Comamonas antarctica: HUK68_02005
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Entry
HUK68_02005 CDS
T07217
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
aant
Comamonas antarctica
Pathway
aant00521
Streptomycin biosynthesis
aant00523
Polyketide sugar unit biosynthesis
aant00525
Acarbose and validamycin biosynthesis
aant00541
Biosynthesis of various nucleotide sugars
aant01055
Biosynthesis of vancomycin group antibiotics
aant01100
Metabolic pathways
aant01110
Biosynthesis of secondary metabolites
aant01250
Biosynthesis of nucleotide sugars
Module
aant_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
aant00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HUK68_02005 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HUK68_02005 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
HUK68_02005 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HUK68_02005 (rfbB)
00525 Acarbose and validamycin biosynthesis
HUK68_02005 (rfbB)
Enzymes [BR:
aant01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
HUK68_02005 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
3Beta_HSD
adh_short
Motif
Other DBs
NCBI-ProteinID:
QKV51769
UniProt:
A0A6N1WX30
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All DBs
Position
427228..428289
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AA seq
353 aa
AA seq
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MILVTGGAGFIGANFVLDWLATNEEPVVNIDKLTYAGNLHNLASLKGDARHVFVQGDIGD
SALLSRLLQEHRPRAVVNFAAESHVDRSIHGPEDFIQTNVVGTFRLLESVRGYWNALPDA
EKQGFRFLHVSTDEVYGSLAADAPAFTEDHLYEPNSPYSASKAASDHLVRAWHHTYGLPV
LTTNCSNNYGPLHFPEKLIPLMIVNALAGKPLPIYGDGMQVRDWLYVKDHCSAIRRVLEG
GRLGETYNVGGWNEKPNVEIVNTVCALLDELRPRADGQSYAGQITYVKDRPGHDRRYAID
ARKLERELGWKPAETFESGIRKTVQWYLENPEWVAQVQSGAYRDWVQTQYASA
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgattctcgtcacaggcggcgcaggttttatcggtgccaatttcgtactcgactggctt
gccaccaacgaagagcccgtcgtcaacatcgacaaactgacttatgccggcaatctgcat
aatctggcgagcctgaagggcgacgcgcggcatgtcttcgtgcaaggcgacatcggcgac
agcgcgctgctgtcgcggctgctgcaggaacaccgtccgcgtgcggtggtgaatttcgcc
gccgaaagccatgtcgatcgatccatccacggccccgaggatttcatccagaccaatgtg
gtcggtaccttccggctgcttgagtccgtgcgtggctactggaatgcgctgcccgacgcg
gaaaaacagggctttcgttttctgcatgtctccaccgacgaggtctacggctcgctcgct
gccgacgcgccggcgttcaccgaagaccatctctacgagcccaacagcccgtattccgcg
agcaaggccgccagcgaccacctggtgcgcgcctggcaccacacctacgggctgccggtg
ctgaccaccaactgcagcaacaattacggcccgctgcacttcccggaaaagctcatcccg
ctgatgatcgtcaacgcgctggctggcaaaccgctgccgatctacggcgacggcatgcag
gtgcgcgactggctttacgtcaaggaccattgcagcgccatccgccgcgtgctcgagggg
ggacgcctgggcgagacctacaacgtcggcggctggaacgagaagcccaatgtcgagatc
gtcaacaccgtctgcgccctgctcgacgaactgcgtccgcgtgccgacggccagagctat
gctggccagatcacctatgtcaaggaccggccgggccatgaccgccgctatgcgatcgac
gcgcgcaagctcgagcgcgagctgggctggaagccggccgagaccttcgagtcgggcatc
cgcaagaccgtgcagtggtacctggagaatcccgaatgggtggcgcaggtgcaaagcggc
gcctaccgggattgggtgcagacccaatacgccagcgcatga
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