Argentina anserina (silverweed cinquefoil): 126803012
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Entry
126803012 CDS
T10558
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
aans Argentina anserina (silverweed cinquefoil)
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aans03021
]
126803012
Transcription machinery [BR:
aans03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
126803012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Nitr_red_assoc
GerE
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
126803012
NCBI-ProteinID:
XP_050386702
LinkDB
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Position
7:23147017..23150210
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AA seq
515 aa
AA seq
DB search
MGVVTVSSSVSRTPLGLSTKLVSSQRSALKKPLIVAFRTDKSNKNALVAPQEKVPLPIET
AKKVRKRLGKARKLPKSVKAALTEEAPTCSLELDYNEAAAKLENLYKRSPETEVLDVENV
DGLMIKRGCKRRKKISEVDDNVENTVVRSTTKKAKRLTLDKRVALKWNKDEKLGASLVRK
RKDKKSENEMMEELVREYSASTDLFSLDWKKMRIPPVLTSSEHNWLFKLMQPMKGLLEVK
EILQKDLGREPNNGELAEATNMSVVQVKKHLEVGRAARNKLVKHNLRLVLFVINKYFQDF
ANGPKFQDLCQAGVKGLITAIDRFEPQRRFRLSTYGLFWIRHAIVRSMTLSSFTRVSFGL
ESVRAEIQKAKLELLVQLKRMPTEVEIIEKVGISPERYYEVMRASKPVFSLNSKHSVTQE
ELINGITDVDGVEGDNRRKPALLRLAIDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIA
GNLNISREMVRKHEVKALMKLKHPARVDYLRRYIV
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgacagtttctagctccgtttctagaactccattaggattgagcacaaaa
ttggtgtcgagtcagagatcagcgttgaaaaagccgttgattgttgcctttagaacagat
aagtccaataaaaatgcgttggttgcgccacaggaaaaagtacctttgccaatagaaaca
gcaaagaaggtccgaaagagactaggaaaggccagaaagctccccaaaagtgtaaaagct
gcattgacagaggaggctcctacttgtagtttggaactggattacaatgaagctgctgcc
aagctggaaaacctgtacaagcgcagccccgagactgaagttttggatgtggaaaatgta
gatggcttgatgatcaagagaggttgcaagaggaggaagaagatcagtgaagttgatgac
aacgtagagaacactgtggttaggagcacaacaaagaaggctaaaagattgactcttgat
aaaagggttgcattgaaatggaataaggacgagaaactgggtgcttcactagttcgaaag
agaaaagataaaaaaagtgagaatgagatgatggaggagcttgtaagggagtattcggct
tcaactgatcttttcagcttagactggaaaaagatgaggattcctcccgttcttacttct
tctgagcataattggttgttcaagctaatgcagcccatgaagggtcttcttgaagtgaaa
gagattttgcaaaaagatttggggagagaaccaaataacggtgaactagctgaggcaaca
aatatgagtgtggtacaagtaaaaaaacacttggaggttggtcgagctgcaagaaacaaa
ctagttaagcacaatctccgacttgtgttatttgtcattaacaaatactttcaagacttt
gcaaatggtccaaaatttcaagacctttgtcaggcaggagtgaagggacttatcaccgca
attgatcgctttgaaccacaaagaagattccggctttccacttatggtcttttctggatc
aggcatgccatcgtacgttccatgacactctcaagctttactcgtgtctcgtttggcctt
gaatcggtaagggcagaaatccagaaagcaaagcttgaattgttggttcagcttaaaaga
atgccaacagaggttgagataattgaaaaggttggaatttcccccgagaggtattatgaa
gtaatgagggcatcaaaacctgtcttctctcttaattccaagcattcagtcacacaagaa
gaacttataaacggtattactgatgttgacggcgttgaaggtgataaccggcggaaacct
gctcttctcaggcttgccattgatgatgtgcttgattccctaaagccaaaagaaagcttg
gtaatcagacagagatacggccttgatggcaagggcgatagaacattaggggagatagct
ggaaacttaaatatttcgagagaaatggttcgaaagcatgaggttaaggcgctcatgaag
ctcaagcatccagcccgagtggactatcttcgcagatacatagtctaa
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