Argentina anserina (silverweed cinquefoil): 126804080
Help
Entry
126804080 CDS
T10558
Name
(RefSeq) ATP-dependent helicase BRM
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
aans Argentina anserina (silverweed cinquefoil)
Pathway
aans03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
aans00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
126804080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aans03021
]
126804080
03036 Chromosome and associated proteins [BR:
aans03036
]
126804080
Transcription machinery [BR:
aans03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
126804080
Chromosome and associated proteins [BR:
aans03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
126804080
Chromatin remodeling factors
BAF complex
126804080
PBAF complex
126804080
GBAF(ncBAF) complex
126804080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
QLQ
DEAD
Bromodomain
AAA_14
HDA2-3
Motif
Other DBs
NCBI-GeneID:
126804080
NCBI-ProteinID:
XP_050387802
LinkDB
All DBs
Position
7:14652526..14662936
Genome browser
AA seq
2243 aa
AA seq
DB search
MQAGGGPGRNPAGRATSTSSAASPSSSSSAVSTPHLGFEQQQQQQLGSRQQLQQQFLRKS
EGNEALLAYQAAAFQGAMAGNNFVSAPGSSQMPQQPRTFMDMAQQQGSQDGQNRSQGVDQ
QVLNPVHQAYLQYAFQAAQPKSGLAMQSQQQTKMGMLGPPSGKDQDMRSGNLKMQEFNSM
QTANQAQASSSKNLSSKNSMEHFARGEKQMDQGQPPASDQRSESKPSAQPGTGGQFLPGN
LLRPMMAPQQNMQNMPNNQMALAAQLQAIALENNIDLSQPGVMAQLIPMLQSRIVAQQKA
NEGNMGTQSSSAPVSKQQVTSPQVANEISPRANSSSDVSGQSGSAKAKQPVSPSPFGSGS
SSAMFNNSNNIPMQQFTVHGRENQIPPRQLVPFGNGMVPTNPTHPSTNTSQGVDQSLHVK
NLPNNPESSQMQYPRQLNRSSPQAVVPNDGGSSNHNVQSQGGPAPQVPQQGPGFTKQQLH
VLKAQILAFRRLKKGEGTLPQELLRAIAPPPLEQQLQQQILPGGSIQDKSSGKVVEEHAL
ESHERDSHSQAVASVNGHNISKEEALTGDEKASVSTVHVHGMPAVMKEPTPVVSLGKEHS
TVAPIKSDHEVERGSQKDSVRSDFSGDRGKSVAPQVAVSDAMQLKKPAQASPAAQPKDAG
SVRKYHGPLFDFPFFTRKHDSFGSAMMVNNNSNINNNLTLAYNVKDLLFEEGAEVLNKKR
TENIKKIAGLLAINLDRKRIRPDLVLRLQIEEKKLRLVDFQARLRDEIDQQQQEIMAMPD
RPYRKFVRLCERQRMELARQVQATQKAMREKQLKSIFQWRKRLLEAHWSIRDARTARNRG
VAKYHEKMLREFSKRKDDDRSRRMEALKNNDVERYREMLLEQQTSITGDAAERYAVLSSF
LSQTEEYLHKLGGKITAAKNQQEVEEAANAAAAAARMQGLSEEEVRVAAACAGEEVLIRN
RFIEMNAPRDSSSVNKYYSLAHAVNERVIRQPSMLRTGTLRDYQLVGLQWMLSLYNNKLN
GILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHTWLPSVSCIYY
VGSKDQRSKLFSQEVCALKFNVLVTTYEFIMYDRSKLSKIDWKYIIIDEAQRMKDRESVL
ARDLDKYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSKPFQREAPTP
DAEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGALPPKISIVLRCRMSAIQSAVYD
WIKSTGTIRVDPEDEKLRVQKNPLYQPKVYKTLNNRCMELRKTCNHPLLNYPYFNDFSKD
FLIRSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLE
DRESAIVDFNSPGSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRI
GQKREVKVIYMEAVVDKIPSHQKEDELRTGGTVDSEDDLAGKDRYMGSIESLIRNNIQQY
KIDMADEVINAGRFDQRTTHEERRMTLETLLHDDERYQETLHDVPSLQEVNRMIARSEQE
VELFDQMDEEYDWIEEMTRYDQVPKWLRTSTREVNTVIDSLSKRPSKNTSLGGNVGVEPS
EVGSETEKKRGRPKKKLLSYREVDDETGEYSEASSDERNVHPMHEEEGEVGEMEDDEYSD
AVEETPVEDKEQVEEDGPECDGGYDYPLASVRVGNDLIVEEAASSGSSSDSRRLMQPVSP
VSSQKFGSLSALDGRSGSISKRLPDEVEEGEIVVSGDSHMDHQHSGSWNHDRDDGEDEQV
LQPKIKRKRSLRVRPRHTIERPEEKSGSETQSVQRGDSSLLPFQVDHRSQPHTRGDPEMK
TYAESSALKHEQSDSSSRSRRNLPTRKAASASKLHPSAKSGRLNNISDTADAADHYRENW
EGKIGNTSGTSGYATKMPDIIQRRCKNVISKLQRRIDKEGPQIVPLLTDLWKRIENSGFS
SGLANNIMDLLKIDQRIERLEYSGVMELVFDVQSMLKSSMQYYGFSHEVRTEARKVHDLF
FDILKIAFADTDFREARSALTFSSAVATTNALSPRPGVGQSKRHKLINEVEPDPGPQQKP
QRGPSIGSEDTRVRSHMPQKESRLGSGSGSSRDYQPDDSPLLAHPGDLVICKKKRKDREK
SGVKTRNGPAGPVSPPSMGRNIIRSPGPNSVPRETRSTQQASHSQGWANQPPQSANMGAG
SVGWANPVKRLRTDSGKRRPSHL
NT seq
6732 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccggtggtgggcccggacggaatccggcggggcgggcgacgtcgacgtcgtcg
gcggcctcgccgtcgtcttcgtcctcggcggtgtcgacgcctcacttggggtttgagcag
cagcagcagcagcaattggggtctagacagcaattgcaacagcaatttttaagaaagtct
gaagggaatgaagctcttctagcatatcaagctgctgcttttcaaggagctatggctggg
aacaattttgtttcagctcctggctcctctcaaatgcctcaacaacctaggacgttcatg
gatatggctcagcagcaaggctcacaggacgggcagaataggagtcaaggtgttgaccag
caagtgttaaatccagtccatcaagcatatctgcagtatgcttttcaggctgcacagccg
aagtctggtttggcaatgcaatctcagcagcaaactaaaatggggatgttggggcctcca
tctggaaaggatcaggacatgcgctcgggaaatttaaaaatgcaggaattcaattctatg
cagacagcaaaccaggcacaagcatcatcatctaaaaacttgtcatcaaagaactcaatg
gagcattttgctcgtggagaaaagcagatggaccaaggacagccaccagcttcggaccaa
aggagtgaatctaagccttcagcccagccaggaactgggggacaatttttgcctggaaat
ctcttgaggccaatgatggccccacagcaaaacatgcaaaatatgccaaacaaccagatg
gcattggctgctcagttgcaagcaattgcacttgagaacaatattgatctttcacaacct
ggagtgatggcacagctgattccaatgttgcagtctaggattgttgctcaacaaaaggca
aatgagggcaacatgggtacacaatcatcttctgctccagtatcaaagcagcaggttact
tctcctcaagttgcaaatgaaatttctcctcgtgctaactcatcaagtgatgtttctggc
cagtcaggctctgcaaaagcaaagcagccagtttcacctagcccgtttggctcaggttca
agtagtgcgatgtttaacaatagtaacaacattcctatgcagcagttcactgttcatggt
agagaaaaccagatacctccaaggcagttggttccttttggtaatggaatggttcctacc
aatcccacacacccatctacaaacacaagccaaggtgtcgatcaatctctccatgtgaaa
aatttacccaacaatccagaatcatctcagatgcaataccctaggcagttgaatcgttct
tctccacaagctgtggttcctaatgatgggggttcgagcaatcacaatgttcagtcacaa
ggtggaccggctcctcaggtgccacaacaaggccctggattcaccaaacagcagctgcat
gttctcaaagcacaaatactagcatttaggcgactcaagaaaggtgaaggtacactccct
caagaacttcttcgggctattgctccaccgcctctagagcaacagctgcagcaacaaatt
cttcctggaggaagtattcaggacaaatcttctgggaaagttgtagaagaacatgctctg
gagtcccatgagagagattcacattcgcaggctgtggcctcagtgaatggacataacatt
tcaaaagaggaagctcttacaggagatgagaaagcttctgtatcaacagttcatgtgcat
ggaatgcctgctgtgatgaaggaacctactcctgttgtgtctttgggaaaagagcattct
actgtagctccaattaagtcagatcatgaagttgaacgtggtagtcaaaaagattctgtc
agaagtgatttttctggtgataggggaaagtctgttgcaccacaagttgctgtatctgat
gccatgcaacttaaaaagccggcacaagcaagccccgcagcccagccaaaagatgcgggc
tctgtcagaaagtatcatggaccgctgtttgatttcccctttttcactaggaaacatgac
tcctttggttcagcgatgatggtaaacaacaacagtaatattaataacaatctaacattg
gcatataatgtcaaagaccttctttttgaggaaggtgcagaagtcctaaacaagaagagg
acagaaaatataaaaaagattgctggtctattggcaataaacttagataggaaaaggatt
aggccagatcttgtcttgcgattgcaaattgaagagaaaaagcttcgacttgtggatttt
caggcacgcttgagagatgaaattgatcaacagcagcaagagataatggcaatgccagac
aggccttatcggaagtttgttcgtctttgtgaacggcagcggatggagctagccaggcaa
gtgcaggccactcagaaagctatgagagagaagcaactgaaatctattttccagtggcgt
aagaggcttcttgaagcccactggtccattcgtgatgcaagaactgcacgcaacagagga
gttgccaaatatcatgagaaaatgttgagagagttttcaaaaagaaaggatgatgataga
agcagaaggatggaagcattgaagaataatgatgttgaaaggtacagggagatgttgcta
gaacagcagactagtattacaggggacgcagcagagagatatgctgttctttcctcattt
cttagtcagacagaggaatatcttcataagcttgggggtaaaataacagctgctaaaaat
cagcaggaagtggaagaggcagcaaatgctgcagcagctgctgcacgtatgcagggtctg
tccgaggaagaagttagagtggcagctgcatgtgctggagaggaagtattgattagaaat
cggtttatagaaatgaatgcacctagagacagttcatctgtgaacaagtattatagtctt
gcacatgctgtgaatgagagagtcataagacaaccatcaatgttacggactggaacttta
agagattatcaacttgttgggctccaatggatgctttctctgtataacaacaaattgaat
gggatattggcagatgaaatgggtcttggaaaaactgtacaggtaatggcgttgattgcg
tatctgatggagttcaaggggaattatggaccacatcttataattgttccaaacgctgtt
ttggtaaactggaagagtgagttgcatacttggcttccatctgtctcctgtatttattat
gttggaagcaaggatcaaagatcaaaattgttttctcaagaggtttgtgccttgaagttt
aatgtccttgtgacaacttatgagttcatcatgtatgatcgctccaaactgtcaaaaatt
gattggaaatatataataattgatgaagcacaaaggatgaaagatagggaatcggttcta
gctcgtgatcttgataagtatcgttgccaacgacgcttgcttttgacaggaacaccattg
cagaatgatttgaaggaactctggtcacttttaaatctgcttcttccagaagtatttgat
aatcgcaaagcatttcatgactggttttctaaaccgtttcaaagggaggctcctacacca
gacgcagaggatgattggcttgagactgaaaaaaaggtcatcattattcatcgactccat
caaatattagagccgtttatgcttaggcggcgagttgaagatgtcgaaggcgcacttcca
cctaagatctccatagttttaaggtgtagaatgtcggctattcaaagtgctgtatatgat
tggataaaatcaacaggcaccattcgagttgatcctgaagacgagaagttaagggtccaa
aaaaatccactctatcagccgaaggtgtataagaccttaaacaataggtgtatggaactg
cggaaaacttgcaatcatcctcttcttaattacccatacttcaatgatttttcaaaggat
tttctcataagatcctgtggaaaattgtggatcttggataggatcctaattaaacttcag
agaacagggcatagagtacttcttttcagtaccatgacaaaactccttgatatattggag
gaatacttgcagtggaggcgacttgtatacagaagaattgatggaacaactagtttagaa
gatcgtgagtcagctatagtcgatttcaacagccctggttcggactgcttcatcttcttg
cttagtattcgtgcagctggtcggggtcttaatctccagtctgcagatacagttgtcata
tatgatcctgatccaaatcctaaaaatgaagaacaggcagttgctagagcccaccgtatc
ggacagaagagggaagtgaaagtcatttatatggaagcagttgttgacaaaatccccagc
catcagaaagaggatgaactaagaacgggaggcactgttgattcagaggatgaccttgct
ggtaaggatcgatatatgggatcaattgagagcctcataagaaataatattcaacaatac
aaaatagacatggctgatgaggttatcaatgctgggcgttttgaccaaagaactactcat
gaagagcgacggatgacactggaaactttactgcatgatgacgagaggtatcaagaaact
ctccatgatgttccttcattgcaggaggtaaatcgcatgattgctagaagtgaacaagaa
gttgaattgtttgatcaaatggatgaagaatatgactggattgaggagatgacgaggtat
gatcaggttcccaaatggcttcgtactagtacaagagaagtaaatactgtgattgatagt
ttatcgaaacgaccatcaaagaacacttcgttgggtggaaatgttggtgttgagccaagt
gaagtgggatctgaaaccgaaaaaaagaggggtcggcccaagaaaaagcttctcagctat
agggaagtagatgatgagactggagaatactcagaagcaagttctgatgagcgaaatgta
catccaatgcatgaagaggaaggagaagtaggagaaatggaagatgatgaatatagtgat
gctgttgaagaaactccagttgaagataaggaacaggtggaagaagatggtcctgaatgt
gatggtgggtatgattatccactggcttcagttagagttggaaatgacctcatagtagaa
gaagctgcttcctcaggttcatcatcagacagtcgaagattaatgcagccagtttctcct
gtttcctctcagaaatttggttccctgtctgccttagatggtaggtcaggatctatttca
aagaggctgccagatgaagtagaggaaggggaaattgttgtatccggagattctcacatg
gaccaccaacattctggaagttggaatcatgaccgggatgatggtgaagatgaacaggtg
ttgcaacctaagatcaagaggaagcgtagtcttagggttcggcctcgtcataccatagaa
agacccgaagagaagtctggtagtgagacacagtctgtccaacgtggagattcatccttg
ttacctttccaagtggaccatagatctcaaccacatacaaggggtgatcctgaaatgaaa
acatatgcagaatccagtgctttgaagcatgaacaaagtgactcatcctcaagaagtcgt
cgaaatttgcctacaaggaaagctgctagtgcatcaaaattgcacccttcagccaaatct
ggcagattgaataacatatctgatactgcagatgctgctgatcactacagagaaaattgg
gaagggaaaattgggaatacaagtgggacttccggttatgctacaaaaatgcctgacatc
atacagagaaggtgcaagaatgtaattagcaagctccagaggagaatagataaggaaggt
cctcaaatagtacctttactcacagatttgtggaagcggattgaaaattctggtttttca
agtggattggcaaataacatcatggatttactaaaaattgatcagcggatagagcggtta
gagtatagtggagtgatggagcttgtttttgatgtccagtctatgttgaaaagttcaatg
cagtattatgggttctcgcatgaggtacgaactgaagccaggaaagtacacgatcttttc
tttgatatcttaaagattgcgtttgctgacaccgactttcgagaagccagaagtgctctc
acttttagcagtgcagttgcgaccaccaatgctctgtcgccaaggccaggtgttggacaa
agcaagagacacaaattgataaatgaagtggaacctgaccctggccctcaacagaaacca
cagcggggacctagtattggtagtgaagatacaagggtaagaagccatatgccccagaag
gaatcaagacttggaagtggaagtggtagtagtcgggactatcagccagatgattctccg
ctgcttgctcatccgggagatctggttatttgcaagaagaagagaaaagacagggaaaag
agtggggtaaagactaggaatggacctgctggccctgtctcaccccctagcatgggtcgc
aatattattagaagtcccgggccaaattcagtcccaagggagacgagatcaacccagcag
gcatcacattcacaagggtgggccaaccagcctccccagtctgcaaacatgggtgcagga
tcagttggttgggcgaatccggtaaagaggttaaggacggattctggaaagagaaggcca
agccatttatga
DBGET
integrated database retrieval system
