Argentina anserina (silverweed cinquefoil): 126802630
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Entry
126802630 CDS
T10558
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1B-like isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans04120
Ubiquitin mediated proteolysis
aans04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
126802630
04120 Ubiquitin mediated proteolysis
126802630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aans04121
]
126802630
Enzymes [BR:
aans01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126802630
Ubiquitin system [BR:
aans04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
126802630
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-RING_16
zf-RING_Vps41
zf-RING_11
zf-RING_5
zf-ANAPC11
FlxA
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
126802630
NCBI-ProteinID:
XP_050386235
LinkDB
All DBs
Position
7
Genome browser
AA seq
537 aa
AA seq
DB search
MMRLQTYAGVSLIGTLAIIYHAFSTRGQFYPAMVYLSTSKISLVLLLNMGLVIMCILWQL
TKKLFLGSLREPEVERLNEQSWREVMEILFAITIFRQDFSVSFLAFVTALLLIKSLHWLA
QKRVEYIETTPSVPTLSHVRIVSFLGFLFVVDTLFLYSSVSTIIATQKPSVSLFFAFEYM
ILATTMLSTFVKYVFYVSDMIMDGQWERKHVYTFYLELVRDLLHLSMYLCFFIVIFMYYG
LPVHLIRELYETFRNFKIRVADYLRYRKITSNMNDRFPDATPEELTAGDATCIICREEMT
TAKKLLCGHLFHVACLRSWLERQHTCPTCRALVVPPDGRTGTPRGQGGSHSDAHRQGTGI
SGTTAQGSTSGGVAGANMSHHEARLRAAAAAASVYEKSYVYPSPNRLVWSAGYAALPPAN
HMADSPSTELRSQPQFATPGGPANLSLPQSPQYMFSPFLGANGGRLGSNSDIIASQLEAQ
RKVLQHQIEILQNQLQILQKPKPKESVERGPTVEDSKGKNVEPLSDSDSFPGDDVLY
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggctgcaaacctacgccggggtaagtctgattggaaccctagcgattatttac
catgcatttagcaccagagggcagttttaccctgccatggtttacttatcaacctccaag
atcagtctggtgcttcttctcaacatgggcctcgtcatcatgtgtattctctggcaactc
accaagaagctcttcctcggctcactcagggagcccgaggtcgagaggctcaacgagcag
tcgtggagggaagtcatggagatcctctttgccattactattttcaggcaggacttttcc
gtgtcgtttctcgcctttgttactgctctgctgctgatcaagtccttgcattggttggct
cagaagagggttgagtacattgagactactccatctgtgcccacgctatcgcatgttcgg
attgtgtcctttttgggcttcttgtttgttgtggatactctctttttgtacagctctgtc
agcaccatcatcgccactcagaagccttcggtttccctcttttttgcattcgagtacatg
attctagcaacaacaatgctgtcaacatttgtgaaatatgttttctatgtcagtgacatg
attatggacggacaatgggagaggaagcatgtctacactttttatttggaacttgttcgt
gacttactccacttgtctatgtatttgtgcttcttcatcgtgattttcatgtactatggc
ttgccagtgcacttgattcgtgagctctatgagacgttcaggaactttaagattcgtgtt
gctgattacctccgttatcgaaagatcacttcaaacatgaatgaccgtttcccagatgct
acacctgaagaacttactgcaggtgatgcaacttgcatcatttgccgtgaagagatgaca
acagccaagaaactgttatgtggacaccttttccatgtggcttgcttgcgatcatggtta
gagcgacagcatacctgtcccacatgcagagcccttgttgtacctcctgatggtcggaca
ggtacccctcgaggacagggtggatcacactccgatgctcatcgacaggggacaggcata
tcagggacaactgctcaaggttcaactagtggtggagttgctggtgctaacatgagccat
catgaagcaagactgcgtgccgcagctgcagctgcatcagtatatgagaaatcttatgta
tatccgtctccaaacaggctagtatggtctgctggatatgcggcacttcctccggctaat
catatggcagactccccaagtactgaattacgatcacaaccacagtttgcaacccctggt
ggacctgcaaacttgtcgttgcctcaatctccgcagtacatgttttctcctttcctagga
gccaatggggggagattgggcagtaattctgatataatagcttctcagctggaggcccag
agaaaagttcttcagcaccagattgagatcctgcagaatcagctccaaattttacaaaag
ccaaaacccaaggaaagtgtcgaaaggggaccaaccgtagaagatagcaaaggaaagaac
gttgaacctttgtctgattcagattcttttcctggtgatgatgttctttactag
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