Comamonas antarctica: HUK68_04275
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Entry
HUK68_04275 CDS
T07217
Symbol
pgaA
Name
(GenBank) poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA
KO
K11935
biofilm PGA synthesis protein PgaA
Organism
aant
Comamonas antarctica
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Gene cluster
GFIT
Motif
Pfam:
PgaA_barrel
TPR_19
TPR_16
OMP_b-brl
TPR_14
Motif
Other DBs
NCBI-ProteinID:
QKV52177
UniProt:
A0A6N1WYT3
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Position
914749..917049
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AA seq
766 aa
AA seq
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MRTSACSFEVPFRVRVALAATLLALAGMASGAPQPAASELPAARDALLAQAQGQRDARDW
PLALHSFRLGRERYPQDLAFQWGEIQTLADGGQSAEAVALAQQLLERRPDDPDTLLVMGY
AQLRHAGVYASLEYVDRAMQHAGERPYVVREYLLALQRAHLADAALEIARQRPGLLSAQQ
QWELEADAAAENVRHAALPARGEAERFDAADRALARYDALLAQWRSAGNVPAALVQRVRI
DRLQALHARSRMQELVDEYEALVAEGAEVPVYALGDVASAYLYLKQPQRAAALYRQLIAA
NYLRHEVSARQDQDFGLQYAYADQGEFEAARQSAHAVAAQQPPWRTLEGDKEATPNPAYL
DARHMAAMMDFYAGDTPGAQRALERLVAAAPTRSHLRVDLATVYAARGWPRKGEIELKIA
EAHDPRDVGLETAQGQVALDLQEWRQARELSADTLARYPENQRAQRLARQWRAHDSAELQ
LALSKGLGNDNPIAGGRDLGAEATLYSRPLAENWRLLAGLGQRRGNFSDGRAQHNFVRAG
LEWRSRDWTVLGELAENHFSHGGRTGGGIGVNYQIDDAWSLQAGAQRLARDTPLQALRNN
ITSDRLDLGVRWRQSERRQWSFSASPSNFSDGNRRRSLLLSGQERLVTRPNWYLDAGVEI
YATRNRRNDVAYYSPLSERSLLPSLRWNHTLRQDSARAWTQFAGIGLGGLTQQGYGGSAL
GVLSYGQRYRINDLFEVGGTLSAISRSYDGRREREWRIAFDLNQRF
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacatctgcctgttccttcgaagtcccgttccgcgtgcgcgttgccctggcggcc
accttgctggcgctggcgggcatggcgtcgggagcgccgcagcccgcggcttccgagctg
ccggcggcgcgcgacgcgctgctggcgcaggcgcaaggccagcgcgatgcgcgcgactgg
ccgctggcactgcacagctttcgcctgggccgcgagcgctatccgcaggacctcgcgttc
cagtggggcgagatccagacgctggccgatggcggccagagcgccgaggccgtcgcgctc
gcgcagcagttgctcgagcgccggcccgacgatcccgacacgctgctggtgatgggctat
gcgcagctgcgccatgcgggcgtgtatgcgtcgctggagtatgtcgaccgcgccatgcag
cacgctggcgagcggccgtatgtggtgcgcgaatacctgctggcgctgcagcgcgcccat
ctcgcggacgcggcgctggagatcgcgcgccagcggccagggctgttgagcgcgcagcag
caatgggagctcgaggccgatgccgcggccgagaatgtgcgccatgcggcgttgccggcg
cgcggcgaggccgagcgcttcgacgccgccgaccgcgcgctggcgcgctacgacgcgctg
ctggcgcagtggcgcagcgccggcaatgtgccggctgcgctggtgcagcgcgtgcgcatc
gaccgcttgcaggcgctgcatgcgcgctccaggatgcaggagctggtcgatgaatacgag
gcgctggtggccgaaggcgccgaggtgccggtctatgcgctgggcgatgtcgcctcggcc
tacctgtacctgaagcagccgcagcgcgcggccgcgctgtaccgccagctgatcgccgcc
aactacctgcgccatgaggtgagcgcgcgccaggaccaggacttcggcctgcagtatgcg
tatgccgaccagggcgaattcgaggccgcgcgccagtcggcgcacgcggtggcggcgcag
cagccgccctggcgcacgctcgaaggcgacaaggaggccacgcccaatcccgcctatctc
gatgcccggcacatggcggccatgatggacttctacgccggcgatacgcccggcgcgcag
cgggcgctcgaacgcctggtggccgcggcgccgacgcgcagccatctgcgcgtcgatctc
gccacggtctacgccgcgcgcggctggccgcgcaagggcgagatcgagctgaagatcgcc
gaagcccatgatccgcgcgacgtgggcctggagacggcccaggggcaggtcgcgctggac
ctgcaggaatggcgccaggcgcgcgaactgagcgccgacacgctggcgcgctaccccgag
aaccagcgcgcgcagcgcctggcgcgccagtggcgcgcgcatgactcggccgaactgcag
ctggcgctcagcaagggcctgggcaacgacaacccgattgccggcggccgcgacctgggc
gccgaggccacgctctactcgcggccgctggccgagaactggcggctgctggcgggcctg
ggccagcgccgcggcaacttcagcgacggccgcgcgcagcacaacttcgtgcgcgccggg
ctcgaatggcgcagccgcgactggaccgtgctgggcgaactcgcggaaaaccatttcagc
catggcggccgcaccggcggcggcatcggcgtcaactaccagatcgacgacgcctggtcg
ctgcaggccggcgcgcagcggctcgcgcgcgacacgccgctgcaggccctgcgcaacaac
atcaccagcgaccggctggacctgggcgtgcgctggcgccagagcgagcgccggcaatgg
agcttctcggcctcgccctcgaacttcagcgacggcaaccgccgccgctcgctgctgctc
agcggccaggagcgcctggtgacccggccgaactggtacctcgatgccggcgtcgagatc
tacgccacgcgcaaccggcgcaacgacgtggcttattacagcccgctctccgagcgcagc
ctgctgccctcgctgcgctggaaccacacgctgcgccaggactccgcgcgggcctggacg
cagttcgcgggcatcggcctgggcggcctgacccagcagggctacggcggcagtgcgctg
ggcgtgctcagctacggccagcgctaccgcatcaacgatctcttcgaggtcggcggcacg
ctgtcggcgatctcgcgcagctatgacggccggcgcgagcgcgaatggcgcattgcattc
gacctgaaccaacgcttctga
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