Comamonas antarctica: HUK68_03095
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Entry
HUK68_03095 CDS
T07217
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aant
Comamonas antarctica
Brite
KEGG Orthology (KO) [BR:
aant00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aant03032
]
HUK68_03095
03400 DNA repair and recombination proteins [BR:
aant03400
]
HUK68_03095
Enzymes [BR:
aant01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HUK68_03095
DNA replication proteins [BR:
aant03032
]
Prokaryotic type
DNA Topoisomerases
HUK68_03095
DNA repair and recombination proteins [BR:
aant03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HUK68_03095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
AbiEi_3
Motif
Other DBs
NCBI-ProteinID:
QKV51966
UniProt:
A0A6N1X1X6
LinkDB
All DBs
Position
complement(658641..659681)
Genome browser
AA seq
346 aa
AA seq
DB search
MAKLIYVDEQTEGWRRMRRGKGFSYVAQDGSSIRDPEQLARIRKLAIPPAYTDVWICPDP
LGHLQATGRDARGRKQYRYHALWQEQQKQAKFERMLEFGRRLPAIRRAVERDLAQRRPGL
ELVAAAVVRLLDRTGMRIGNDEYSQQNGSYGLTTLKNRHAKASATQLTLHFKGKSGVMQQ
VAVADRRVARIVQRCQELPGQRLFQFLGEQDELQHLRSDHVNDYLRSLAGEDFTAKDFRT
WHASVCAMELALQARAANAEAGRLGEPAIADIVKQVAQRLGNTSAVCRKFYIHPEVLSYC
AREAESGSRATRKKVGLSATECALLQLLDTCKPVVRRKAAPALAAA
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggccaagctgatctatgtcgacgagcagaccgaaggctggcgccgcatgcgccgcggc
aagggcttttcctatgtcgcgcaagacggcagcagcatccgcgacccggagcagctggca
cgcatccgcaagctggcgattccgccggcctataccgatgtctggatctgccccgatccg
ctgggccatctgcaggccacgggccgcgacgcgcgcgggcgcaagcagtaccgctaccac
gcgctgtggcaggagcagcagaagcaggccaagttcgagcgcatgctggagttcggccgg
cgcctgccggcgatccgccgcgcggtggagcgcgatctcgcgcagcgccggcccgggctg
gagctggtggcggcggcagtggtgcggctgctcgaccgcaccggcatgcgcatcggcaac
gacgagtactcgcagcagaacggctcctacggcctgaccacgctgaagaaccgccacgcc
aaggccagcgccacccagctcacgctgcatttcaagggcaagagcggcgtcatgcagcag
gtggcggtggcggaccggcgcgtggcgcgcatcgtgcagcgctgccaggaactgccgggc
cagcggctgttccagttcctcggcgaacaggacgagttgcagcatctgcgctcggaccat
gtgaacgactacctgcgctcgctggccggcgaggatttcaccgccaaggatttccgcacc
tggcatgcgagcgtctgcgccatggaactcgcgctgcaggcgcgcgcggccaatgccgag
gccgggcgcctgggcgagccggcgattgcggacatcgtcaagcaggtcgcgcagcgcctg
ggcaataccagcgcggtgtgccgcaagttctacatccaccccgaagtgctgagctattgc
gcccgcgaggccgaaagcggctcgcgcgccacgcgcaagaaggtggggctcagcgccacc
gaatgcgcgctgctgcagttgctagacacctgcaagcctgtggtgcgccgcaaggccgcg
ccggcgctggcggccgcatga
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