Comamonas antarctica: HUK68_08905
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Entry
HUK68_08905 CDS
T07217
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
aant
Comamonas antarctica
Pathway
aant03030
DNA replication
aant03430
Mismatch repair
aant03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aant00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HUK68_08905 (dnaQ)
03430 Mismatch repair
HUK68_08905 (dnaQ)
03440 Homologous recombination
HUK68_08905 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aant03032
]
HUK68_08905 (dnaQ)
03400 DNA repair and recombination proteins [BR:
aant03400
]
HUK68_08905 (dnaQ)
Enzymes [BR:
aant01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HUK68_08905 (dnaQ)
DNA replication proteins [BR:
aant03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HUK68_08905 (dnaQ)
DNA repair and recombination proteins [BR:
aant03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HUK68_08905 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QKV52997
UniProt:
A0A6N1X162
LinkDB
All DBs
Position
1857235..1857945
Genome browser
AA seq
236 aa
AA seq
DB search
MSRQIVLDTETTGLSAENGDRIIELGCVELLNRKLTGNNLHMYFNAGRDSHEDALRVHGI
TTEFLKDKPRFEQQVEQILGYLQGAEIIIHNAPFDVGFLNKELERAGKPPLRSWVDGVID
TLAMAKERYPGKRNSLDSLCDRLGVDNSGRTLHGALLDAELLADVYINLTRGQDALLISD
DAQEDDSGLPIVALDLRSIVLPVIRASEQECAEHEAVLAQIDKASGDKTIWRHMAG
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgccagatcgtccttgataccgaaaccacgggcctgtcggccgagaacggcgac
cggatcatcgaactcggctgtgtggagctgctcaaccgcaagctcaccggcaacaacctg
cacatgtacttcaacgccgggcgcgacagccatgaagacgcgctgcgggtgcacggcatc
accaccgagttcctcaaggacaagccgcgcttcgagcagcaggtcgagcagatcctcggc
tacctgcagggcgccgagatcatcatccacaacgcgccgttcgacgtcggcttcctgaac
aaggagctcgagcgcgcgggcaagccgccgctgcgcagctgggtcgatggtgtcatcgac
accctggcgatggccaaggagcgctaccccggcaagcgcaattcgctcgattcgctgtgc
gaccgtctgggcgtcgacaactcgggacgcacgctgcacggcgcgctgctcgacgcggaa
ctgctggccgatgtctacatcaatctcacgcgcggccaggacgcgctgctgatcagcgac
gacgcgcaagaggatgattcgggcctgcctatcgtcgcgctggacctgcgcagcatcgtg
ctgccggtcatccgggcgagcgagcaggagtgcgcggagcacgaagccgtgctggcgcag
atcgacaaggccagcggcgacaaaacaatttggcgccacatggccggatag
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