Comamonas antarctica: HUK68_09960
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Entry
HUK68_09960 CDS
T07217
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
aant
Comamonas antarctica
Pathway
aant03030
DNA replication
aant03430
Mismatch repair
aant03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aant00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HUK68_09960 (dnaE)
03430 Mismatch repair
HUK68_09960 (dnaE)
03440 Homologous recombination
HUK68_09960 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aant03032
]
HUK68_09960 (dnaE)
03400 DNA repair and recombination proteins [BR:
aant03400
]
HUK68_09960 (dnaE)
Enzymes [BR:
aant01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HUK68_09960 (dnaE)
DNA replication proteins [BR:
aant03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HUK68_09960 (dnaE)
DNA repair and recombination proteins [BR:
aant03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HUK68_09960 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QKV53185
UniProt:
A0A6N1X5V6
LinkDB
All DBs
Position
complement(2098844..2102380)
Genome browser
AA seq
1178 aa
AA seq
DB search
MFVHLRLHSEFSVVDGTTRINAIVKAAAADGQPAMAITDYNNMFGAIKFYKEGRGKGVKP
VLGTEIQLEGEDGAAPSRVILLVQNKAGYHNLCELLARGWTRNVVKSQAVYTWEWLQELG
EGLILLSGAQAGPVGQALLRGDTAGASAMALRLAKLFPHRFYIELQRAGRPDDEPHVLAA
VQLAARLNLPVVATHPIQFATADDYEAHEARVCIAEGEILGNPKRVRRFTREQHFKTQVE
MQALFADLPSALENSVEIARRCSLTLVLGQPQLPNFPVPEGMTMESFFRQESFDGLEVRL
ALLYPDVARRDAERPRYVERLEFELATILKMGFPGYFLIVGDFIKWAKNNGCPVGPGRGS
GAGSLVAYVLNITDLDPLEYNLLFERFLNPERVSMPDFDIDFCQSNRDRVIDYVKQRYGR
DAVSQIATFGTMAARAAIRDVGRVLDMSYMFCDGISKLIPNKPGLHVTLKYPPNPKKDGD
KYTYAIEAEPMLAERIEKEEDVKTLIEMAQRLEGMTRNIGMHAGGVVIAPGRLSDFCPLY
QQPGSDSAVSQFDKDDVESIGLVKFDFLGLATLTILEIAREFIVKRHKGQEDFAYERIPL
DDYPTYKLFSEGKTEAVFQFESRGMQGMLRDAKPSRLEDLIALNALYRPGPMDLIPSFVA
RKHGREVVEYPHPMVEKVLAETYGIMVYQEQVMQTAQVLGGYSLGGADLLRRAMGKKKAD
EMAKHRELFREGAAKNGLDQQRADEVFDLMEKFAGYGFNKSHAAAYSLLAYHTGWLKVHY
TAEFFCANMTVEMDDTDKLKVLYEDALKMGLTFEPPDVNRGRYRFEPVTDKVIRYGLGAV
KGGGQAAIEAIVAAREGVGTGPRGSEKGPFKSLFDFCVRVDRTRLNKRTLEALIKAGAFD
AIHQNRAALVASIDTAFEFANATHANANQGGLFDMMGDDAVGSSTQEPELAERLPWGIKE
RLTFEKTAVGFYLSGHLFDEVESEVRRFVRTRIEEMRDSREPQVMAGIISDFRAISGQRG
RLGLFKIDDKSGVIEASADEGVLNAHKDLLKEDEFVVVSGRLQLDHFSGGLRMKVQQLWS
LSDARCKFGRYLQVSVGEVMPDVIRVLGDFPARRVEQEQAEPLVHGLRVRLGLRCESPQG
AATAELQLGDTSRFYPSDAALAAWSAQAGSGKAVVIYE
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttcatttgcgcctgcactccgagttctccgtcgtcgacggaaccacccgtatc
aacgccatcgtcaaggccgccgcggccgacgggcagccggcaatggccatcaccgactac
aacaacatgttcggtgcgatcaagttctacaaggaaggacggggcaagggtgtcaagccc
gtgctgggcaccgagatccagctggaaggcgaggacggcgccgcgccttcgcgcgtgatc
ctgctggtgcagaacaaggccggctaccacaacctgtgcgaactgctggcgcgcggctgg
acgcgcaacgtcgtcaagtcgcaggcggtctatacctgggaatggctgcaggagctgggc
gagggcctgatcctgctgtcgggcgcgcaggccggccccgtgggccaggccctgctgcgc
ggcgacaccgcgggtgcgtcggcaatggcgctgcgattggcaaaactgtttccccatcgc
ttttacatcgagttgcaacgggcgggccgaccggacgatgagccgcatgtgcttgccgcg
gtgcaattggccgcgcggctgaacctgcccgtggtcgccacccatccgatccagttcgcg
acggccgacgactacgaagcccatgaagcacgcgtttgcattgccgagggcgagatcctg
ggcaaccccaagcgcgtgcgccgcttcacgcgcgaacagcatttcaagacccaggtcgag
atgcaggccttgtttgccgacctgccgtcggcgctggaaaacagcgtcgagatcgcgcgc
cgctgcagcctgacgctggtgctgggccagccgcagctgccgaacttccccgtgcccgag
ggcatgaccatggagtcgttcttccgccaggaatcgttcgatggtctcgaagtgcggctg
gcgctgctgtatcccgatgtcgccaggcgcgatgccgagcggccgcgctatgtcgagcgc
ctggagttcgagctggccaccatcctgaagatgggcttcccgggctacttcctgatcgtg
ggcgacttcatcaagtgggccaagaacaatggctgcccggtgggtccgggccggggttcg
ggcgcgggctcgctggtggcctatgtgctcaacatcaccgacctcgatccgctggaatac
aacctgctgttcgagcgcttcctcaatcccgagcgcgtgtcgatgcccgacttcgacatc
gacttctgccagtccaatcgcgaccgcgtcatcgactacgtcaagcagcgctatggccgc
gacgcggtgagccagatcgcgaccttcggcaccatggccgcgcgcgcggccatccgcgac
gtgggccgcgtgctcgacatgagctacatgttctgcgacggcatctccaagctgatcccg
aacaagcccggcctgcatgtcacgctcaagtacccgccgaatccgaagaaggacggcgac
aagtacacctacgcgatcgaggccgagccgatgctggccgagcgcatcgagaaggaagag
gacgtcaagacgctgatcgagatggcgcagcgcctcgagggcatgacgcgcaatatcggc
atgcacgccggcggcgtggtgatcgcgccgggccggctgtccgatttctgcccgctgtac
cagcagcccggcagcgactccgccgtgagccagttcgacaaggacgacgtcgagtccatc
ggcctggtgaagttcgacttcctgggcctggcgacgctgaccatcctggagatcgcgcgc
gaattcatcgtcaagcgccacaaggggcaggaagacttcgcctacgagcgcattccgctg
gacgattacccgacctacaagctgttctccgagggcaagaccgaggccgtgttccagttt
gaaagccgcggcatgcagggcatgctgcgcgacgccaagccgagccgcctcgaggacctg
atcgcgctcaacgcgctctaccgtccgggcccgatggacctgattcccagcttcgtggcg
cgcaagcatggccgcgaggtggtcgagtacccgcatcccatggtcgagaaggtgctggct
gaaacctacggcatcatggtctaccaggagcaggtgatgcagaccgcccaggtgctgggc
ggctactcgctgggcggcgccgacctcttgcgccgcgcgatgggcaagaagaaggccgac
gagatggccaagcaccgcgagctgttccgcgaaggcgcggccaagaacgggctcgaccag
caaagggccgacgaggtcttcgacctgatggagaagttcgcgggctacggcttcaacaag
tcgcacgccgccgcctactcgctgctggcctaccacaccggctggctcaaggtgcactac
acggccgagttcttctgcgccaacatgaccgtggaaatggatgacaccgacaagctcaag
gtgctctatgaagacgcgctgaagatgggcttgaccttcgagccgccggacgtcaaccgc
ggccgctaccgcttcgagccggtcaccgacaaggtcatccgctacggcctgggcgccgtg
aagggcggcgggcaggccgcgatcgaggccatcgtggccgcgcgcgaaggcgtgggcacg
ggcccgcgcggcagtgagaaggggccgttcaagagcctgttcgacttctgcgtgcgcgtg
gaccgcacccgcctgaacaagcgcacgctcgaagccctgatcaaggccggcgccttcgat
gccatccaccagaaccgcgcggcgctggtggcatcgatcgacactgcgttcgagttcgcc
aatgccacgcatgccaacgccaaccagggcggcctgttcgacatgatgggcgacgacgcc
gtgggctcgagcacgcaggagcccgagctggccgagcgcctgccctggggcatcaaggag
cgtctcacgttcgagaagaccgccgtgggcttctatctctccggccatctgttcgatgag
gtcgagagcgaagtccggcgcttcgtgcgcacgcgcatcgaggagatgcgcgacagccgc
gagccgcaggtcatggccggcatcatcagcgacttccgcgccatcagcggccagcgcggg
cggctgggcctgttcaagatcgacgacaagtcgggcgtgatcgaggcttctgccgacgag
ggcgtgctcaacgcgcacaaggatctgctcaaggaggacgagttcgtcgtcgtcagcggc
cgtctgcagctcgaccacttcagcggcggcctgcgcatgaaggtgcagcagctgtggagc
ctgtccgatgcgcgctgcaagttcggacgctacctgcaggtgagcgtcggcgaggtcatg
cccgacgtgatccgcgtgctcggcgatttcccggcgcgccgcgtggagcaggaacaggcc
gaaccgctggtgcacggcctgcgcgtgcgcctgggcctgcgctgcgagtcgccgcagggt
gcggccaccgccgaactgcagctgggcgacaccagccgcttctaccccagcgacgcggcg
ctggccgcctggtcggcccaggcgggcagcggcaaggcggtggtcatctacgaatga
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