaattaaatgaagctctgccaatttac
cacccagaggccctctttatgaatatctattcaggaaactggaagcgcgcgtatattgca
ttgaggcatctcaatgattttctctctgattcttcttctgtgagcaagaatcaccttcca
aagtctagcagttttgttccacagattttgttgtcaactttccttgatgagattatctca
aaagattcaaatgacaagggaattcaatggagtggtgacacagtcacctcatcatctcag
ttgcagagagactttggccagtttacttacagtttggattctaatgcttccaataatttg
tttagttcatcttcaacaaaatatgaagttgttgattttgttgaacatctagagaagttg
tatgaattggtagctataaccaacaccgagaggatgcagattcttgctatttttgatctc
ctcaatgaaatgaccaattcaaactctggttctccatatgaaagtcttgacgaacctgga
cagaggttctggattgcattgaggtttcagcaactactatatttccggaagtttggtagt
tcagtatccttggaggaattggttgttgactccaggttatttggatgggcctaccactct
gattgtcaggaaaatttgcttggatctttcctacccaatgaaccatcttggcaagaaatg
cggaatttgggtgtaggattttggtttacaaatacagcacaactccgttcaaggatggag
aaattagcaaggttgcaatatctgaagaggaaagatcctaaggattgtgcattgctgtat
attgcactgaatagaattcaagttctatcaggacttttcaaaattagtaaggatgagaag
gacaagcctttggtcgcctttctttcacgaaattttcaggaagagagaaataaggcagct
gccttgaagaacgcatatgttttgatgggtaggcatcaactggaattggctgttgctttc
tttctgcttggaggtgatacttcttctgctgtcagtatttgtgcgaagaaccttggggat
gaacagcttgctgttgtaatttgccggcttactgaagggcgtgacggaccattagagaga
cacctaatttcaaagtctctactaccatttgcaactgagaggggggactcctggttagct
agccttctggagtgggagctgggaaactactgtcaatcttttataaaaatgcttggactc
cagataaattctgcaacggaaatgtatgctactttatccaatggtggtgctttttcagac
ccaaatgttggcctgtattgtcaattgctaacaaccaagaacagcatgaggaatgctata
ggggagcgaaatactgcaatcctcggtaggtgggcagcatttatgacagctagtgcctta
aagagatgtggacttccactcgaagctttggagtacctttcatctcccacaaccaatgtt
ggagacacaaatcaagggactgtatcagatattggagattttgagaagcttcatggaatt
ctgaatccttctccaaagaattcttcatattggttttcaagtaatgtggctttccatctg
gagttccatgcccgattagatttggcacttcaatacttttcaacgttgataagagagcat
ccaagttggccagctactgtttttgcatctttcagagctaattcacatacaaatgagtgc
gagaatcatgaacatgtaatcgttcttcagagtttccgccagaaattactcacagcagtt
catcacttggaacaaaagttttcagtggttgctattgatctgatgagcatggtctacctt
tcactgtacaatcgtgggctatggtttgttggatatgaaatattaaatgcgtatatttct
caagatgaagatctcgataaaagccagatatttagattccaactgtatcctcaaatgcat
aagcaacttttgaaggctacccgagaaacctcccttttatgttcacgcgttattactgcc
tgcggcataacttgctttaaactgaaaccagattgtttagaaaacaatgtgtctggtgat
agtggatgtgcaagcttaaatgctagggagtattattttcaaggtgttatactgtcaatt
cggagtttaaagagtgctttacaaattatttctgtctcatctactgaagacctcatcatg
gaaccccttatcatcattgattggattgagtattttgtacagtttgcttatgcatgggtt
aaaaataactcaaaagctctcttcttattgatccagccacttctgatcacatttaccaat
gggcatacaccttatgaagttgatttgctggatctgaagaaaatccttccccagattgca
gaatcagtggcccaaaattgtttgattgataatgtatgcacaggccttcagggttctcag
ggtacggatgtagtagattcaattccagaggatgaaaggtggcaaatcataggggcttgt
ctatggcaacacatatccagactcatgaaacataagttaggtatgtcatcttataaactt
gaggaaggctgtatttctggtgttacccatggacaaaatatctcacaggtgacttgcttg
gaaaatttgggtcataatgacaacagaatagaagaattgactgggttggtttcattgtct
atggttaagttattgaagaccacacttgcacatgtctcttcttaccatgtgaagcatcta
gcatcacatttgcagcataagattgacactgggtgccatgtaatgactcttatttggtta
gaagaatataaccagtctcagaccagaggcctcaatcagcatttgaatcaggacatgctc
aaattggagagaaaaggtgaaaaacatggatctgacatattatgggatatctgtgcagat
cgtaaaataatatctgagagtttcacccaggaaaaaataaactggtctcactcccttgat
cataaaccgtctaaaggatggagtaacatatgcagaggcatcacattagatgagacagag
gaaactcataattgtgaagttacacctaagagaacttctgccagtagtgaagctggatta
ccttctagaagtctatttcgcagtggccactctttccttgggggatggcataaagataca
acccttacgaaggaggtctcgcctttcctgaacccaaaagaattatataagagaaacggg
gagcttttggaggcattgtgtctcaactcagttaatcggaaacaagctgctcttgcaagc
aacagaaagggcatcctatttttcaattggaaagacgatatgcctaatagagatcattca
gactatatctggtcagaggctgattggccactgaatggttgggctggttttgaaacaacg
ccagctccaacatttgtatctcctggtgttggtcttggaattaaaaaaggatcacacctt
ggactgggaggagcaactgttggtgtgggatctttggcaaggtctgcaaaagacttgaca
ggtggaggagcatttgggaatcaaggttatcctggaatgcgtgtgtctggtttaggttgg
gagacccgagaggactttgaggaggttgttgatccaccacctactgttgagaatgcaaac
acgagggttttttccagtcacccatcgaggcctttcttcttggttggttccagcaataca
tacatttacttatgggagtttggtgaagacaaagcaactgcaacttatggagttctgcct
gctgcaagtgtccctccaccttatgctcttgcatcgatatctgctttgcagtttgatcac
tgtggacacagatttgctactgctgccttggatggaactgtatgcacatggcagctggag
gttggaggaaggagtaatattcgtccaacagaatcatctctgtgctttaacagtcatgca
tcggatgttgcttatgttacatctagcggatcaatcattgctgtggctggatatagctcc
actagtgtcaatgtagtcatatgggatacattggctccacctagtacctcacgagcttcc
ataatctgtcatgaaggtggggcgcgctcgctctctgtattcgataacgatataggaagt
ggatctatttcacctctaattgtgactggtggtaaaggaggtgatgttggactccatgac
ttccggtatattgctactggaaggagtaaaaggcacagacatgttgataaaagcgaacaa
gctgtgaagtcatcatcaaatgattatcatcctggggatggttacagattcggggaacaa
aatcagaatgggatgctatggtacataccaaaggctcactcagggagcgtcaccaagata
tccacaattccaaataccagtttgtttttaacgggaagtaaagatggagatgttaagcta
tgggatgccaaaagggctaagttggtatatcactggccaaaattgcatgagaggcacaca
tttttgcaaccaagctcccgaggttttggtggagtagttcaggctgccgtcacagacata
aaagttgtttcagaaggttttctttcatgtggtggggatggaactgtaaagttagttcac
cttaaagactaccaatattag
DBGET
integrated database retrieval system
