Comamonas antarctica: HUK68_02220
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Entry
HUK68_02220 CDS
T07217
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
aant
Comamonas antarctica
Pathway
aant00300
Lysine biosynthesis
aant00470
D-Amino acid metabolism
aant01100
Metabolic pathways
aant01110
Biosynthesis of secondary metabolites
aant01120
Microbial metabolism in diverse environments
aant01230
Biosynthesis of amino acids
Module
aant_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
aant00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HUK68_02220 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HUK68_02220 (dapF)
Enzymes [BR:
aant01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
HUK68_02220 (dapF)
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
QKV51810
UniProt:
A0A6N1X227
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Position
471655..472524
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AA seq
289 aa
AA seq
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MQIRFTKMQGAGNDFVVLDETRGLLGLSPAQYRFLADRHFGVGADQILSVRPAPEAGIDF
EYAIHNADGGEVEQCGNGARCFARYVHDRGLTDKSVIRVKTLSGVIAPELVADGRVRVDM
GRPELRPAQVPFDAAGLAPRSEGAAQLWPLLLDDASTQWVMPVSMGNPHAVLWVDDADTA
PVAVLGPQIERHPRFPQRVNAGFLQRLSRSEVRLRVFERGAGETLACGTGACAAVVAGIR
QGLLDTQVQVHTRGGLLGIAWSGNDADSVFMTGPATFVFDGQIEIPEAP
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatccgcttcaccaagatgcagggcgcgggcaacgactttgtcgtgctcgatgaa
acccggggcctgctgggcctgtcgcctgcccagtaccgtttcctggccgaccgccacttc
ggcgtcggcgccgaccagatcctcagcgtccggcccgcgccggaggccggcatcgatttc
gaatacgcgatccacaacgccgatggcggcgaggtggagcagtgcggcaatggcgcgcgc
tgctttgcgcgctatgtgcacgaccgcggcctgaccgacaagagcgtgatccgcgtcaag
acgctttccggcgtgatcgcgcccgaactcgtggccgatggccgggtgcgcgtcgacatg
ggccggcccgagctgcggcccgcgcaggtaccgttcgatgccgcgggcctcgcgccgcgc
agcgagggcgcggcgcagctgtggccgctgctcctggacgatgcatcgacgcagtgggtg
atgccggtatcgatgggcaatccccatgccgtgctctgggtcgacgacgcggataccgcg
cccgttgccgtgctgggcccgcagatcgagcgccatccgcgctttccccagcgcgtcaac
gccggcttcctgcagcgcctgagccgcagcgaagtgcggctgcgcgtgttcgagcgcggc
gcgggcgagacgctggcctgcggcacgggcgcctgcgcggccgtcgtggccggcatccgc
cagggcctgctcgatacgcaggtgcaggtgcatacgcgcggcggcctgctgggcattgcc
tggtccggaaacgacgccgacagcgtcttcatgaccggccctgcgacctttgtttttgac
ggacagattgaaattcccgaagcaccatga
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