Argentina anserina (silverweed cinquefoil): 126802921
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Entry
126802921 CDS
T10558
Name
(RefSeq) nuclear pore complex protein NUP96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126802921
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aans03019
]
126802921
03036 Chromosome and associated proteins [BR:
aans03036
]
126802921
Messenger RNA biogenesis [BR:
aans03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
126802921
Chromosome and associated proteins [BR:
aans03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
126802921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
126802921
NCBI-ProteinID:
XP_050386592
LinkDB
All DBs
Position
7:7920844..7953238
Genome browser
AA seq
1095 aa
AA seq
DB search
MFSHTSPFTIRHHGGCHTSTAAAQSLSDSTPPQLEPDLFHGGHHKRTLCELYSNIVTCST
MGVDAEARSSLVSCQQKRRRTGVRSVETFGSGNGGSLAYLPTLEAADYYMQPSLAELAAR
EGMDPGYCARVLDFTVGRFGYGAVKYPGETDVRCLDLDKIVKFRRHEVIVYEDESGKPLV
GEGLNKPAEVTLMIQTRLPCVDRRRKENIVKILRQSVEGQGAHFVSFNPGNGEWKFFVNH
FSRFGLSEEDEEDMIMEDTDAAEDPPELNHEEMSEADEGNPMAPTGVVLSHSLPAHLGLD
PIKMQEMRMLMFSDMDEEAEEFKELHAQYNPSSGKEYLTSPLQNAQRMSYRSTPPAVRKT
PLALLEYKNSNFDSNSPGAILMAQENKGLPLKTLKEGFKLDLNRETPVTKKNSRNIVDAG
LLMGRSFRVGWGPNGVLVHTGMPIGGNGSQRVLSSVINIEKVAIDNVVRDENNKVSAELV
ETAITSPLELHKGLFHETKEVEVGSFSLRLQKLVSNRFTLSDICRSYVDIIERQLEVPGL
SSSACLVFTHQIMIWELIKVLFSERENGGKLESGADDEEEMVQDEKPPSHETEPEALPLI
RRAEFSYWLQENVHHRVEEIISLNETNYLESILLLLSARQLDEAVELAASQGDVRLACLL
SQSGGSMVNRSDIAQQLELWRINGLDFSFIEKDRIRLYQLLAGDVHGAFRGIEVDWKRFL
GIMMWYGLAPNTSLQVVFSTYQDLLNENKAPYPVPIYIDGHLEVAVDQSAEKRYDLSYYL
MMLHGNEDSAVDFTKTMFSAFSSTYDPLDYHMIWHQRAVLQAVGVISANDLHVLDMAFVS
QLLCLGQCHWAIYVVLHMSHCEDFPYLHANLIREILFQYCDSWSSLVSQRQFIEDLGIPK
AWLHEAMAVYFNYYGELSKALEHFIECENWQKAHAIFITSVAHTLFLSAEHSEIWRLATS
MEDHKSEIENWDLGAGIYISFYLTTSSLQGADDAMSELDSVDSKNATSREFLGQLNRSLA
VWGARLPMDVRVVYSKMADEICNLLLSDISEGPTRDVQLSCFDTVFSAPIPQDLRSNHLQ
DAVSLFTCFLSEVAT
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgttctctcacacttcgccgttcactatccgccaccatggaggctgccacacctcaacc
gccgccgctcaatccctgtccgattccactccgccacagctcgaaccagacctcttccac
ggcggccatcataagaggacgctttgtgagctttatagtaatattgtgacttgctctacc
atgggagttgatgctgaagctcggagttcgctagtttcgtgtcagcagaagaggagaagg
accggagttcggtcggtggagacttttggtagtggtaatggcggttcgttagcatacctg
ccgactcttgaagcggctgattactatatgcagccttccttggctgaattggctgcgcga
gagggtatggatccgggttattgtgcccgagtgttggactttacggtcgggaggtttggt
tatggagccgtcaagtatcctggggagactgatgttaggtgtttggacttggataaaatt
gtgaagttccggagacatgaggtgattgtgtatgaagacgagagtgggaagcctttggtt
ggcgagggacttaataaacctgctgaagtgactttgatgatacagacaagactgccgtgt
gttgaccggaggcggaaggagaatatagtgaaaatattgagacagagtgtggaggggcaa
ggagctcattttgtttcgtttaatccgggaaatggagagtggaagttctttgttaaccat
tttagtagatttgggttgagtgaagaagatgaagaagacatgataatggaggatactgat
gcagctgaagatcctccggaattgaaccatgaagaaatgtctgaggcggatgaaggaaac
ccaatggctcctactggagttgtgctttcgcattctcttcctgctcatcttgggcttgat
cccatcaagatgcaagaaatgagaatgttgatgttttctgatatggacgaggaagccgag
gagtttaaagaattacatgcacaatataatccatcatctggtaaagaatacttgacatct
cctttgcaaaatgctcaaaggatgagttatcgatctactccaccggccgttcgaaagaca
cctctagcattgcttgaatacaaaaacagtaattttgactcaaactctcctggtgcaatt
ctaatggcacaggaaaataaaggcttgccattgaagacgctaaaagaaggttttaagctt
gatctcaatagagaaacgccagtaactaaaaaaaattctcgtaacatagttgatgcaggt
ttgttaatggggaggtcatttcgagtaggatggggcccaaatggagttcttgtgcatact
ggcatgccaataggcggtaatggttcccaaagggtgctgtcatctgtaattaacatagag
aaggttgctattgacaatgttgtcagagatgaaaataacaaggtttctgcagaacttgtt
gaaacagctatcacttctccattggagcttcacaagggactatttcatgaaacaaaagaa
gttgaagttggatcgttcagtctgagacttcagaagcttgtgtccaatcggtttacacta
tcagatatatgcaggagctatgtagatattattgagagacagctggaggttcctggttta
tcttcctctgcttgtttggttttcacgcatcaaattatgatatgggaattgataaaagtt
cttttctctgaaagggaaaatggaggaaaactggaatctggtgctgatgatgaggaagaa
atggtgcaggatgagaagcccccttcacatgaaaccgaaccggaagcattgcctcttatt
aggagggctgagttcagttactggttgcaagaaaatgtgcaccatcgagtagaagaaatc
atctcattgaatgagacaaattatctagaatccatattattacttctgagtgcgcggcag
ctggatgaagctgtagaattggctgcttctcagggagacgtgagattggcttgtttatta
agtcagtctggtgggtccatggttaatcgttctgacattgcacaacagcttgaactttgg
aggatcaatggactggatttcagtttcattgagaaagataggataaggctttatcagttg
cttgcgggagatgtccatggtgcttttcggggtattgaagttgattggaagaggttttta
gggataatgatgtggtatggcctagcacccaacacttcattacaagttgtttttagcaca
taccaagatcttcttaatgagaataaggctccataccctgttccaatttatattgatgga
cacttagaagtggcggtggatcagagtgcagagaaacgttatgacctatcatattacctt
atgatgctacatggcaatgaagatagtgcagttgatttcacgaagaccatgttcagtgct
ttctcgtccacatatgatccacttgattaccatatgatctggcatcagcgtgctgtgttg
caagcagttggggtcatcagtgccaatgatcttcatgttcttgacatggcatttgtttct
cagttgttgtgtcttgggcaatgccattgggccatctatgtggttcttcacatgtcccat
tgtgaagactttccatatcttcatgctaatcttattcgtgaaattttattccaatattgt
gattcttggagctcactagtatcacaacgccaattcattgaggacttgggtattcctaaa
gcgtggcttcatgaggctatggcagtttatttcaattattatggggaactttcaaaggca
cttgaacactttattgaatgtgaaaactggcaaaaagcgcatgctattttcataacttct
gttgcccacacattattcttgtcagccgaacactcggaaatatggaggctggcaacttcc
atggaggaccacaaatcagaaattgaaaactgggacttgggagctggcatctacatttca
ttctatctaacaacaagttcgttgcagggagctgatgatgccatgagtgaactggattct
gttgacagcaaaaatgctacttccagagagtttcttggtcagttaaaccggtctttggct
gtttggggtgccaggctaccaatggacgtgagagtcgtgtattcaaagatggcggatgag
atatgcaacttgctattgtctgatattagtgagggcccaacacgagatgttcagttaagt
tgctttgacactgttttcagtgcgcccatacctcaagatcttcgctcaaatcatttgcaa
gatgcagtgtcactctttacatgctttctatcggaagttgctacatag
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