Argentina anserina (silverweed cinquefoil): 126803596
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Entry
126803596 CDS
T10558
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent DNA helicase 2 subunit KU80
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
126803596
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aans03400
]
126803596
DNA repair and recombination proteins [BR:
aans03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
126803596
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Motif
Other DBs
NCBI-GeneID:
126803596
NCBI-ProteinID:
XP_050387336
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Position
7:complement(12427296..12430980)
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AA seq
574 aa
AA seq
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FVLVIDVGPSMHKALPEIEKLCSMLVVKKLVYSKSDEVGVVLFGTEGTENALTTEVGGYD
HITVLQNIKVVDEHLIQAVEQLPRGTHNGDFLDAVIVEMDTLIKKYGETNKGKKHLCLIT
NAHFPXKPPLEGSKEDQVTAIAGHMNTQSMRLESIVIRGLTGEAKKSIVDENDHLLDIFS
KTTCAKLVHVETPTSLLGALRTRKISPVTIFRGDLELTPKMKIKVWVYKKTSEDKFPTLK
KFSDKAPPTDKFATHEVKVDFEYKSAEDLSKVIPPEQRIKGYRYGPQVIPISSAEWDAVK
FKPEKSVKLLGFSDAQNILRHYYMKDVNIFIPEPHNTRAILAVSALAXAMKDTNKVAIVR
CVWRQGQASVVVGALTPNVSDNDNIPESFYFNVLPFAEDVQEFNFPSFNNFPAAWQPNDQ
QQDAADNFVGMFDLVPPGKQELLPPDVVYMQSSHVYDIFRHLELKSRDPDAAVPPVDETL
KKISEPDKELIAENKSIIDAFRSRFDVNNSKEPNKFNDFLRSLCKYCQENYLTSFCEFLA
TKELTLIPKAEAIDIEVTDAEARSFLVKPEPKLE
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
tttgtcttggtgattgatgttggcccgtcgatgcataaagctcttccggagatagagaag
ctttgctctatgctagtggtgaagaagctcgtttacagtaaaagcgatgaagtgggagtt
gttttgtttggaacagaaggcacggaaaatgcgttaacaactgaagtgggtggatatgat
catataacggttctacaaaatatcaaagttgtcgatgagcatcttattcaggctgtagag
caactcccacgaggaactcataatggtgattttcttgatgccgtaattgttgagatggat
acgctgataaagaaatatggagaaacaaacaaaggaaagaaacatctttgtctaattaca
aatgcacacttccctnctaaacctccattagagggaagtaaagaagatcaagttacggcc
attgccggacacatgaatacacaaagcatgagacttgaaagtatagtcataagaggactt
actggggaagcaaagaaaagcatagtggacgagaatgatcatttattggatatattctca
aagacaacatgtgcgaagttagtacatgtcgagactccaacctcgttgctaggtgctctt
cgaactcggaaaatttctcctgttacaatattcaggggtgatcttgagctgacccccaaa
atgaagataaaggtatgggtttacaagaaaacgtcagaagacaagtttcccactctgaag
aaattttctgataaagcccctccaacagataaatttgcgacacatgaagtcaaggtggat
tttgagtataagagtgctgaagatctgagtaaagtcatacctccagaacagaggatcaaa
ggttatcgttatggacctcaagtaattcccatatcatctgctgaatgggatgctgtcaag
ttcaaaccagaaaaaagtgtgaaacttctgggattttctgacgctcagaacatattgcga
cattattacatgaaagatgtaaacattttcattcctgaaccgcataacacaagggccatt
cttgcagtttctgccttggcatgagcaatgaaagatacgaataaggtggcaattgtgcgc
tgtgtttggagacaaggacaagcgagtgttgttgttggggccttgacacccaatgtgtct
gacaacgataatattcctgaatctttttacttcaacgtacttccttttgctgaggatgtt
caagaattcaatttcccgtccttcaataatttcccagcagcatggcaaccaaatgatcag
cagcaagatgctgctgataactttgtggggatgtttgatcttgtaccacctggaaaacag
gagcttttgccgcctgacgtggtgtacatgcaaagctcacatgtatacgatatttttcgt
catctcgagttaaagtcaagggacccagatgcagctgtacctccagtcgatgaaaccctc
aagaagattagtgaaccagataaggagctgattgctgaaaacaagtctattattgatgca
tttcgtagtcgttttgatgttaacaactcaaaggaaccaaacaagttcaatgattttctg
cggtctctgtgcaaatactgccaagagaattacctaaccagtttctgtgaatttcttgca
accaaagaactcaccttgattcccaaggcagaagctatagacattgaagttacagatgct
gaagctagaagctttctggtcaaaccagagccaaagttggaatga
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