Argentina anserina (silverweed cinquefoil): 126802026
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Entry
126802026 CDS
T10558
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC2A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
aans Argentina anserina (silverweed cinquefoil)
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aans04131
]
126802026
04121 Ubiquitin system [BR:
aans04121
]
126802026
Enzymes [BR:
aans01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126802026
Membrane trafficking [BR:
aans04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
126802026
Ubiquitin system [BR:
aans04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
126802026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
Zn_ribbon_FGT1_2
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
126802026
NCBI-ProteinID:
XP_050385506
LinkDB
All DBs
Position
7:complement(19264258..19267122)
Genome browser
AA seq
388 aa
AA seq
DB search
MSATTSSYWCYRCSRFIGVLSAGDSPVVCPDCGSGFVEETGDPNRSVYVDSRRRVSSAAP
MYMIGANHSSGTNPQSPQPRRHNTGGGGDRINPVIVMRGAESASEEGIGFELFYDDGSGS
GLRPLPNSMSEFLLGAGFDRLLNRLAQMDLNGIGRYDQRPADKSAVESLPTVELKESHVA
DESHCAVCKEAFELGNEAREMPCKHIYHSDCILPWLALRNSCPVCRFELPVDSPEAANQD
VAASEEESAALTIWRLPGGGFAVGRFAAGRRGGGDREMPVVYTEVDGGFNGGAPRRISWS
RNGGRRRQRGGVGRFLRSIFTCFSGSSGSSVVPRRLSSSPVAPISVPEIRPAAVNDRTTR
SSNTERRSSPTQTPRTWSMEVNNGVLTW
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcaacgacgtcgtcttactggtgctacagatgtagcaggttcattggggttttg
agcgccggcgactcaccggtggtgtgtccagactgcggcagcggcttcgtcgaggagacc
ggcgacccgaaccgctccgtctacgtggattctcgccgcagagtgagctccgccgctccg
atgtacatgatcggcgccaaccatagctccggtaccaatcctcaatcgccacagcctcgc
agacacaacaccggcggtggcggagaccggattaatccggtgatcgtgatgcgcggagct
gaatcggcgagcgaggaaggaataggattcgagcttttctacgacgacggatccgggtcg
ggtctccggccgttaccgaatagcatgtcggagtttctactcggcgccgggtttgaccgg
ttgttgaatcggctagcgcagatggatttgaacggaattggccgttacgatcagcgaccg
gcggataaatcggcggtggagtcgctgccgacggtggagctcaaggagtcgcacgtcgct
gacgagtctcactgcgccgtgtgcaaagaggcctttgaattggggaacgaagctcgggag
atgccttgcaagcacatataccactccgattgcattctgccgtggcttgctcttcgaaat
tcgtgtccggtgtgccggttcgaacttccggtcgactctccggaggcggcgaatcaggat
gtggcggcaagtgaggaagagagcgctgctctgactatttggaggctgccgggaggcgga
ttcgcggtggggaggttcgccgcaggcaggagaggcggcggagatagggagatgccggtt
gtgtacacggaggtggacggcgggtttaacggcggcgcgccgaggaggatttcgtggtcg
aggaacggcgggagaagaagacagagaggtggagttggaaggtttctgaggagtatcttc
acttgtttcagcggaagcagtggcagctcagttgtgcctcggcggttgtcttcttctccg
gtggcgccgatttcggtgccggaaataagacctgcggcagtgaacgataggacgacgagg
tcttcgaatacggagaggcgaagctccccgacgcagacgcctagaacttggtccatggag
gttaacaatggagttctcacatggtga
DBGET
integrated database retrieval system
